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Generalizing Simes' test and Hochberg's stepup procedure

Abstract

In a multiple testing problem where one is willing to tolerate a few false rejections, procedure controlling the familywise error rate (FWER) can potentially be improved in terms of its ability to detect false null hypotheses by generalizing it to control the kk-FWER, the probability of falsely rejecting at least kk null hypotheses, for some fixed k>1k>1. Simes' test for testing the intersection null hypothesis is generalized to control the kk-FWER weakly, that is, under the intersection null hypothesis, and Hochberg's stepup procedure for simultaneous testing of the individual null hypotheses is generalized to control the kk-FWER strongly, that is, under any configuration of the true and false null hypotheses. The proposed generalizations are developed utilizing joint null distributions of the kk-dimensional subsets of the pp-values, assumed to be identical. The generalized Simes' test is proved to control the kk-FWER weakly under the multivariate totally positive of order two (MTP2_2) condition [J. Multivariate Analysis 10 (1980) 467--498] of the joint null distribution of the pp-values by generalizing the original Simes' inequality. It is more powerful to detect kk or more false null hypotheses than the original Simes' test when the pp-values are independent. A stepdown procedure strongly controlling the kk-FWER, a version of generalized Holm's procedure that is different from and more powerful than [Ann. Statist. 33 (2005) 1138--1154] with independent pp-values, is derived before proposing the generalized Hochberg's procedure. The strong control of the kk-FWER for the generalized Hochberg's procedure is established in situations where the generalized Simes' test is known to control its kk-FWER weakly.

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