55
49

The space of ultrametric phylogenetic trees

Abstract

We introduce two metric spaces on ultrametric phylogenetic trees and compare them with existing models of tree space. We formulate several formal requirements that a metric space on phylogenetic trees must possess in order to be a satisfactory space for statistical analysis, and justify them. We show that only a few known constructions of the space of phylogenetic trees satisfy these requirements. However, our results suggest that these basic requirements are not enough to distinguish between the two metric spaces we introduce and that the choice between metric spaces requires additional properties to be considered.

View on arXiv
Comments on this paper