In this study, we introduce a new approach, the inverse Kalman filter (IKF), which enables accurate matrix-vector multiplication between a covariance matrix from a dynamic linear model and any real-valued vector with linear computational cost. We incorporate the IKF with the conjugate gradient algorithm, which substantially accelerates the computation of matrix inversion for a general form of covariance matrices, whereas other approximation approaches may not be directly applicable. We demonstrate the scalability and efficiency of the IKF approach through distinct applications, including nonparametric estimation of particle interaction functions and predicting incomplete lattices of correlated data, using both simulation and real-world observations, including cell trajectory and satellite radar interferogram.
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