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FunBench: Benchmarking Fundus Reading Skills of MLLMs

2 March 2025
Qijie Wei
Kaiheng Qian
Xirong Li
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Abstract

Multimodal Large Language Models (MLLMs) have shown significant potential in medical image analysis. However, their capabilities in interpreting fundus images, a critical skill for ophthalmology, remain under-evaluated. Existing benchmarks lack fine-grained task divisions and fail to provide modular analysis of its two key modules, i.e., large language model (LLM) and vision encoder (VE). This paper introduces FunBench, a novel visual question answering (VQA) benchmark designed to comprehensively evaluate MLLMs' fundus reading skills. FunBench features a hierarchical task organization across four levels (modality perception, anatomy perception, lesion analysis, and disease diagnosis). It also offers three targeted evaluation modes: linear-probe based VE evaluation, knowledge-prompted LLM evaluation, and holistic evaluation. Experiments on nine open-source MLLMs plus GPT-4o reveal significant deficiencies in fundus reading skills, particularly in basic tasks such as laterality recognition. The results highlight the limitations of current MLLMs and emphasize the need for domain-specific training and improved LLMs and VEs.

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@article{wei2025_2503.00901,
  title={ FunBench: Benchmarking Fundus Reading Skills of MLLMs },
  author={ Qijie Wei and Kaiheng Qian and Xirong Li },
  journal={arXiv preprint arXiv:2503.00901},
  year={ 2025 }
}
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