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Benchmarking Biopharmaceuticals Retrieval-Augmented Generation Evaluation

15 April 2025
Hanmeng Zhong
Linqing Chen
Weilei Wang
Wentao Wu
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Abstract

Recently, the application of the retrieval-augmented Large Language Models (LLMs) in specific domains has gained significant attention, especially in biopharmaceuticals. However, in this context, there is no benchmark specifically designed for biopharmaceuticals to evaluate LLMs. In this paper, we introduce the Biopharmaceuticals Retrieval-Augmented Generation Evaluation (BRAGE) , the first benchmark tailored for evaluating LLMs' Query and Reference Understanding Capability (QRUC) in the biopharmaceutical domain, available in English, French, German and Chinese. In addition, Traditional Question-Answering (QA) metrics like accuracy and exact match fall short in the open-ended retrieval-augmented QA scenarios. To address this, we propose a citation-based classification method to evaluate the QRUC of LLMs to understand the relationship between queries and references. We apply this method to evaluate the mainstream LLMs on BRAGE. Experimental results show that there is a significant gap in the biopharmaceutical QRUC of mainstream LLMs, and their QRUC needs to be improved.

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@article{zhong2025_2504.12342,
  title={ Benchmarking Biopharmaceuticals Retrieval-Augmented Generation Evaluation },
  author={ Hanmeng Zhong and Linqing Chen and Weilei Wang and Wentao Wu },
  journal={arXiv preprint arXiv:2504.12342},
  year={ 2025 }
}
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