phylodyn: an R package for phylodynamic simulation and inference

18 October 2016

Papers citing "phylodyn: an R package for phylodynamic simulation and inference"

5 / 5 papers shown

Title
Bayesian Inference of Reproduction Number from Epidemiological and Genetic Data Using Particle MCMC Alicia Gill Jere Koskela Xavier Didelot R. Everitt 33 4 0 16 Nov 2023
An Efficient Bayesian Inference Framework for Coalescent-Based Nonparametric Phylodynamics Shiwei Lan Julia A. Palacios Michael D. Karcher V. Minin Babak Shahbaba 58 36 0 29 Nov 2014
MCMC using Hamiltonian dynamics Radford M. Neal 354 3,287 0 09 Jun 2012
Split Hamiltonian Monte Carlo Babak Shahbaba Shiwei Lan W. Johnson Radford M. Neal 207 92 0 29 Jun 2011
Elliptical slice sampling Iain Murray Ryan P. Adams D. MacKay 201 465 0 31 Dec 2009