Fast and Accurate Tumor Segmentation of Histology Images using Persistent Homology and Deep Convolutional Features

9 May 2018

Talha Qaiser

Papers citing "Fast and Accurate Tumor Segmentation of Histology Images using Persistent Homology and Deep Convolutional Features"

31 / 31 papers shown

Title
PathoPainter: Augmenting Histopathology Segmentation via Tumor-aware Inpainting Hong Liu Haosen Yang Evi M. C. Huijben Mark Schuiveling Ruisheng Su J. Pluim M. Veta MedIm 98 1 0 06 Mar 2025
PI-Att: Topology Attention for Segmentation Networks through Adaptive Persistence Image Representation Mehmet Bahadir Erden S. Unver I. A. Gurses R. Turkay C. Gunduz-Demir 73 0 0 15 Aug 2024
Segmentation of Non-Small Cell Lung Carcinomas: Introducing DRU-Net and Multi-Lens Distortion Soroush Oskouei Marit Valla André Pedersen Erik Smistad V. G. Dale ... T. Langø M. Ramnefjell L. A. Akslen Gabriel Kiss H. Sorger 80 0 0 20 Jun 2024
WSI-SAM: Multi-resolution Segment Anything Model (SAM) for histopathology whole-slide images Hong Liu Haosen Yang P. Diest J. Pluim M. Veta VLM 90 8 0 14 Mar 2024
Train-Free Segmentation in MRI with Cubical Persistent Homology Anton François Raphael Tinarrage 3DV 57 2 0 02 Jan 2024
PHG-Net: Persistent Homology Guided Medical Image Classification Yao Peng Hongxiao Wang Milan Sonka Danny Z. Chen 59 4 0 28 Nov 2023
Topology-Aware Loss for Aorta and Great Vessel Segmentation in Computed Tomography Images Seher Ozcelik S. Unver I. A. Gurses R. Turkay Cigdem Demir 75 1 0 06 Jul 2023
A fast topological approach for predicting anomalies in time-varying graphs Umar Islambekov Hasani Pathirana O. Khormali Cüneyt Gürcan Akçora Ekaterina Smirnova 51 1 0 11 May 2023
Topology-Aware Focal Loss for 3D Image Segmentation Andac Demir Elie Massaad B. Kiziltan 73 9 0 24 Apr 2023
Masked Pre-Training of Transformers for Histology Image Analysis Shuai Jiang Liesbeth Hondelink A. Suriawinata Saeed Hassanpour MedIm 57 18 0 14 Apr 2023
Consistency Regularisation in Varying Contexts and Feature Perturbations for Semi-Supervised Semantic Segmentation of Histology Images R. M. S. Bashir Talha Qaiser S. Raza Nasir M. Rajpoot 60 14 0 30 Jan 2023
Rethinking Persistent Homology for Visual Recognition Ekaterina Khramtsova Guido Zuccon Xi Wang Mahsa Baktashmotlagh 40 5 0 09 Jul 2022
Glo-In-One: Holistic Glomerular Detection, Segmentation, and Lesion Characterization with Large-scale Web Image Mining Tianyuan Yao Yuzhe Lu Jun Long Aadarsh Jha Zheyu Zhu Zuhayr Asad Haichun Yang Agnes B. Fogo Yuankai Huo 81 10 0 31 May 2022
A review of machine learning approaches, challenges and prospects for computational tumor pathology Liangrui Pan Zhichao Feng Shaoliang Peng AI4CE 74 7 0 31 May 2022
AI-based Carcinoma Detection and Classification Using Histopathological Images: A Systematic Review Swathi C. Prabhu K. Prasad Antonio Robels-Kelly Xuequan Lu 108 40 0 18 Jan 2022
Hybrid guiding: A multi-resolution refinement approach for semantic segmentation of gigapixel histopathological images André Pedersen Erik Smistad T. V. Rise V. G. Dale H. S. Pettersen T. Nordmo D. Bouget Ingerid Reinertsen Marit Valla 67 3 0 07 Dec 2021
Multi-Layer Pseudo-Supervision for Histopathology Tissue Semantic Segmentation using Patch-level Classification Labels Chu Han Jiatai Lin Jinhai Mai Yi Wang Qingling Zhang ... Zeyan Xu Xiaomei Huang Guoqiang Han Chang-xiu Liang Zaiyi Liu 97 99 0 14 Oct 2021
Self-Rule to Multi-Adapt: Generalized Multi-source Feature Learning Using Unsupervised Domain Adaptation for Colorectal Cancer Tissue Detection C. Abbet Linda Studer Andreas Fischer H. Dawson I. Zlobec Behzad Bozorgtabar Jean-Philippe Thiran OOD 94 34 0 20 Aug 2021
SRPN: similarity-based region proposal networks for nuclei and cells detection in histology images Yibao Sun Xingru Huang Huiyu Zhou Qianni Zhang 75 33 0 25 Jun 2021
A digital score of tumour-associated stroma infiltrating lymphocytes predicts survival in head and neck squamous cell carcinoma Muhammad Shaban S. Raza Maria Hassan A. Jamshed S. Mushtaq ... N. Sharma M. Robinson H. Mehanna S. Khurram Nasir M. Rajpoot 17 32 0 16 Apr 2021
Classification of COVID-19 via Homology of CT-SCAN S. Iqbal H. Ahmed Talha Qaiser M. I. Qureshi Nasir M. Rajpoot 57 4 0 21 Feb 2021
Cycle Registration in Persistent Homology with Applications in Topological Bootstrap Yohai Reani O. Bobrowski 145 25 0 03 Jan 2021
SAFRON: Stitching Across the Frontier for Generating Colorectal Cancer Histology Images Srijay Deshpande F. Minhas S. Graham Nasir M. Rajpoot MedIm 46 8 0 11 Aug 2020
A deep learning based multiscale approach to segment cancer area in liver whole slide image Yanbo Feng A. Hafiane H. Laurent MedIm 44 3 0 25 Jul 2020
MeDaS: An open-source platform as service to help break the walls between medicine and informatics Liang Zhang Johann Li Ping Li Xiaoyuan Lu Peiyi Shen Guangming Zhu Syed Afaq Ali Shah Bennamoun Kun Qian Björn W. Schuller MedIm 59 6 0 12 Jul 2020
Deep neural network models for computational histopathology: A survey C. Srinidhi Ozan Ciga Anne L. Martel AI4CE 162 582 0 28 Dec 2019
Large-scale Gastric Cancer Screening and Localization Using Multi-task Deep Neural Network Hong Yu Xiaofan Zhang Ling-Jun Song Liren Jiang Xiaodi Huang ... Weiwei Sun Yangqiong Zhang Guangyi Peng Weiwei Shen Guohui Fu 73 13 0 09 Oct 2019
PathologyGAN: Learning deep representations of cancer tissue A. Quiros R. Murray-Smith Ke-Fei Yuan MedIm GAN 95 86 0 04 Jul 2019
Learning Where to See: A Novel Attention Model for Automated Immunohistochemical Scoring Talha Qaiser Nasir M. Rajpoot 62 71 0 26 Mar 2019
Stable Topological Summaries for Analyzing the Organization of Cells in a Packed Tissue N. Atienza M. Jiménez M. Soriano-Trigueros 16 4 0 18 Feb 2019
An introduction to Topological Data Analysis: fundamental and practical aspects for data scientists Frédéric Chazal Bertrand Michel 107 598 0 11 Oct 2017