MedMentions: A Large Biomedical Corpus Annotated with UMLS Concepts

25 February 2019

Papers citing "MedMentions: A Large Biomedical Corpus Annotated with UMLS Concepts"

21 / 21 papers shown

Title
Multimodal Large Language Models for Medicine: A Comprehensive Survey Jiarui Ye Hao Tang LM&MA 89 0 0 29 Apr 2025
MEG: Medical Knowledge-Augmented Large Language Models for Question Answering Laura Cabello Carmen Martin-Turrero Uchenna Akujuobi Anders Søgaard Carlos Bobed AI4MH 136 1 0 06 Nov 2024
MedINST: Meta Dataset of Biomedical Instructions Wenhan Han Meng Fang Zihan Zhang Yu Yin Zirui Song Ling-Hao Chen Mykola Pechenizkiy Qingyu Chen LM&MA 33 1 0 17 Oct 2024
KcMF: A Knowledge-compliant Framework for Schema and Entity Matching with Fine-tuning-free LLMs Yongqin Xu Huan Li Ke Chen Lidan Shou 47 2 0 16 Oct 2024
Generalizable and Scalable Multistage Biomedical Concept Normalization Leveraging Large Language Models Nicholas J. Dobbins 32 2 0 24 May 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions Taojun Hu Xiao-Hua Zhou ELM 38 12 0 14 Apr 2024
Biomedical Entity Linking with Triple-aware Pre-Training Xiongliang Yan Cedric Moller Ricardo Usbeck AI4CE 30 3 0 28 Aug 2023
Zshot: An Open-source Framework for Zero-Shot Named Entity Recognition and Relation Extraction Gabriele Picco Marcos Martínez Galindo Alberto Purpura Leopold Fuchs V. López T. Hoang VLM 13 6 0 25 Jul 2023
TempEL: Linking Dynamically Evolving and Newly Emerging Entities Klim Zaporojets Lucie-Aimée Kaffee Johannes Deleu Thomas Demeester Chris Develder Isabelle Augenstein KELM 33 15 0 05 Feb 2023
GLADIS: A General and Large Acronym Disambiguation Benchmark Lihu Chen Gaël Varoquaux Fabian M. Suchanek ELM 29 3 0 03 Feb 2023
Proxy-based Zero-Shot Entity Linking by Effective Candidate Retrieval Maciej Wiatrak Eirini Arvaniti Angus Brayne Jonas Vetterle Aaron Sim 25 2 0 30 Jan 2023
BioLORD: Learning Ontological Representations from Definitions (for Biomedical Concepts and their Textual Descriptions) François Remy Kris Demuynck Thomas Demeester 13 13 0 21 Oct 2022
BioBART: Pretraining and Evaluation of A Biomedical Generative Language Model Hongyi Yuan Zheng Yuan Ruyi Gan Jiaxing Zhang Yutao Xie Sheng Yu LM&MA 22 122 0 08 Apr 2022
Generating Scientific Claims for Zero-Shot Scientific Fact Checking Dustin Wright David Wadden Kyle Lo Bailey Kuehl Arman Cohan Isabelle Augenstein Lucy Lu Wang MedIm 45 54 0 24 Mar 2022
Kronecker Factorization for Preventing Catastrophic Forgetting in Large-scale Medical Entity Linking Denis Jered McInerney Luyang Kong Kristjan Arumae Byron C. Wallace Parminder Bhatia CLL 24 1 0 11 Nov 2021
BERT might be Overkill: A Tiny but Effective Biomedical Entity Linker based on Residual Convolutional Neural Networks T. Lai Heng Ji ChengXiang Zhai 27 31 0 06 Sep 2021
AMMU : A Survey of Transformer-based Biomedical Pretrained Language Models Katikapalli Subramanyam Kalyan A. Rajasekharan S. Sangeetha LM&MA MedIm 23 164 0 16 Apr 2021
How Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities? Hyunjae Kim Jaewoo Kang AI4CE 84 21 0 01 Jan 2021
Clustering-based Inference for Biomedical Entity Linking Rico Angell Nicholas Monath Sunil Mohan Nishant Yadav Andrew McCallum 33 4 0 21 Oct 2020
Multi-domain Clinical Natural Language Processing with MedCAT: the Medical Concept Annotation Toolkit Z. Kraljevic Thomas Searle Anthony Shek Lukasz Roguski Kawsar Noor ... A. Shah W. K. Wong Zina M. Ibrahim J. Teo Richard J. B. Dobson AI4MH 25 160 0 02 Oct 2020
CODA-19: Using a Non-Expert Crowd to Annotate Research Aspects on 10,000+ Abstracts in the COVID-19 Open Research Dataset Ting-Hao 'Kenneth' Huang Huang Chieh-Yang C. C. Ding Yen-Chia Hsu C. Lee Giles 23 14 0 05 May 2020