Nanopore Base Calling on the Edge

9 November 2020

Papers citing "Nanopore Base Calling on the Edge"

6 / 6 papers shown

Title
Two Sparse Matrices are Better than One: Sparsifying Neural Networks with Double Sparse Factorization Vladimír Boža Vladimír Macko 25 1 0 27 Sep 2024
TargetCall: Eliminating the Wasted Computation in Basecalling via Pre-Basecalling Filtering Meryem Banu Cavlak Gagandeep Singh M. Alser Can Firtina Joel Lindegger Mohammad Sadrosadati Nika Mansouri-Ghiasi C. Alkan O. Mutlu 22 10 0 09 Dec 2022
RUBICON: A Framework for Designing Efficient Deep Learning-Based Genomic Basecallers Gagandeep Singh M. Alser K. Denolf Can Firtina Alireza Khodamoradi Meryem Banu Cavlak Henk Corporaal O. Mutlu 38 12 0 06 Nov 2022
DNA data storage, sequencing data-carrying DNA Jasmine Quah Omer S. Sella T. Heinis SyDa 13 1 0 11 May 2022
GenStore: A High-Performance and Energy-Efficient In-Storage Computing System for Genome Sequence Analysis Nika Mansouri-Ghiasi Jisung Park Harun Mustafa Jeremie S. Kim Ataberk Olgun ... N. Alserr Rachata Ausavarungnirun Nandita Vijaykumar M. Alser O. Mutlu 23 28 0 21 Feb 2022
Dynamic Pooling Improves Nanopore Base Calling Accuracy V. Boža Peter Perešíni Broňa Brejová T. Vinař 17 4 0 16 May 2021