Biomedical Named Entity Recognition at Scale

12 November 2020

Papers citing "Biomedical Named Entity Recognition at Scale"

28 / 28 papers shown

Title
Improving Natural Language Understanding for LLMs via Large-Scale Instruction Synthesis Lin Yuan Jun Xu Honghao Gui Mengshu Sun Zhiqiang Zhang Lei Liang Jun Zhou AI4CE 206 0 0 06 Feb 2025
RUIE: Retrieval-based Unified Information Extraction using Large Language Model Xincheng Liao Junwen Duan Yixi Huang Jianxin Wang 40 1 0 18 Sep 2024
LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction Aishik Nagar Viktor Schlegel Thanh-Tung Nguyen Hao Li Yuping Wu Kuluhan Binici Stefan Winkler LRM 35 3 0 22 Aug 2024
Beyond Boundaries: Learning a Universal Entity Taxonomy across Datasets and Languages for Open Named Entity Recognition Yuming Yang Wantong Zhao Caishuang Huang Junjie Ye Xiao Wang ... Kaixin Huang Yunke Zhang Tao Gui Qi Zhang Xuanjing Huang 36 3 0 17 Jun 2024
KnowCoder: Coding Structured Knowledge into LLMs for Universal Information Extraction Zixuan Li Yutao Zeng Yuxin Zuo Weicheng Ren Wenxuan Liu ... Yidan Liu Pan Yang Xiaolong Jin Jiafeng Guo Xueqi Cheng OffRL 25 24 0 12 Mar 2024
DistALANER: Distantly Supervised Active Learning Augmented Named Entity Recognition in the Open Source Software Ecosystem Somnath Banerjee Avik Dutta Aaditya Agrawal Rima Hazra Animesh Mukherjee 24 2 0 25 Feb 2024
IEPile: Unearthing Large-Scale Schema-Based Information Extraction Corpus Honghao Gui Lin Yuan Hongbin Ye Ningyu Zhang Mengshu Sun Lei Liang Huajun Chen 28 10 0 22 Feb 2024
HunFlair2 in a cross-corpus evaluation of biomedical named entity recognition and normalization tools Mario Sanger Samuele Garda Xing David Wang Leon Weber-Genzel Pia Droop Benedikt Fuchs Alan Akbik Ulf Leser 35 6 0 19 Feb 2024
Named Entity Recognition Under Domain Shift via Metric Learning for Life Sciences Hongyi Liu Qingyun Wang Payam Karisani Heng Ji 16 1 0 19 Jan 2024
Beyond Accuracy: Automated De-Identification of Large Real-World Clinical Text Datasets Veysel Kocaman H. Haq D. Talby 27 1 0 13 Dec 2023
Mirror: A Universal Framework for Various Information Extraction Tasks Tong Zhu Junfei Ren Zijian Yu Mengsong Wu Guoliang Zhang Xiaoye Qu Wenliang Chen Zhefeng Wang Baoxing Huai Min Zhang 29 14 0 09 Nov 2023
GoLLIE: Annotation Guidelines improve Zero-Shot Information-Extraction Oscar Sainz Iker García-Ferrero Rodrigo Agerri Oier López de Lacalle German Rigau Eneko Agirre 30 75 0 05 Oct 2023
JsonTuning: Towards Generalizable, Robust, and Controllable Instruction Tuning Chang Gao Wenxuan Zhang Guizhen Chen Wai Lam 55 5 0 04 Oct 2023
Iteratively Improving Biomedical Entity Linking and Event Extraction via Hard Expectation-Maximization Xiaochu Li Minqian Liu Zhiyang Xu Lifu Huang 22 0 0 24 May 2023
Biomedical Named Entity Recognition via Dictionary-based Synonym Generalization Z. Fu Yixuan Su Zaiqiao Meng Nigel Collier MedIm 27 3 0 22 May 2023
InstructIE: A Bilingual Instruction-based Information Extraction Dataset Honghao Gui Shuofei Qiao Jintian Zhang Hongbin Ye Mengshu Sun Lei Liang Jeff Z. Pan Huajun Chen Ningyu Zhang 26 7 0 19 May 2023
BioAug: Conditional Generation based Data Augmentation for Low-Resource Biomedical NER Sreyan Ghosh Utkarsh Tyagi Sonal Kumar Dinesh Manocha MedIm 26 10 0 18 May 2023
InstructUIE: Multi-task Instruction Tuning for Unified Information Extraction Xiao Wang Wei Zhou Can Zu Han Xia Tianze Chen ... Tao Gui Jihua Kang J. Yang Siyuan Li Chunsai Du 31 146 0 17 Apr 2023
Win-Win Cooperation: Bundling Sequence and Span Models for Named Entity Recognition Bin Ji Shasha Li Jie Yu Jun Ma Huijun Liu 27 2 0 07 Jul 2022
Multilinguals at SemEval-2022 Task 11: Transformer Based Architecture for Complex NER Amit Pandey Swayatta Daw Vikram Pudi 22 3 0 05 Apr 2022
Entity-driven Fact-aware Abstractive Summarization of Biomedical Literature Amanuel Alambo Tanvi Banerjee K. Thirunarayan M. Raymer MedIm 13 7 0 30 Mar 2022
Understanding COVID-19 News Coverage using Medical NLP A. Varol Veysel Kocaman H. Haq D. Talby 43 8 0 19 Mar 2022
Mining Adverse Drug Reactions from Unstructured Mediums at Scale H. Haq Veysel Kocaman D. Talby 12 11 0 05 Jan 2022
Context-NER : Contextual Phrase Generation at Scale Himanshu Gupta Shreyas Verma Santosh Mashetty Swaroop Mishra 19 10 0 16 Sep 2021
ELECTRAMed: a new pre-trained language representation model for biomedical NLP Giacomo Miolo Giulio Mantoan C. Orsenigo 11 24 0 19 Apr 2021
Spark NLP: Natural Language Understanding at Scale Veysel Kocaman D. Talby 37 66 0 26 Jan 2021
A disciplined approach to neural network hyper-parameters: Part 1 -- learning rate, batch size, momentum, and weight decay L. Smith 208 1,019 0 26 Mar 2018
Efficient Estimation of Word Representations in Vector Space Tomáš Mikolov Kai Chen G. Corrado J. Dean 3DV 239 31,257 0 16 Jan 2013