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2011.06315
Cited By
Biomedical Named Entity Recognition at Scale
12 November 2020
Veysel Kocaman
D. Talby
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Papers citing
"Biomedical Named Entity Recognition at Scale"
29 / 29 papers shown
Multilingual Clinical NER for Diseases and Medications Recognition in Cardiology Texts using BERT Embeddings
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George Marica
C. Suciu
Lucian Mihai Itu
Oladimeji Farri
244
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Wenxuan Liu
Long Bai
Chunmao Zhang
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Bingbing Xu
Xuhui Jiang
Xiaolong Jin
Jiafeng Guo
Xueqi Cheng
242
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Improving Natural Language Understanding for LLMs via Large-Scale Instruction Synthesis
AAAI Conference on Artificial Intelligence (AAAI), 2025
Lin Yuan
Jun Xu
Honghao Gui
Mengshu Sun
Qing Cui
Lei Liang
Jun Zhou
AI4CE
915
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0
06 Feb 2025
KnowCoder-X: Boosting Multilingual Information Extraction via Code
Annual Meeting of the Association for Computational Linguistics (ACL), 2024
Yuxin Zuo
Wenxuan Jiang
Wenxuan Liu
Hui Yuan
Long Bai
Hanbin Wang
Yutao Zeng
Xiaolong Jin
Jiafeng Guo
Xueqi Cheng
382
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0
07 Nov 2024
RUIE: Retrieval-based Unified Information Extraction using Large Language Model
International Conference on Computational Linguistics (COLING), 2024
Xincheng Liao
Junwen Duan
Yixi Huang
Jianxin Wang
482
5
0
18 Sep 2024
LLMs are not Zero-Shot Reasoners for Biomedical Information Extraction
Aishik Nagar
Viktor Schlegel
Thanh-Tung Nguyen
Hao Li
Yuping Wu
Kuluhan Binici
Stefan Winkler
LRM
557
15
0
22 Aug 2024
Beyond Boundaries: Learning a Universal Entity Taxonomy across Datasets and Languages for Open Named Entity Recognition
Yuming Yang
Wantong Zhao
Jessica Fan
Junjie Ye
Xiao Wang
...
Kaixin Huang
Yunke Zhang
Tao Gui
Qi Zhang
Xuanjing Huang
510
8
0
17 Jun 2024
KnowCoder: Coding Structured Knowledge into LLMs for Universal Information Extraction
Annual Meeting of the Association for Computational Linguistics (ACL), 2024
Zixuan Li
Yutao Zeng
Yuxin Zuo
Weicheng Ren
Wenxuan Liu
...
Yidan Liu
Pan Yang
Xiaolong Jin
Jiafeng Guo
Xueqi Cheng
OffRL
403
64
0
12 Mar 2024
DistALANER: Distantly Supervised Active Learning Augmented Named Entity Recognition in the Open Source Software Ecosystem
Somnath Banerjee
Avik Dutta
Aaditya Agrawal
Rima Hazra
Animesh Mukherjee
487
2
0
25 Feb 2024
IEPile: Unearthing Large-Scale Schema-Based Information Extraction Corpus
Honghao Gui
Lin Yuan
Hongbin Ye
Ningyu Zhang
Mengshu Sun
Lei Liang
Huajun Chen
427
20
0
22 Feb 2024
HunFlair2 in a cross-corpus evaluation of biomedical named entity recognition and normalization tools
Mario Sanger
Samuele Garda
Xing David Wang
Leon Weber-Genzel
Pia Droop
Benedikt Fuchs
Alan Akbik
Ulf Leser
384
21
0
19 Feb 2024
Named Entity Recognition Under Domain Shift via Metric Learning for Life Sciences
Hongyi Liu
Qingyun Wang
Payam Karisani
Heng Ji
316
5
0
19 Jan 2024
Beyond Accuracy: Automated De-Identification of Large Real-World Clinical Text Datasets
Veysel Kocaman
H. Haq
D. Talby
162
4
0
13 Dec 2023
Mirror: A Universal Framework for Various Information Extraction Tasks
Tong Zhu
Junfei Ren
Zijian Yu
Mengsong Wu
Guoliang Zhang
Xiaoye Qu
Wenliang Chen
Zhefeng Wang
Baoxing Huai
Min Zhang
413
20
0
09 Nov 2023
GoLLIE: Annotation Guidelines improve Zero-Shot Information-Extraction
International Conference on Learning Representations (ICLR), 2023
Oscar Sainz
Iker García-Ferrero
Rodrigo Agerri
Oier López de Lacalle
German Rigau
Eneko Agirre
802
157
0
05 Oct 2023
JsonTuning: Towards Generalizable, Robust, and Controllable Instruction Tuning
Annual Meeting of the Association for Computational Linguistics (ACL), 2023
Chang Gao
Wenxuan Zhang
Guizhen Chen
Wai Lam
838
8
0
04 Oct 2023
Iteratively Improving Biomedical Entity Linking and Event Extraction via Hard Expectation-Maximization
Xiaochu Li
Minqian Liu
Zhiyang Xu
Lifu Huang
200
0
0
24 May 2023
Biomedical Named Entity Recognition via Dictionary-based Synonym Generalization
Conference on Empirical Methods in Natural Language Processing (EMNLP), 2023
Z. Fu
Yixuan Su
Zaiqiao Meng
Nigel Collier
MedIm
313
10
0
22 May 2023
InstructIE: A Bilingual Instruction-based Information Extraction Dataset
International Workshop on the Semantic Web (SW), 2023
Honghao Gui
Shuofei Qiao
Jintian Zhang
Hongbin Ye
Mengshu Sun
Lei Liang
Jeff Z. Pan
Huajun Chen
Ningyu Zhang
313
17
0
19 May 2023
BioAug: Conditional Generation based Data Augmentation for Low-Resource Biomedical NER
Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR), 2023
Sreyan Ghosh
Utkarsh Tyagi
Sonal Kumar
Dinesh Manocha
MedIm
278
17
0
18 May 2023
InstructUIE: Multi-task Instruction Tuning for Unified Information Extraction
Xiao Wang
Wei Zhou
Can Zu
Han Xia
Tianze Chen
...
Tao Gui
Jihua Kang
J. Yang
Siyuan Li
Chunsai Du
348
247
0
17 Apr 2023
Win-Win Cooperation: Bundling Sequence and Span Models for Named Entity Recognition
IEEE Transactions on Knowledge and Data Engineering (TKDE), 2022
Shezheng Song
Shasha Li
Jie Yu
Jun Ma
Bin Ji
305
2
0
07 Jul 2022
Multilinguals at SemEval-2022 Task 11: Transformer Based Architecture for Complex NER
International Workshop on Semantic Evaluation (SemEval), 2022
Amit Pandey
Swayatta Daw
Vikram Pudi
190
3
0
05 Apr 2022
Entity-driven Fact-aware Abstractive Summarization of Biomedical Literature
International Conference on Pattern Recognition (ICPR), 2022
Amanuel Alambo
Tanvi Banerjee
K. Thirunarayan
M. Raymer
MedIm
210
11
0
30 Mar 2022
Understanding COVID-19 News Coverage using Medical NLP
A. Varol
Veysel Kocaman
H. Haq
D. Talby
210
8
0
19 Mar 2022
Mining Adverse Drug Reactions from Unstructured Mediums at Scale
H. Haq
Veysel Kocaman
D. Talby
272
13
0
05 Jan 2022
Context-NER : Contextual Phrase Generation at Scale
Himanshu Gupta
Shreyas Verma
Santosh Mashetty
Swaroop Mishra
425
12
0
16 Sep 2021
ELECTRAMed: a new pre-trained language representation model for biomedical NLP
Giacomo Miolo
Giulio Mantoan
C. Orsenigo
306
26
0
19 Apr 2021
Spark NLP: Natural Language Understanding at Scale
Veysel Kocaman
D. Talby
207
74
0
26 Jan 2021
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