Self-supervised Graph-level Representation Learning with Local and Global Structure

8 June 2021

Jian Tang

Papers citing "Self-supervised Graph-level Representation Learning with Local and Global Structure"

36 / 36 papers shown

Title
Multi-Modal Molecular Representation Learning via Structure Awareness Rong Yin Ruyue Liu Xiaoshuai Hao Xingrui Zhou Y. Liu Can Ma Weiping Wang 29 0 0 09 May 2025
Mamba-Based Graph Convolutional Networks: Tackling Over-smoothing with Selective State Space Xin He Y. Wang Wenqi Fan Xu Shen Xin Juan Rui Miao Xin Wang 68 0 0 26 Jan 2025
Towards Graph Foundation Models: A Study on the Generalization of Positional and Structural Encodings Billy Joe Franks Moshe Eliasof Semih Cantürk Guy Wolf Carola-Bibiane Schönlieb Sophie Fellenz Marius Kloft AI4CE 76 0 0 10 Dec 2024
Learning to Model Graph Structural Information on MLPs via Graph Structure Self-Contrasting Lirong Wu Haitao Lin Guojiang Zhao Cheng Tan Stan Z. Li 21 0 0 09 Sep 2024
Invariant Graph Learning Meets Information Bottleneck for Out-of-Distribution Generalization Wenyu Mao Jiancan Wu Haoyang Liu Yongduo Sui Xiang Wang OOD 37 2 0 03 Aug 2024
Where to Mask: Structure-Guided Masking for Graph Masked Autoencoders Chuang Liu Yuyao Wang Yibing Zhan Xueqi Ma Dapeng Tao Jia Wu Wenbin Hu 49 4 0 24 Apr 2024
Delayed Bottlenecking: Alleviating Forgetting in Pre-trained Graph Neural Networks Zhe Zhao Pengkun Wang Xu Wang Haibin Wen Xiaolong Xie Zhengyang Zhou Qingfu Zhang Yang Wang AI4CE CLL 20 0 0 23 Apr 2024
Robust Training of Temporal GNNs using Nearest Neighbours based Hard Negatives Shubham Gupta Srikanta J. Bedathur OOD 26 1 0 14 Feb 2024
Empowering Dual-Level Graph Self-Supervised Pretraining with Motif Discovery Pengwei Yan Kaisong Song Zhuoren Jiang Yangyang Kang Tianqianjin Lin Changlong Sun Xiaozhong Liu AI4CE 23 2 0 19 Dec 2023
Removing Biases from Molecular Representations via Information Maximization Chenyu Wang Sharut Gupta Caroline Uhler Tommi Jaakkola 15 4 0 01 Dec 2023
Improving Self-supervised Molecular Representation Learning using Persistent Homology Yuankai Luo Lei Shi Veronika Thost SSL 26 8 0 29 Nov 2023
Motif-aware Attribute Masking for Molecular Graph Pre-training Eric Inae Gang Liu Meng-Long Jiang AI4CE 40 14 0 08 Sep 2023
Atomic and Subgraph-aware Bilateral Aggregation for Molecular Representation Learning Jiahao Chen Yurou Liu Jiangmeng Li Bing-Huang Su Jirong Wen 16 0 0 22 May 2023
Molecular Property Prediction by Semantic-invariant Contrastive Learning Ziqiao Zhang Ailin Xie Jihong Guan Shuigeng Zhou 19 5 0 13 Mar 2023
Activity Cliff Prediction: Dataset and Benchmark Ziqiao Zhang Bangyi Zhao Ailin Xie Yatao Bian Shuigeng Zhou 14 10 0 15 Feb 2023
Affinity Uncertainty-based Hard Negative Mining in Graph Contrastive Learning Chaoxi Niu Guansong Pang Ling-Hao Chen 24 9 0 31 Jan 2023
SeeGera: Self-supervised Semi-implicit Graph Variational Auto-encoders with Masking Xiang Li Tiandi Ye Caihua Shan Dongsheng Li Ming Gao SSL 26 30 0 29 Jan 2023
Task-Agnostic Graph Neural Network Evaluation via Adversarial Collaboration Xiangyu Zhao Hannes Stärk Dominique Beaini Yiren Zhao Pietro Lio' 24 0 0 27 Jan 2023
Hyperbolic Hierarchical Contrastive Hashing Rukai Wei Yu Liu Jingkuan Song Yanzhao Xie Ke Zhou 24 7 0 17 Dec 2022
Transductive Linear Probing: A Novel Framework for Few-Shot Node Classification Zhen Tan Song Wang Kaize Ding Jundong Li Huan Liu 24 26 0 11 Dec 2022
GLCC: A General Framework for Graph-Level Clustering Wei Ju Yiyang Gu Binqi Chen Gongbo Sun Yifang Qin Xing Liu Xiao Luo Ming Zhang 27 39 0 21 Oct 2022
Graph Contrastive Learning with Cross-view Reconstruction Qianlong Wen Z. Ouyang Chunhui Zhang Y. Qian Yanfang Ye Chuxu Zhang SSL 15 6 0 16 Sep 2022
Diffusion Models: A Comprehensive Survey of Methods and Applications Ling Yang Zhilong Zhang Yingxia Shao Shenda Hong Runsheng Xu Yue Zhao Wentao Zhang Bin Cui Ming-Hsuan Yang DiffM MedIm 224 1,300 0 02 Sep 2022
Analyzing Data-Centric Properties for Graph Contrastive Learning Puja Trivedi Ekdeep Singh Lubana Mark Heimann Danai Koutra Jayaraman J. Thiagarajan 26 11 0 04 Aug 2022
Let Invariant Rationale Discovery Inspire Graph Contrastive Learning Sihang Li Xiang Wang An Zhang Y. Wu Xiangnan He Tat-Seng Chua 19 93 0 16 Jun 2022
GraphMAE: Self-Supervised Masked Graph Autoencoders Zhenyu Hou Xiao Liu Yukuo Cen Yuxiao Dong Hongxia Yang C. Wang Jie Tang SSL 42 544 0 22 May 2022
Neural Graph Matching for Pre-training Graph Neural Networks Yupeng Hou Binbin Hu Wayne Xin Zhao Zhiqiang Zhang Jun Zhou Jianzhong Wen 10 8 0 03 Mar 2022
Eliciting Structural and Semantic Global Knowledge in Unsupervised Graph Contrastive Learning Kaize Ding Yancheng Wang Yingzhen Yang Huan Liu 25 22 0 17 Feb 2022
A Survey of Pretraining on Graphs: Taxonomy, Methods, and Applications Jun-Xiong Xia Yanqiao Zhu Yuanqi Du Stan Z. Li VLM 30 41 0 16 Feb 2022
A Self-supervised Mixed-curvature Graph Neural Network Li Sun Zhongbao Zhang Junda Ye Hao Peng Jiawei Zhang Sen Su Philip S. Yu SSL 28 33 0 10 Dec 2021
GBK-GNN: Gated Bi-Kernel Graph Neural Networks for Modeling Both Homophily and Heterophily Lun Du Xiaozhou Shi Qiang Fu Xiaojun Ma Hengyu Liu Shi Han Dongmei Zhang 25 104 0 29 Oct 2021
3D Infomax improves GNNs for Molecular Property Prediction Hannes Stärk Dominique Beaini Gabriele Corso Prudencio Tossou Christian Dallago Stephan Günnemann Pietro Lió AI4CE 25 203 0 08 Oct 2021
Pre-training Molecular Graph Representation with 3D Geometry Shengchao Liu Hanchen Wang Weiyang Liu Joan Lasenby Hongyu Guo Jian Tang 112 302 0 07 Oct 2021
Prototypical Graph Contrastive Learning Shuai Lin Pan Zhou Zi-Yuan Hu Shuojia Wang Ruihui Zhao Yefeng Zheng Liang Lin Eric P. Xing Xiaodan Liang 16 86 0 17 Jun 2021
GraphTheta: A Distributed Graph Neural Network Learning System With Flexible Training Strategy Yongchao Liu Houyi Li Guowei Zhang Xintan Zeng Yongyong Li ... Peng Zhang Zhao Li Kefeng Deng Changhua He Wenguang Chen GNN 42 11 0 21 Apr 2021
MoleculeNet: A Benchmark for Molecular Machine Learning Zhenqin Wu Bharath Ramsundar Evan N. Feinberg Joseph Gomes C. Geniesse Aneesh S. Pappu K. Leswing Vijay S. Pande OOD 162 1,775 0 02 Mar 2017