FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours

2 March 2022

Yang You

Papers citing "FastFold: Reducing AlphaFold Training Time from 11 Days to 67 Hours"

8 / 8 papers shown

Title
WallFacer: Guiding Transformer Model Training Out of the Long-Context Dark Forest with N-body Problem Ziming Liu Shaoyu Wang Shenggan Cheng Zhongkai Zhao Xuanlei Zhao James Demmel Yang You 19 0 0 30 Jun 2024
ScaleFold: Reducing AlphaFold Initial Training Time to 10 Hours Feiwen Zhu Arkadiusz Nowaczynski Rundong Li Jie Xin Yifei Song Michal Marcinkiewicz S. Eryilmaz June Yang M. Andersch 21 4 0 17 Apr 2024
Solvent: A Framework for Protein Folding Jaemyung Lee Kyeongtak Han Jaehoon Kim Hasun Yu Youhan Lee 14 1 0 07 Jul 2023
Large AI Models in Health Informatics: Applications, Challenges, and the Future Jianing Qiu Lin Li Jiankai Sun Jiachuan Peng Peilun Shi ... Bo Xiao Wu Yuan Ningli Wang Dong Xu Benny P. L. Lo AI4MH LM&MA 38 123 0 21 Mar 2023
SuperScaler: Supporting Flexible DNN Parallelization via a Unified Abstraction Zhiqi Lin Youshan Miao Guodong Liu Xiaoxiang Shi Quanlu Zhang ... Xu Cao Cheng-Wu Li Mao Yang Lintao Zhang Lidong Zhou 8 6 0 21 Jan 2023
Protein Language Models and Structure Prediction: Connection and Progression Bozhen Hu Jun-Xiong Xia Jiangbin Zheng Cheng Tan Yufei Huang Yongjie Xu Stan Z. Li 16 38 0 30 Nov 2022
Efficient AlphaFold2 Training using Parallel Evoformer and Branch Parallelism Guoxia Wang Zhihua Wu Xiaomin Fang Yingfei Xiang Yiqun Liu Dianhai Yu Yanjun Ma 11 0 0 01 Nov 2022
HelixFold: An Efficient Implementation of AlphaFold2 using PaddlePaddle Guoxia Wang Xiaomin Fang Zhihua Wu Yiqun Liu Yang Xue Yingfei Xiang Dianhai Yu Fan Wang Yanjun Ma 17 30 0 12 Jul 2022