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Mitosis domain generalization in histopathology images -- The MIDOG
  challenge

Mitosis domain generalization in histopathology images -- The MIDOG challenge

6 April 2022
Marc Aubreville
N. Stathonikos
C. Bertram
Robert Klopleisch
N. T. ter Hoeve
F. Ciompi
Frauke Wilm
Christian Marzahl
T. Donovan
Andreas K. Maier
Jack Breen
Nishant Ravikumar
Youjin Chung
Jinah Park
R. Nateghi
Fattane Pourakpour
Rutger Fick
S. Hadj
Mostafa Jahanifar
Nasir M. Rajpoot
Jakob Dexl
Thomas Wittenberg
Satoshi Kondo
Maxime W. Lafarge
V. Koelzer
Jingtang Liang
Yubo Wang
Xing-an Long
Jingxin Liu
Salar Razavi
A. Khademi
Sen Yang
Xiyue Wang
M. Veta
Katharina Breininger
ArXivPDFHTML

Papers citing "Mitosis domain generalization in histopathology images -- The MIDOG challenge"

44 / 44 papers shown
Title
Equivariant Imaging Biomarkers for Robust Unsupervised Segmentation of Histopathology
Equivariant Imaging Biomarkers for Robust Unsupervised Segmentation of Histopathology
Fuyao Chen
Yuexi Du
Tal Zeevi
Nicha Dvornek
John Onofrey
21
0
0
08 May 2025
When Two Wrongs Don't Make a Right" -- Examining Confirmation Bias and
  the Role of Time Pressure During Human-AI Collaboration in Computational
  Pathology
When Two Wrongs Don't Make a Right" -- Examining Confirmation Bias and the Role of Time Pressure During Human-AI Collaboration in Computational Pathology
Emely Rosbach
Jonas Ammeling
S. Krügel
Angelika Kießig
Alexis Fritz
...
N. Stathonikos
Matthias W. Uhl
C. Bertram
Andreas Riener
Marc Aubreville
43
1
0
01 Nov 2024
Cross-Organ and Cross-Scanner Adenocarcinoma Segmentation using Rein to
  Fine-tune Vision Foundation Models
Cross-Organ and Cross-Scanner Adenocarcinoma Segmentation using Rein to Fine-tune Vision Foundation Models
Pengzhou Cai
Xueyuan Zhang
Libin Lan
Ze Zhao
30
0
0
18 Sep 2024
Tissue Concepts: supervised foundation models in computational pathology
Tissue Concepts: supervised foundation models in computational pathology
Till Nicke
Jan Raphael Schaefer
Henning Hoefener
Friedrich Feuerhake
Dorit Merhof
Fabian Kiessling
Johannes Lotz
MedIm
42
0
0
05 Sep 2024
Leveraging image captions for selective whole slide image annotation
Leveraging image captions for selective whole slide image annotation
Jingna Qiu
Marc Aubreville
Frauke Wilm
Mathias Öttl
Jonas Utz
M. Schlereth
Katharina Breininger
23
0
0
08 Jul 2024
Re-identification from histopathology images
Re-identification from histopathology images
J. Ganz
Jonas Ammeling
Samir Jabari
Katharina Breininger
Marc Aubreville
29
1
0
19 Mar 2024
Rethinking U-net Skip Connections for Biomedical Image Segmentation
Rethinking U-net Skip Connections for Biomedical Image Segmentation
Frauke Wilm
Jonas Ammeling
Mathias Öttl
Rutger Fick
Marc Aubreville
Katharina Breininger
OOD
SSeg
15
4
0
13 Feb 2024
Deep Learning model predicts the c-Kit-11 mutational status of canine
  cutaneous mast cell tumors by HE stained histological slides
Deep Learning model predicts the c-Kit-11 mutational status of canine cutaneous mast cell tumors by HE stained histological slides
C. Puget
J. Ganz
J. Ostermaier
T. Konrad
E. Parlak
C. Bertram
M. Kiupel
Katharina Breininger
Marc Aubreville
R. Klopfleisch
MedIm
11
0
0
02 Jan 2024
Artificial Intelligence for Digital and Computational Pathology
Artificial Intelligence for Digital and Computational Pathology
Andrew H. Song
Guillaume Jaume
Drew F. K. Williamson
Ming Y. Lu
Anurag J. Vaidya
Tiffany R. Miller
Faisal Mahmood
AI4CE
30
129
0
13 Dec 2023
Automated Volume Corrected Mitotic Index Calculation Through
  Annotation-Free Deep Learning using Immunohistochemistry as Reference
  Standard
Automated Volume Corrected Mitotic Index Calculation Through Annotation-Free Deep Learning using Immunohistochemistry as Reference Standard
Jonas Ammeling
Moritz Hecker
J. Ganz
T. Donovan
C. Bertram
Katharina Breininger
Marc Aubreville
19
0
0
15 Nov 2023
Stain Consistency Learning: Handling Stain Variation for Automatic
  Digital Pathology Segmentation
Stain Consistency Learning: Handling Stain Variation for Automatic Digital Pathology Segmentation
Michael Yeung
Todd Watts
Sean YW Tan
Pedro F. Ferreira
Andrew D. Scott
S. Nielles-Vallespin
Guang Yang
18
0
0
11 Nov 2023
An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in
  Breast Cancer
An Automated Pipeline for Tumour-Infiltrating Lymphocyte Scoring in Breast Cancer
A. Shephard
Mostafa Jahanifar
Ruoyu Wang
Muhammad Dawood
Simon Graham
K. Sidlauskas
S. Khurram
Nasir M. Rajpoot
S. Raza
11
4
0
10 Nov 2023
Transformer-based Model for Oral Epithelial Dysplasia Segmentation
Transformer-based Model for Oral Epithelial Dysplasia Segmentation
A. Shephard
H. Mahmood
S. Raza
A. L. D. Araújo
A. Santos-Silva
...
Jill M Brooks
P. Nankivell
H. Mehanna
S. Khurram
Nasir M. Rajpoot
MedIm
17
1
0
09 Nov 2023
Histopathological Image Analysis with Style-Augmented Feature Domain
  Mixing for Improved Generalization
Histopathological Image Analysis with Style-Augmented Feature Domain Mixing for Improved Generalization
Vaibhav Khamankar
Sutanu Bera
Saumik Bhattacharya
Debashis Sen
P. Biswas
19
2
0
31 Oct 2023
Domain Generalization in Computational Pathology: Survey and Guidelines
Domain Generalization in Computational Pathology: Survey and Guidelines
Mostafa Jahanifar
M. Raza
Kesi Xu
T. Vuong
R. Jewsbury
...
Neda Zamanitajeddin
Jin Tae Kwak
S. Raza
F. Minhas
Nasir M. Rajpoot
OOD
26
17
0
30 Oct 2023
Domain-specific optimization and diverse evaluation of self-supervised
  models for histopathology
Domain-specific optimization and diverse evaluation of self-supervised models for histopathology
Jeremy Lai
Faruk Ahmed
Supriya Vijay
Tiam Jaroensri
Jessica Loo
...
Jonathan Krause
Yun-hui Liu
Po-Hsuan Cameron Chen
Ellery Wulczyn
David F. Steiner
33
7
0
20 Oct 2023
Improving mitosis detection on histopathology images using large
  vision-language models
Improving mitosis detection on histopathology images using large vision-language models
Ruiwen Ding
James Hall
Neil Tenenholtz
Kristen Severson
VLM
38
4
0
11 Oct 2023
Data efficient deep learning for medical image analysis: A survey
Data efficient deep learning for medical image analysis: A survey
Suruchi Kumari
Pravendra Singh
32
12
0
10 Oct 2023
Characterizing the Features of Mitotic Figures Using a Conditional
  Diffusion Probabilistic Model
Characterizing the Features of Mitotic Figures Using a Conditional Diffusion Probabilistic Model
C. D. Bahadir
B. Liechty
D.J. Pisapia
M. Sabuncu
DiffM
13
0
0
05 Oct 2023
Domain Generalization for Medical Image Analysis: A Survey
Domain Generalization for Medical Image Analysis: A Survey
Jee Seok Yoon
Kwanseok Oh
Yooseung Shin
Maciej A Mazurowski
Heung-Il Suk
LM&MA
OOD
35
4
0
05 Oct 2023
Domain generalization across tumor types, laboratories, and species --
  insights from the 2022 edition of the Mitosis Domain Generalization Challenge
Domain generalization across tumor types, laboratories, and species -- insights from the 2022 edition of the Mitosis Domain Generalization Challenge
Marc Aubreville
N. Stathonikos
T. Donovan
R. Klopfleisch
J. Ganz
...
Yongbing Zhang
Sen Yang
Xiyue Wang
Katharina Breininger
C. Bertram
30
16
0
27 Sep 2023
DARC: Distribution-Aware Re-Coloring Model for Generalizable Nucleus
  Segmentation
DARC: Distribution-Aware Re-Coloring Model for Generalizable Nucleus Segmentation
Shengcong Chen
Changxing Ding
Dacheng Tao
Hao Chen
25
1
0
01 Sep 2023
MoMA: Momentum Contrastive Learning with Multi-head Attention-based
  Knowledge Distillation for Histopathology Image Analysis
MoMA: Momentum Contrastive Learning with Multi-head Attention-based Knowledge Distillation for Histopathology Image Analysis
T. Vuong
J. T. Kwak
33
6
0
31 Aug 2023
Generative Adversarial Networks for Stain Normalisation in
  Histopathology
Generative Adversarial Networks for Stain Normalisation in Histopathology
Jack Breen
K. Zucker
Katie Allen
Nishant Ravikumar
Nicolas M. Orsi
GAN
MedIm
28
0
0
05 Aug 2023
Rethinking Mitosis Detection: Towards Diverse Data and Feature
  Representation
Rethinking Mitosis Detection: Towards Diverse Data and Feature Representation
Hao Wang
Jiatai Lin
Dan Li
Jing Wang
Bingchao Zhao
...
C. Liang
Guoqiang Han
Li Liang
Chu Han
Zaiyi Liu
25
0
0
12 Jul 2023
A Fully Automated and Explainable Algorithm for the Prediction of
  Malignant Transformation in Oral Epithelial Dysplasia
A Fully Automated and Explainable Algorithm for the Prediction of Malignant Transformation in Oral Epithelial Dysplasia
A. Shephard
R. M. S. Bashir
H. Mahmood
Mostafa Jahanifar
F. Minhas
...
Jill M Brooks
P. Nankivell
H. Mehanna
S. Khurram
Nasir M. Rajpoot
15
3
0
06 Jul 2023
The STOIC2021 COVID-19 AI challenge: applying reusable training
  methodologies to private data
The STOIC2021 COVID-19 AI challenge: applying reusable training methodologies to private data
L. Boulogne
Julian Lorenz
Daniel Kienzle
Robin Schon
K. Ludwig
...
C. Russ
R. Ionasec
Nikos Paragios
Bram van Ginneken
Marieke Dubois
18
4
0
18 Jun 2023
Adaptive Domain Generalization for Digital Pathology Images
Adaptive Domain Generalization for Digital Pathology Images
A. Walker
MedIm
OOD
25
1
0
09 May 2023
Synthetic DOmain-Targeted Augmentation (S-DOTA) Improves Model
  Generalization in Digital Pathology
Synthetic DOmain-Targeted Augmentation (S-DOTA) Improves Model Generalization in Digital Pathology
Sai Chowdary Gullapally
Yibo Zhang
Nitin Mittal
Deeksha Kartik
Sandhya Srinivasan
...
Chintan Shah
J. Abel
D. Fahy
A. Taylor-Weiner
Anand Sampat
9
8
0
03 May 2023
Deep Learning in Breast Cancer Imaging: A Decade of Progress and Future
  Directions
Deep Learning in Breast Cancer Imaging: A Decade of Progress and Future Directions
Luyang Luo
Xi Wang
Yi-Mou Lin
Xiaoqi Ma
Andong Tan
R. Chan
V. Vardhanabhuti
W. C. Chu
Kwang-Ting Cheng
Hao Chen
22
50
0
13 Apr 2023
Multi-task learning for tissue segmentation and tumor detection in
  colorectal cancer histology slides
Multi-task learning for tissue segmentation and tumor detection in colorectal cancer histology slides
Lydia A. Schoenpflug
Maxime W. Lafarge
A. Frei
V. Koelzer
11
0
0
06 Apr 2023
VOLTA: an Environment-Aware Contrastive Cell Representation Learning for
  Histopathology
VOLTA: an Environment-Aware Contrastive Cell Representation Learning for Histopathology
Ramin Nakhli
Allen W. Zhang
Katherine Rich
Amirali Darbandsari
Elahe Shenasa
...
K. Milne
J. McAlpine
B. Nelson
C. Gilks
A. Bashashati
14
5
0
08 Mar 2023
Standardized CycleGAN training for unsupervised stain adaptation in
  invasive carcinoma classification for breast histopathology
Standardized CycleGAN training for unsupervised stain adaptation in invasive carcinoma classification for breast histopathology
Nicolas Nerrienet
Rémy Peyret
Marie Sockeel
Stéphane Sockeel
MedIm
16
4
0
30 Jan 2023
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology
  Dataset
Multi-Scanner Canine Cutaneous Squamous Cell Carcinoma Histopathology Dataset
Frauke Wilm
Marco Fragoso
C. Bertram
N. Stathonikos
Mathias Öttl
Jingna Qiu
R. Klopfleisch
Andreas K. Maier
Katharina Breininger
Marc Aubreville
OOD
8
4
0
11 Jan 2023
Fine-Grained Hard Negative Mining: Generalizing Mitosis Detection with a
  Fifth of the MIDOG 2022 Dataset
Fine-Grained Hard Negative Mining: Generalizing Mitosis Detection with a Fifth of the MIDOG 2022 Dataset
Maxime W. Lafarge
V. Koelzer
12
1
0
03 Jan 2023
Deep learning-based Subtyping of Atypical and Normal Mitoses using a
  Hierarchical Anchor-Free Object Detector
Deep learning-based Subtyping of Atypical and Normal Mitoses using a Hierarchical Anchor-Free Object Detector
Marc Aubreville
J. Ganz
Jonas Ammeling
T. Donovan
Rutger Fick
Katharina Breininger
C. Bertram
11
2
0
12 Dec 2022
Deep Learning-enabled Virtual Histological Staining of Biological
  Samples
Deep Learning-enabled Virtual Histological Staining of Biological Samples
Bijie Bai
Xilin Yang
Yuzhu Li
Yijie Zhang
N. Pillar
Aydogan Ozcan
19
150
0
13 Nov 2022
Radial Prediction Domain Adaption Classifier for the MIDOG 2022
  Challenge
Radial Prediction Domain Adaption Classifier for the MIDOG 2022 Challenge
Jonas Annuscheit
Christian Krumnow
14
1
0
29 Aug 2022
Multi tasks RetinaNet for mitosis detection
Multi tasks RetinaNet for mitosis detection
Chen Yang
Wang Ziyue
Fang Zijie
Bian Hao
Zhang Yongbing
8
0
0
26 Aug 2022
Mitosis Detection, Fast and Slow: Robust and Efficient Detection of
  Mitotic Figures
Mitosis Detection, Fast and Slow: Robust and Efficient Detection of Mitotic Figures
Mostafa Jahanifar
A. Shephard
Neda Zamanitajeddin
S. Graham
S. Raza
F. Minhas
Nasir M. Rajpoot
OOD
21
14
0
26 Aug 2022
Artifact-Based Domain Generalization of Skin Lesion Models
Artifact-Based Domain Generalization of Skin Lesion Models
Alceu Bissoto
Catarina Barata
Eduardo Valle
Sandra Avila
MedIm
AI4CE
33
13
0
20 Aug 2022
TIAger: Tumor-Infiltrating Lymphocyte Scoring in Breast Cancer for the
  TiGER Challenge
TIAger: Tumor-Infiltrating Lymphocyte Scoring in Breast Cancer for the TiGER Challenge
A. Shephard
Mostafa Jahanifar
Ruoyu Wang
Muhammad Dawood
S. Graham
K. Sidlauskas
S. Khurram
Nasir M. Rajpoot
S. Raza
24
6
0
23 Jun 2022
Metrics reloaded: Recommendations for image analysis validation
Metrics reloaded: Recommendations for image analysis validation
Lena Maier-Hein
Annika Reinke
Patrick Godau
M. Tizabi
Florian Buettner
...
Aleksei Tiulpin
Sotirios A. Tsaftaris
Ben Van Calster
Gaël Varoquaux
Paul F. Jäger
22
214
0
03 Jun 2022
Image-to-Image Translation with Conditional Adversarial Networks
Image-to-Image Translation with Conditional Adversarial Networks
Phillip Isola
Jun-Yan Zhu
Tinghui Zhou
Alexei A. Efros
SSeg
212
19,444
0
21 Nov 2016
1