Conditional Antibody Design as 3D Equivariant Graph Translation

Conditional Antibody Design as 3D Equivariant Graph Translation

12 August 2022

Yang Liu

Papers citing "Conditional Antibody Design as 3D Equivariant Graph Translation"

12 / 12 papers shown

Title
Decoupled Sequence and Structure Generation for Realistic Antibody Design Nayoung Kim Minsu Kim Sungsoo Ahn Jinkyoo Park 47 0 0 20 Jan 2025
MAMMAL -- Molecular Aligned Multi-Modal Architecture and Language Yoel Shoshan Moshiko Raboh Michal Ozery-Flato Vadim Ratner Alex Golts ... Sharon Kurant Joseph A. Morrone Parthasarathy Suryanarayanan Michal Rosen-Zvi Efrat Hexter 26 1 0 28 Oct 2024
ProteinGPT: Multimodal LLM for Protein Property Prediction and Structure Understanding Yijia Xiao Edward Sun Yiqiao Jin Qifan Wang Wei Wang 47 9 0 21 Aug 2024
A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications Jiaqi Han Jiacheng Cen Liming Wu Zongzhao Li Xiangzhe Kong ... Zhewei Wei Deli Zhao Yu Rong Wenbing Huang Wenbing Huang AI4CE 34 20 0 01 Mar 2024
ProtChatGPT: Towards Understanding Proteins with Large Language Models Chao Wang Hehe Fan Ruijie Quan Yi Yang 26 12 0 15 Feb 2024
Multi-level Protein Representation Learning for Blind Mutational Effect Prediction Y. Tan Bingxin Zhou Yuanhong Jiang Yu Wang Liang Hong 21 2 0 08 Jun 2023
Generalist Equivariant Transformer Towards 3D Molecular Interaction Learning Xiangzhe Kong Wen-bing Huang Yang Liu 22 13 0 02 Jun 2023
Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer Cheng Tan Zhangyang Gao Lirong Wu Jun-Xiong Xia Jiangbin Zheng Xihong Yang Yue Liu Bozhen Hu Stan Z. Li 31 14 0 21 Apr 2023
End-to-End Full-Atom Antibody Design Xiangzhe Kong Wenbing Huang Yang Liu 11 48 0 01 Feb 2023
Protein Sequence and Structure Co-Design with Equivariant Translation Chence Shi Chuanrui Wang Jiarui Lu Bozitao Zhong Jian Tang DiffM 22 47 0 17 Oct 2022
AntBO: Towards Real-World Automated Antibody Design with Combinatorial Bayesian Optimisation M. A. Khan Alexander I. Cowen-Rivers Antoine Grosnit Derrick-Goh-Xin Deik Philippe A. Robert ... Rasul Tutunov Dany Bou-Ammar Jun Wang Amos Storkey Haitham Bou-Ammar 45 22 0 29 Jan 2022
Frame Averaging for Invariant and Equivariant Network Design Omri Puny Matan Atzmon Heli Ben-Hamu Ishan Misra Aditya Grover Edward James Smith Y. Lipman FedML 42 90 0 07 Oct 2021