Topologically faithful image segmentation via induced matching of persistence barcodes

28 November 2022

Papers citing "Topologically faithful image segmentation via induced matching of persistence barcodes"

25 / 25 papers shown

Title
SDF-TopoNet: A Two-Stage Framework for Tubular Structure Segmentation via SDF Pre-training and Topology-Aware Fine-Tuning Siyi Wu L. Zhao Haotian Ma Xinyuan Song 36 0 0 14 Mar 2025
Skelite: Compact Neural Networks for Efficient Iterative Skeletonization Luis D. Reyes Vargas M. Menten Johannes C. Paetzold Nassir Navab Mohammad Farid Azampour 43 0 0 10 Mar 2025
TopoMortar: A dataset to evaluate image segmentation methods focused on topology accuracy Juan Miguel Valverde Motoya Koga Nijihiko Otsuka Anders Bjorholm Dahl 35 0 0 05 Mar 2025
Enhancing Graph Representation Learning with Localized Topological Features Zuoyu Yan Qi Zhao Ze Ye Tengfei Ma Liangcai Gao Zhi Tang Yusu Wang Chao Chen 47 0 0 17 Jan 2025
Conformable Convolution for Topologically Aware Learning of Complex Anatomical Structures Yousef Yeganeh Rui Xiao Goktug Guvercin Nassir Navab Azade Farshad MedIm 40 0 0 31 Dec 2024
TopoTxR: A topology-guided deep convolutional network for breast parenchyma learning on DCE-MRIs Fan Wang Zhilin Zou N. Sakla Luke Partyka Nil Rawal ... Wei Zhao Haibin Ling Chuan Huang Prateek Prasanna C. L. P. Chen MedIm 23 3 0 05 Nov 2024
Topograph: An efficient Graph-Based Framework for Strictly Topology Preserving Image Segmentation Laurin Lux Alexander H. Berger Alexander Weers Nico Stucki Daniel Rueckert Ulrich Bauer Johannes C. Paetzold 34 2 0 05 Nov 2024
TopoDiffusionNet: A Topology-aware Diffusion Model Saumya Gupta Dimitris Samaras C. L. P. Chen DiffM 36 4 0 22 Oct 2024
Universal Topology Refinement for Medical Image Segmentation with Polynomial Feature Synthesis Liu Li Hanchun Wang Matthew Baugh Qiang Ma Weitong Zhang Cheng Ouyang Daniel Rueckert Bernhard Kainz MedIm 29 0 0 15 Sep 2024
PI-Att: Topology Attention for Segmentation Networks through Adaptive Persistence Image Representation Mehmet Bahadir Erden S. Unver I. A. Gurses R. Turkay C. Gunduz-Demir 36 0 0 15 Aug 2024
Scalar Function Topology Divergence: Comparing Topology of 3D Objects I. Trofimov Daria Voronkova Eduard Tulchinskii Evgeny Burnaev Serguei Barannikov 29 0 0 11 Jul 2024
Efficient Betti Matching Enables Topology-Aware 3D Segmentation via Persistent Homology Nico Stucki Vincent Bürgin Johannes C. Paetzold Ulrich Bauer 3DV 37 1 0 05 Jul 2024
Centerline Boundary Dice Loss for Vascular Segmentation Pengcheng Shi Jiesi Hu Yanwu Yang Zilve Gao Wei Liu Ting Ma 37 8 0 01 Jul 2024
Enhancing Boundary Segmentation for Topological Accuracy with Skeleton-based Methods Chuni Liu Boyuan Ma Xiaojuan Ban Yujie Xie Hao Wang Weihua Xue Jingchao Ma Ke Xu 37 4 0 29 Apr 2024
Topologically faithful multi-class segmentation in medical images Alexander H. Berger Nico Stucki Laurin Lux Vincent Buergin Suprosanna Shit Anna Banaszak Daniel Rueckert Ulrich Bauer Johannes C. Paetzold 37 3 0 16 Mar 2024
Benchmarking the CoW with the TopCoW Challenge: Topology-Aware Anatomical Segmentation of the Circle of Willis for CTA and MRA Kaiyuan Yang Fabio Musio Yihui Ma Norman Juchler Johannes C. Paetzold ... Klaus Maier-Hein et al. Sven Hirsch Susanne Wegener Bjoern H. Menze 19 23 0 29 Dec 2023
VSR-Net: Vessel-like Structure Rehabilitation Network with Graph Clustering Haili Ye Xiaoqing Zhang Yan Hu Huazhu Fu Jiang-Dong Liu 35 4 0 20 Dec 2023
Semi-supervised Segmentation of Histopathology Images with Noise-Aware Topological Consistency Meilong Xu Xiaoling Hu Saumya Gupta Shahira Abousamra Chao Chen 30 6 0 28 Nov 2023
Non-isotropic Persistent Homology: Leveraging the Metric Dependency of PH Vincent P. Grande Michael T. Schaub 17 0 0 25 Oct 2023
Wasserstein Auto-Encoders of Merge Trees (and Persistence Diagrams) Mathieu Pont Julien Tierny 18 3 0 05 Jul 2023
Topology-Aware Uncertainty for Image Segmentation Saumya Gupta Yikai Zhang Xiaoling Hu Prateek Prasanna Chao Chen 28 27 0 09 Jun 2023
A Learning-based Framework for Topology-Preserving Segmentation using Quasiconformal Mappings Han Zhang L. Lui 29 6 0 07 Oct 2022
Fast Topological Signal Identification and Persistent Cohomological Cycle Matching Inés García-Redondo Anthea Monod Anna Song 16 7 0 30 Sep 2022
Unified Focal loss: Generalising Dice and cross entropy-based losses to handle class imbalanced medical image segmentation Michael Yeung Evis Sala Carola-Bibiane Schönlieb L. Rundo 30 393 0 08 Feb 2021
Cycle Registration in Persistent Homology with Applications in Topological Bootstrap Yohai Reani O. Bobrowski 103 24 0 03 Jan 2021