DiffSDS: A language diffusion model for protein backbone inpainting
under geometric conditions and constraints

DiffSDS: A language diffusion model for protein backbone inpainting under geometric conditions and constraints

22 January 2023

Cheng Tan

Stan Z. Li

Papers citing "DiffSDS: A language diffusion model for protein backbone inpainting under geometric conditions and constraints"

11 / 11 papers shown

Title
Knowledge-Design: Pushing the Limit of Protein Design via Knowledge Refinement Zhangyang Gao Cheng Tan Stan Z. Li 19 15 0 20 May 2023
Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer Cheng Tan Zhangyang Gao Lirong Wu Jun-Xiong Xia Jiangbin Zheng Xihong Yang Yue Liu Bozhen Hu Stan Z. Li 20 14 0 21 Apr 2023
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 59 104 0 22 Sep 2022
Diffusion-LM Improves Controllable Text Generation Xiang Lisa Li John Thickstun Ishaan Gulrajani Percy Liang Tatsunori B. Hashimoto AI4CE 166 768 0 27 May 2022
Protein Structure and Sequence Generation with Equivariant Denoising Diffusion Probabilistic Models N. Anand Tudor Achim DiffM 175 170 0 26 May 2022
AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB Zhangyang Gao Cheng Tan Stan Z. Li 132 52 0 01 Feb 2022
RePaint: Inpainting using Denoising Diffusion Probabilistic Models Andreas Lugmayr Martin Danelljan Andrés Romero F. I. F. Richard Yu Radu Timofte Luc Van Gool DiffM 203 1,330 0 24 Jan 2022
Label-Efficient Semantic Segmentation with Diffusion Models Dmitry Baranchuk Ivan Rubachev A. Voynov Valentin Khrulkov Artem Babenko DiffM VLM 187 508 0 06 Dec 2021
Inverse design of 3d molecular structures with conditional generative neural networks Niklas W. A. Gebauer M. Gastegger Stefaan S. P. Hessmann Klaus-Robert Muller Kristof T. Schütt AI4CE 179 162 0 10 Sep 2021
Deep Generative Modeling for Protein Design Alexey Strokach Philip M. Kim AI4CE 169 90 0 31 Aug 2021
3DMolNet: A Generative Network for Molecular Structures V. Nesterov Mario Wieser Volker Roth AI4CE 154 33 0 08 Oct 2020