A Systematic Study of Joint Representation Learning on Protein Sequences
and Structures

A Systematic Study of Joint Representation Learning on Protein Sequences and Structures

11 March 2023

Vijil Chenthamarakshan

Jian Tang

Papers citing "A Systematic Study of Joint Representation Learning on Protein Sequences and Structures"

6 / 6 papers shown

Title
AtomSurf : Surface Representation for Learning on Protein Structures Vincent Mallet Souhaib Attaiki M. Ovsjanikov 32 3 0 28 Sep 2023
DiffDock: Diffusion Steps, Twists, and Turns for Molecular Docking Gabriele Corso Hannes Stärk Bowen Jing Regina Barzilay Tommi Jaakkola DiffM 130 399 0 04 Oct 2022
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 59 104 0 22 Sep 2022
Contrastive Representation Learning for 3D Protein Structures Pedro Hermosilla Timo Ropinski 3DV 41 51 0 31 May 2022
Tranception: protein fitness prediction with autoregressive transformers and inference-time retrieval Pascal Notin M. Dias J. Frazer Javier Marchena-Hurtado Aidan N. Gomez D. Marks Y. Gal 53 172 0 27 May 2022
OntoProtein: Protein Pretraining With Gene Ontology Embedding Ningyu Zhang Zhen Bi Xiaozhuan Liang Shuyang Cheng Haosen Hong Shumin Deng J. Lian Qiang Zhang Huajun Chen 91 86 0 23 Jan 2022