Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot
Antibody Designer

Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer

21 April 2023

Cheng Tan

Lirong Wu

Yue Liu

Stan Z. Li

Papers citing "Cross-Gate MLP with Protein Complex Invariant Embedding is A One-Shot Antibody Designer"

11 / 11 papers shown

Title
MeToken: Uniform Micro-environment Token Boosts Post-Translational Modification Prediction Cheng Tan Zhenxiao Cao Zhangyang Gao Lirong Wu Siyuan Li Yufei Huang Jun-Xiong Xia Bozhen Hu Stan Z. Li 33 0 0 04 Nov 2024
FoldToken2: Learning compact, invariant and generative protein structure language Zhangyang Gao Cheng Tan Stan Z. Li 16 3 0 11 Jun 2024
Learning to Predict Mutation Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical Prompt Learning Lirong Wu Yijun Tian Haitao Lin Yufei Huang Siyuan Li Nitesh V. Chawla Stan Z. Li 20 4 0 16 May 2024
A Survey of Geometric Graph Neural Networks: Data Structures, Models and Applications Jiaqi Han Jiacheng Cen Liming Wu Zongzhao Li Xiangzhe Kong ... Zhewei Wei Deli Zhao Yu Rong Wenbing Huang Wenbing Huang AI4CE 29 20 0 01 Mar 2024
FoldToken: Learning Protein Language via Vector Quantization and Beyond Zhangyang Gao Cheng Tan Jue Wang Yufei Huang Lirong Wu Stan Z. Li 15 9 0 04 Feb 2024
Efficiently Predicting Protein Stability Changes Upon Single-point Mutation with Large Language Models Yijie Zhang Zhangyang Gao Cheng Tan Stan Z.Li 17 2 0 07 Dec 2023
RDesign: Hierarchical Data-efficient Representation Learning for Tertiary Structure-based RNA Design Cheng Tan Yijie Zhang Zhangyang Gao Bozhen Hu Siyuan Li Zicheng Liu Stan Z. Li 17 5 0 25 Jan 2023
Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective Cheng Tan Zhangyang Gao Hanqun Cao Xingran Chen Ge Wang Lirong Wu Jun-Xiong Xia Jiangbin Zheng Stan Z. Li 11 0 0 02 Dec 2022
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 59 104 0 22 Sep 2022
AlphaDesign: A graph protein design method and benchmark on AlphaFoldDB Zhangyang Gao Cheng Tan Stan Z. Li 129 52 0 01 Feb 2022
Co-learning: Learning from Noisy Labels with Self-supervision Cheng Tan Jun-Xiong Xia Lirong Wu Stan Z. Li NoLa 59 114 0 05 Aug 2021