PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for
Efficient and Generalizable Compound-Protein Interaction Prediction

PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction

13 February 2024

Lirong Wu

Cheng Tan

Zicheng Liu

Stan Z. Li

Papers citing "PSC-CPI: Multi-Scale Protein Sequence-Structure Contrasting for Efficient and Generalizable Compound-Protein Interaction Prediction"

10 / 10 papers shown

Title
Learning to Predict Mutation Effects of Protein-Protein Interactions by Microenvironment-aware Hierarchical Prompt Learning Lirong Wu Yijun Tian Haitao Lin Yufei Huang Siyuan Li Nitesh V. Chawla Stan Z. Li 42 4 0 16 May 2024
VQDNA: Unleashing the Power of Vector Quantization for Multi-Species Genomic Sequence Modeling Siyuan Li Zedong Wang Zicheng Liu Di Wu Cheng Tan Jiangbin Zheng Yufei Huang Stan Z. Li 40 7 0 13 May 2024
A Teacher-Free Graph Knowledge Distillation Framework with Dual Self-Distillation Lirong Wu Haitao Lin Zhangyang Gao Guojiang Zhao Stan Z. Li 40 8 0 06 Mar 2024
Enhancing Protein Predictive Models via Proteins Data Augmentation: A Benchmark and New Directions Rui Sun Lirong Wu Haitao Lin Yufei Huang Stan Z. Li 30 1 0 01 Mar 2024
MAPE-PPI: Towards Effective and Efficient Protein-Protein Interaction Prediction via Microenvironment-Aware Protein Embedding Lirong Wu Yijun Tian Yufei Huang Siyuan Li Haitao Lin Nitesh V. Chawla Stan Z. Li 31 22 0 22 Feb 2024
A Graph is Worth $K$ Words: Euclideanizing Graph using Pure Transformer Zhangyang Gao Daize Dong Cheng Tan Jun-Xiong Xia Bozhen Hu Stan Z. Li 46 6 0 04 Feb 2024
Protein 3D Graph Structure Learning for Robust Structure-based Protein Property Prediction Yufei Huang Siyuan Li Jin Su Lirong Wu Odin Zhang ... Zihan Liu Zhangyang Gao Yuyang Liu Jiangbin Zheng Stan. ZQ. Li 3DV 38 13 0 14 Oct 2023
Deciphering RNA Secondary Structure Prediction: A Probabilistic K-Rook Matching Perspective Cheng Tan Zhangyang Gao Hanqun Cao Xingran Chen Ge Wang Lirong Wu Jun-Xiong Xia Jiangbin Zheng Stan Z. Li 24 1 0 02 Dec 2022
PiFold: Toward effective and efficient protein inverse folding Zhangyang Gao Cheng Tan Pablo Chacón Stan Z. Li AI4CE 67 104 0 22 Sep 2022
Contrastive Representation Learning for 3D Protein Structures Pedro Hermosilla Timo Ropinski 3DV 46 51 0 31 May 2022