Aligning Target-Aware Molecule Diffusion Models with Exact Energy
Optimization

Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization

1 July 2024

Alexander Powers

Papers citing "Aligning Target-Aware Molecule Diffusion Models with Exact Energy Optimization"

13 / 13 papers shown

Title
Sharpe Ratio-Guided Active Learning for Preference Optimization in RLHF Syrine Belakaria Joshua Kazdan Charles Marx Chris Cundy W. Neiswanger Sanmi Koyejo Barbara Engelhardt Stefano Ermon 29 0 0 28 Mar 2025
TransDiffSBDD: Causality-Aware Multi-Modal Structure-Based Drug Design Xiuyuan Hu Guoqing Liu Can Chen Yang Zhao Hao Zhang Xue Liu 50 2 0 26 Mar 2025
Alignment of Diffusion Models: Fundamentals, Challenges, and Future Buhua Liu Shitong Shao Bao Li Lichen Bai Zhiqiang Xu Haoyi Xiong James Kwok Sumi Helal Zeke Xie 37 11 0 11 Sep 2024
Fragment-Masked Diffusion for Molecular Optimization Kun Li Xiantao Cai Jia Wu Shirui Pan Huiting Xu Bo Du Wenbin Hu 33 0 0 17 Aug 2024
Decomposed Direct Preference Optimization for Structure-Based Drug Design Xiwei Cheng Xiangxin Zhou Yuwei Yang Yu Bao Quanquan Gu 36 3 0 19 Jul 2024
CBGBench: Fill in the Blank of Protein-Molecule Complex Binding Graph Haitao Lin Guojiang Zhao Odin Zhang Yufei Huang Lirong Wu Zicheng Liu Siyuan Li Cheng Tan Zhifeng Gao Stan Z. Li 27 3 0 16 Jun 2024
Antigen-Specific Antibody Design via Direct Energy-based Preference Optimization Xiangxin Zhou Dongyu Xue Ruizhe Chen Zaixiang Zheng Liang Wang Quanquan Gu DiffM 33 19 0 25 Mar 2024
Noise Contrastive Alignment of Language Models with Explicit Rewards Huayu Chen Guande He Lifan Yuan Ganqu Cui Hang Su Jun Zhu 52 37 0 08 Feb 2024
Towards Efficient Exact Optimization of Language Model Alignment Haozhe Ji Cheng Lu Yilin Niu Pei Ke Hongning Wang Jun Zhu Jie Tang Minlie Huang 50 11 0 01 Feb 2024
A 3D Generative Model for Structure-Based Drug Design Shitong Luo Jiaqi Guan Jianzhu Ma Jian-wei Peng DiffM 65 178 0 20 Mar 2022
Training language models to follow instructions with human feedback Long Ouyang Jeff Wu Xu Jiang Diogo Almeida Carroll L. Wainwright ... Amanda Askell Peter Welinder Paul Christiano Jan Leike Ryan J. Lowe OSLM ALM 303 11,881 0 04 Mar 2022
Fine-Tuning Language Models from Human Preferences Daniel M. Ziegler Nisan Stiennon Jeff Wu Tom B. Brown Alec Radford Dario Amodei Paul Christiano G. Irving ALM 275 1,583 0 18 Sep 2019
Junction Tree Variational Autoencoder for Molecular Graph Generation Wengong Jin Regina Barzilay Tommi Jaakkola 219 1,329 0 12 Feb 2018