3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation

21 June 2016

Thomas Brox

Papers citing "3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation"

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Title
Enhancing Weakly Supervised 3D Medical Image Segmentation through Probabilistic-aware Learning Zhaoxin Fan Runmin Jiang Junhao Wu Xin Huang Tianyang Wang Heng Huang Min Xu 41 2 0 05 Mar 2024
MedContext: Learning Contextual Cues for Efficient Volumetric Medical Segmentation Hanan Gani Muzammal Naseer Fahad Khan Salman Khan 28 0 0 27 Feb 2024
3D Vascular Segmentation Supervised by 2D Annotation of Maximum Intensity Projection Zhanqiang Guo Zimeng Tan Jianjiang Feng Jie Zhou 3DPC 49 11 0 19 Feb 2024
DABS-LS: Deep Atlas-Based Segmentation Using Regional Level Set Self-Supervision Hannah G. Mason Jack H. Noble 22 1 0 16 Feb 2024
TAI-GAN: A Temporally and Anatomically Informed Generative Adversarial Network for early-to-late frame conversion in dynamic cardiac PET inter-frame motion correction Xueqi Guo Luyao Shi Xiongchao Chen Qiong Liu Bo Zhou ... Albert J Sinusas Lawrence H. Staib Bruce Spottiswoode Chi Liu Nicha Dvornek MedIm 32 1 0 14 Feb 2024
Transferring Ultrahigh-Field Representations for Intensity-Guided Brain Segmentation of Low-Field Magnetic Resonance Imaging Kwanseok Oh Jieun Lee Da-Woon Heo Dinggang Shen Heung-Il Suk 22 0 0 13 Feb 2024
Re-DiffiNet: Modeling discrepancies in tumor segmentation using diffusion models Tianyi Ren Abhishek Sharma Juampablo Heras Rivera Harshitha Rebala Ethan Honey Agamdeep Chopra Jacob Ruzevick Mehmet Kurt DiffM MedIm 32 0 0 12 Feb 2024
Semi-Mamba-UNet: Pixel-Level Contrastive and Pixel-Level Cross-Supervised Visual Mamba-based UNet for Semi-Supervised Medical Image Segmentation Chao Ma Ziyang Wang Mamba 45 22 0 11 Feb 2024
Large-Language-Model Empowered Dose Volume Histogram Prediction for Intensity Modulated Radiotherapy Zehao Dong Yixin Chen Hiram Gay Yao Hao Geoff Hugo Pamela Samson Tianyu Zhao 42 0 0 11 Feb 2024
An Optimization Framework for Processing and Transfer Learning for the Brain Tumor Segmentation Tianyi Ren Ethan Honey Harshitha Rebala Abhishek Sharma Agamdeep Chopra Mehmet Kurt 16 5 0 10 Feb 2024
Deep Learning-Based Auto-Segmentation of Planning Target Volume for Total Marrow and Lymph Node Irradiation R. C. Brioso D. Dei N. Lambri Daniele Loiacono P. Mancosu M. Scorsetti 19 0 0 09 Feb 2024
3D-2D Neural Nets for Phase Retrieval in Noisy Interferometric Imaging Andrew H. Proppe Guillaume Thekkadath Duncan England P. Bustard Frédéric Bouchard Jeff S. Lundeen Benjamin J. Sussman 8 1 0 08 Feb 2024
Self-calibrated convolution towards glioma segmentation Felipe C. R. Salvagnini Gerson O. Barbosa Alexandre X. Falcão C. A. N. Santos 28 0 0 07 Feb 2024
Sparse Anatomical Prompt Semi-Supervised Learning with Masked Image Modeling for CBCT Tooth Segmentation Pengyu Dai Yafei Ou Yang Liu Yue Zhao 16 0 0 07 Feb 2024
3D Volumetric Super-Resolution in Radiology Using 3D RRDB-GAN Juhyung Ha Nian Wang Surendra Maharjan Xuhong Zhang MedIm 24 4 0 06 Feb 2024
Beyond Strong labels: Weakly-supervised Learning Based on Gaussian Pseudo Labels for The Segmentation of Ellipse-like Vascular Structures in Non-contrast CTs Qixiang Ma Antoine Lucas Huazhong Shu A. Kaladji P. Haigron 26 0 0 05 Feb 2024
Architecture Analysis and Benchmarking of 3D U-shaped Deep Learning Models for Thoracic Anatomical Segmentation Arash Harirpoush Amir Rasoulian Marta Kersten-Oertel Yiming Xiao 3DV 11 0 0 05 Feb 2024
An end-to-end deep learning pipeline to derive blood input with partial volume corrections for automated parametric brain PET mapping Rugved Chavan Gabriel Hyman Zoraiz Qureshi Nivetha Jayakumar William Terrell ... Nathan Fountain T. Muttikkal Mark Quigg Miaomiao Zhang Bijoy Kundu MedIm 21 1 0 05 Feb 2024
AI-Enhanced Virtual Reality in Medicine: A Comprehensive Survey YiXuan Wu Kaiyuan Hu Danny Chen Jian Wu 42 6 0 05 Feb 2024
Instance Segmentation XXL-CT Challenge of a Historic Airplane Roland Gruber Johann Christopher Engster Markus Michen Nele Blum M. Stille S. Gerth Thomas Wittenberg 25 2 0 05 Feb 2024
VM-UNet: Vision Mamba UNet for Medical Image Segmentation Jiacheng Ruan Suncheng Xiang Mamba 81 259 0 04 Feb 2024
DiffVein: A Unified Diffusion Network for Finger Vein Segmentation and Authentication Yanjun Liu Wenming Yang Qingmin Liao DiffM 33 2 0 03 Feb 2024
DoseGNN: Improving the Performance of Deep Learning Models in Adaptive Dose-Volume Histogram Prediction through Graph Neural Networks Zehao Dong Yixin Chen Tianyu Zhao OOD 37 2 0 02 Feb 2024
H-SynEx: Using synthetic images and ultra-high resolution ex vivo MRI for hypothalamus subregion segmentation Lívia Rodrigues Martina Bocchetta Oula Puonti Douglas N. Greve A. C. Londe Marcondes França Simone Appenzeller J. Iglesias Letícia Rittner 26 1 0 30 Jan 2024
Biological Valuation Map of Flanders: A Sentinel-2 Imagery Analysis Mingshi Li Dusan Grujicic S. D. Saeger Stien Heremans Ben Somers Matthew B. Blaschko 17 1 0 26 Jan 2024
TriSAM: Tri-Plane SAM for zero-shot cortical blood vessel segmentation in VEM images Jia Wan Wanhua Li Jason Ken Adhinarta Atmadeep Banerjee Evelina Sjostedt Jingpeng Wu J. Lichtman Hanspeter Pfister D. Wei 34 6 0 25 Jan 2024
Lumiere: A Space-Time Diffusion Model for Video Generation Omer Bar-Tal Hila Chefer Omer Tov Charles Herrmann Roni Paiss ... T. Michaeli Oliver Wang Deqing Sun Tali Dekel Inbar Mosseri VGen 114 219 0 23 Jan 2024
Neural deformation fields for template-based reconstruction of cortical surfaces from MRI Fabian Bongratz Anne-Marie Rickmann Christian Wachinger 37 12 0 23 Jan 2024
Deep Spatiotemporal Clutter Filtering of Transthoracic Echocardiographic Images: Leveraging Contextual Attention and Residual Learning Mahdi Tabassian Somayeh Akbari Sandro Queirós Jan D’hooge 30 0 0 23 Jan 2024
MOSformer: Momentum encoder-based inter-slice fusion transformer for medical image segmentation De-Xing Huang Xiao-Hu Zhou Xiaoliang Xie Shiqi Liu Zhen-Qiu Feng Mei-Jiang Gui Hao Li Tian-Yu Xiang Xiu-Ling Liu Zeng-Guang Hou MedIm 38 1 0 22 Jan 2024
Equivariant Multiscale Learned Invertible Reconstruction for Cone Beam CT N. Moriakov J. Sonke Jonas Teuwen 16 0 0 20 Jan 2024
ICGNet: A Unified Approach for Instance-Centric Grasping René Zurbrugg Yifan Liu Francis Engelmann Suryansh Kumar Marco Hutter Vaishakh Patil Fisher Yu 3DV 34 10 0 18 Jan 2024
PMFSNet: Polarized Multi-scale Feature Self-attention Network For Lightweight Medical Image Segmentation Jiahui Zhong Wenhong Tian Yuanlun Xie Zhijia Liu Jie Ou Taoran Tian Lei Zhang 23 6 0 15 Jan 2024
An automated framework for brain vessel centerline extraction from CTA images Sijie Liu Ruisheng Su Jianghang Su J. Xin Jiayi Wu ... P. van Doormaal A. van der Lugt W. Niessen Nanning Zheng T. van Walsum 35 1 0 13 Jan 2024
Leveraging Frequency Domain Learning in 3D Vessel Segmentation Xinyuan Wang Changzai Pan Hongming Dai Gangming Zhao Jinpeng Li Xiao Zhang Yizhou Yu 30 0 0 11 Jan 2024
Kernel-U-Net: Symmetric and Hierarchical Architecture for Multivariate Time Series Forecasting Jiang You René Natowicz Arben Cela Jacob Ouanounou Patrick Siarry AI4TS 34 3 0 03 Jan 2024
DiffMorph: Text-less Image Morphing with Diffusion Models Shounak Chatterjee DiffM 15 0 0 01 Jan 2024
BRAU-Net++: U-Shaped Hybrid CNN-Transformer Network for Medical Image Segmentation Libin Lan Pengzhou Cai Lu Jiang Xiaojuan Liu Yongmei Li Yudong Zhang ViT MedIm 29 6 0 01 Jan 2024
Automatic hip osteoarthritis grading with uncertainty estimation from computed tomography using digitally-reconstructed radiographs Masachika Masuda Mazen Soufi Yoshito Otake Keisuke Uemura Sotaro Kono ... Yi Gu Masaki Takao Seiji Okada Nobuhiko Sugano Yoshinobu Sato OOD 37 5 0 30 Dec 2023
One Model to Rule them All: Towards Universal Segmentation for Medical Images with Text Prompts Ziheng Zhao Yao Zhang Chaoyi Wu Xiaoman Zhang Ya Zhang Yanfeng Wang Weidi Xie VLM MedIm 35 37 0 28 Dec 2023
$μ$ -Net: ConvNext-Based U-Nets for Cosmic Muon Tomography Li Xin Jed Lim Ziming Qiu 24 0 0 25 Dec 2023
Scout-Net: Prospective Personalized Estimation of CT Organ Doses from Scout Views A. Imran Sen Wang Debashish Pal Sandeep Dutta Bhavik Patel Evan Zucker Adam S. Wang 22 3 0 23 Dec 2023
VSR-Net: Vessel-like Structure Rehabilitation Network with Graph Clustering Haili Ye Xiaoqing Zhang Yan Hu Huazhu Fu Jiang-Dong Liu 40 4 0 20 Dec 2023
InstructVideo: Instructing Video Diffusion Models with Human Feedback Hangjie Yuan Shiwei Zhang Xiang Wang Yujie Wei Tao Feng Yining Pan Yingya Zhang Ziwei Liu Samuel Albanie Dong Ni VGen 42 42 0 19 Dec 2023
Self-supervised Learning for Enhancing Geometrical Modeling in 3D-Aware Generative Adversarial Network Jiarong Guo Xiaogang Xu Hengshuang Zhao 44 1 0 19 Dec 2023
Exploring UMAP in hybrid models of entropy-based and representativeness sampling for active learning in biomedical segmentation Hai Siong Tan Kuancheng Wang R. Mcbeth 46 3 0 16 Dec 2023
PnPNet: Pull-and-Push Networks for Volumetric Segmentation with Boundary Confusion Xin You Ming Ding Minghui Zhang Hanxiao Zhang Yi Yu Jie Yang Yun Gu 51 1 0 13 Dec 2023
TABSurfer: a Hybrid Deep Learning Architecture for Subcortical Segmentation Aaron Cao Vishwanatha M. Rao Kejia Liu Xinru Liu Andrew F. Laine Jia Guo MedIm 34 1 0 13 Dec 2023
EventAid: Benchmarking Event-aided Image/Video Enhancement Algorithms with Real-captured Hybrid Dataset Peiqi Duan Boyu Li Yixin Yang Hanyue Lou Minggui Teng Yi Ma Boxin Shi 47 4 0 13 Dec 2023
Implicit Shape Modeling for Anatomical Structure Refinement of Volumetric Medical Images Minghui Zhang Shanshan Shi Renao Yan Liang Zhu Tian Guan MedIm 23 1 0 11 Dec 2023