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Low Data Drug Discovery with One-shot Learning

Low Data Drug Discovery with One-shot Learning

10 November 2016
Han Altae-Tran
Bharath Ramsundar
Aneesh S. Pappu
Vijay S. Pande
ArXivPDFHTML

Papers citing "Low Data Drug Discovery with One-shot Learning"

50 / 59 papers shown
Title
Adaptive Backdoor Attacks with Reasonable Constraints on Graph Neural Networks
Xuewen Dong
Jiachen Li
Shujun Li
Zhichao You
Qiang Qu
Yaroslav Kholodov
Yulong Shen
AAML
38
0
0
12 Mar 2025
FlashVideo: Flowing Fidelity to Detail for Efficient High-Resolution Video Generation
FlashVideo: Flowing Fidelity to Detail for Efficient High-Resolution Video Generation
Shilong Zhang
Wenbo Li
Shoufa Chen
Chongjian Ge
Peize Sun
Yunke Zhang
Yi-Xin Jiang
Zehuan Yuan
Binyue Peng
Ping Luo
DiffM
VGen
101
3
0
07 Feb 2025
Multi-view biomedical foundation models for molecule-target and property prediction
Multi-view biomedical foundation models for molecule-target and property prediction
Parthasarathy Suryanarayanan
Yunguang Qiu
Shreyans Sethi
Diwakar Mahajan
Hongyang Li
...
Bum Chul Kwon
Pablo Meyer
Feixiong Cheng
Jianying Hu
Joseph A. Morrone
AI4CE
33
0
0
25 Oct 2024
FragNet: A Graph Neural Network for Molecular Property Prediction with
  Four Layers of Interpretability
FragNet: A Graph Neural Network for Molecular Property Prediction with Four Layers of Interpretability
G. Panapitiya
Peiyuan Gao
C Mark Maupin
Emily Saldanha
AI4CE
39
1
0
16 Oct 2024
Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A Benchmark
Unifying Unsupervised Graph-Level Anomaly Detection and Out-of-Distribution Detection: A Benchmark
Yili Wang
Yixin Liu
Xu Shen
Chenyu Li
Kaize Ding
Rui Miao
Ying Wang
Shirui Pan
Xin Wang
42
8
0
21 Jun 2024
Knowledge-enhanced Relation Graph and Task Sampling for Few-shot
  Molecular Property Prediction
Knowledge-enhanced Relation Graph and Task Sampling for Few-shot Molecular Property Prediction
Zeyu Wang
Tianyi Jiang
Yao Lu
Xiaoze Bao
Shanqing Yu
Bin Wei
Qi Xuan
42
1
0
24 May 2024
Advancing Extrapolative Predictions of Material Properties through
  Learning to Learn
Advancing Extrapolative Predictions of Material Properties through Learning to Learn
Kohei Noda
Araki Wakiuchi
Yoshihiro Hayashi
Ryo Yoshida
AI4CE
40
0
0
25 Mar 2024
MetaDiff: Meta-Learning with Conditional Diffusion for Few-Shot Learning
MetaDiff: Meta-Learning with Conditional Diffusion for Few-Shot Learning
Baoquan Zhang
Chuyao Luo
Demin Yu
Huiwei Lin
Xutao Li
Yunming Ye
Bowen Zhang
DiffM
40
42
0
31 Jul 2023
Transfer Learning for Power Outage Detection Task with Limited Training
  Data
Transfer Learning for Power Outage Detection Task with Limited Training Data
Olukunle O. Owolabi
15
1
0
28 May 2023
A Comprehensive Survey on Deep Graph Representation Learning
A Comprehensive Survey on Deep Graph Representation Learning
Wei Ju
Zheng Fang
Yiyang Gu
Zequn Liu
Qingqing Long
...
Jingyang Yuan
Yusheng Zhao
Yifan Wang
Xiao Luo
Ming Zhang
GNN
AI4TS
51
141
0
11 Apr 2023
Molecular Property Prediction by Semantic-invariant Contrastive Learning
Molecular Property Prediction by Semantic-invariant Contrastive Learning
Ziqiao Zhang
Ailin Xie
Jihong Guan
Shuigeng Zhou
19
5
0
13 Mar 2023
Implicit Geometry and Interaction Embeddings Improve Few-Shot Molecular
  Property Prediction
Implicit Geometry and Interaction Embeddings Improve Few-Shot Molecular Property Prediction
Christopher Fifty
Joseph M. Paggi
Ehsan Amid
J. Leskovec
R. Dror
AI4CE
20
0
0
04 Feb 2023
A Penalty-Based Method for Communication-Efficient Decentralized Bilevel
  Programming
A Penalty-Based Method for Communication-Efficient Decentralized Bilevel Programming
Parvin Nazari
Ahmad Mousavi
Davoud Ataee Tarzanagh
George Michailidis
25
4
0
08 Nov 2022
Knowledge-Driven New Drug Recommendation
Knowledge-Driven New Drug Recommendation
Zhenbang Wu
Huaxiu Yao
Zhe Su
David M. Liebovitz
Lucas Glass
James Zou
Chelsea Finn
Jimeng Sun
18
4
0
11 Oct 2022
Learning Symbolic Model-Agnostic Loss Functions via Meta-Learning
Learning Symbolic Model-Agnostic Loss Functions via Meta-Learning
Christian Raymond
Qi Chen
Bing Xue
Mengjie Zhang
FedML
29
11
0
19 Sep 2022
A comprehensive survey on recent deep learning-based methods applied to
  surgical data
A comprehensive survey on recent deep learning-based methods applied to surgical data
Mansoor Ali
Rafael Martinez Garcia Peña
Gilberto Ochoa-Ruiz
Sharib Ali
24
6
0
03 Sep 2022
Graph neural networks for materials science and chemistry
Graph neural networks for materials science and chemistry
Patrick Reiser
Marlen Neubert
André Eberhard
Luca Torresi
Chen Zhou
...
Houssam Metni
Clint van Hoesel
Henrik Schopmans
T. Sommer
Pascal Friederich
GNN
AI4CE
50
373
0
05 Aug 2022
Attention-wise masked graph contrastive learning for predicting
  molecular property
Attention-wise masked graph contrastive learning for predicting molecular property
Hui Liu
Yibiao Huang
Xuejun Liu
L. Deng
17
33
0
02 May 2022
MolGenSurvey: A Systematic Survey in Machine Learning Models for
  Molecule Design
MolGenSurvey: A Systematic Survey in Machine Learning Models for Molecule Design
Yuanqi Du
Tianfan Fu
Jimeng Sun
Shengchao Liu
AI4CE
31
86
0
28 Mar 2022
Learning to Discover Medicines
Learning to Discover Medicines
T. Nguyen
Thin Nguyen
T. Tran
32
1
0
14 Feb 2022
Distribution Embedding Networks for Generalization from a Diverse Set of
  Classification Tasks
Distribution Embedding Networks for Generalization from a Diverse Set of Classification Tasks
Lang Liu
M. M. Fard
Sen Zhao
OOD
23
3
0
04 Feb 2022
One-Shot Learning on Attributed Sequences
One-Shot Learning on Attributed Sequences
Zhongfang Zhuang
Xiangnan Kong
Elke A. Rundensteiner
Aditya Arora
Jihane Zouaoui
BDL
27
2
0
23 Jan 2022
IAC: A Framework for Enabling Patient Agency in the Use of AI-Enabled
  Healthcare
IAC: A Framework for Enabling Patient Agency in the Use of AI-Enabled Healthcare
Chinasa T. Okolo
Michelle González Amador
13
0
0
29 Oct 2021
Prototype Completion for Few-Shot Learning
Prototype Completion for Few-Shot Learning
Baoquan Zhang
Xutao Li
Yunming Ye
Shanshan Feng
VLM
55
18
0
11 Aug 2021
Property-Aware Relation Networks for Few-Shot Molecular Property
  Prediction
Property-Aware Relation Networks for Few-Shot Molecular Property Prediction
Yaqing Wang
Abulikemu Abuduweili
Quanming Yao
Dejing Dou
34
67
0
16 Jul 2021
Large-Scale Chemical Language Representations Capture Molecular
  Structure and Properties
Large-Scale Chemical Language Representations Capture Molecular Structure and Properties
Jerret Ross
Brian M. Belgodere
Vijil Chenthamarakshan
Inkit Padhi
Youssef Mroueh
Payel Das
AI4CE
27
272
0
17 Jun 2021
What Can Knowledge Bring to Machine Learning? -- A Survey of Low-shot
  Learning for Structured Data
What Can Knowledge Bring to Machine Learning? -- A Survey of Low-shot Learning for Structured Data
Yang Hu
Adriane P. Chapman
Guihua Wen
Dame Wendy Hall
42
24
0
11 Jun 2021
Artificial Intelligence in Drug Discovery: Applications and Techniques
Artificial Intelligence in Drug Discovery: Applications and Techniques
Jianyuan Deng
Zhibo Yang
Iwao Ojima
Dimitris Samaras
Fusheng Wang
AI4TS
23
100
0
09 Jun 2021
Few-Shot Graph Learning for Molecular Property Prediction
Few-Shot Graph Learning for Molecular Property Prediction
Zhichun Guo
Chuxu Zhang
W. Yu
John E. Herr
Olaf Wiest
Meng Jiang
Nitesh V. Chawla
AI4CE
116
169
0
16 Feb 2021
Predicting Chemical Properties using Self-Attention Multi-task Learning
  based on SMILES Representation
Predicting Chemical Properties using Self-Attention Multi-task Learning based on SMILES Representation
Sangrak Lim
Yong Oh Lee
21
17
0
19 Oct 2020
Drug discovery with explainable artificial intelligence
Drug discovery with explainable artificial intelligence
José Jiménez-Luna
F. Grisoni
G. Schneider
30
625
0
01 Jul 2020
Self-supervised edge features for improved Graph Neural Network training
Self-supervised edge features for improved Graph Neural Network training
Arijit Sehanobish
N. Ravindra
David van Dijk
SSL
18
6
0
23 Jun 2020
Backdoor Attacks to Graph Neural Networks
Backdoor Attacks to Graph Neural Networks
Zaixi Zhang
Jinyuan Jia
Binghui Wang
Neil Zhenqiang Gong
GNN
18
210
0
19 Jun 2020
One-Shot Recognition of Manufacturing Defects in Steel Surfaces
One-Shot Recognition of Manufacturing Defects in Steel Surfaces
Aditya M. Deshpande
A. Minai
Manish Kumar
13
58
0
12 May 2020
InteractionNet: Modeling and Explaining of Noncovalent Protein-Ligand
  Interactions with Noncovalent Graph Neural Network and Layer-Wise Relevance
  Propagation
InteractionNet: Modeling and Explaining of Noncovalent Protein-Ligand Interactions with Noncovalent Graph Neural Network and Layer-Wise Relevance Propagation
Hyeoncheol Cho
E. Lee
I. Choi
GNN
FAtt
22
4
0
12 May 2020
Meta-Learning in Neural Networks: A Survey
Meta-Learning in Neural Networks: A Survey
Timothy M. Hospedales
Antreas Antoniou
P. Micaelli
Amos Storkey
OOD
43
1,928
0
11 Apr 2020
Autonomous discovery in the chemical sciences part II: Outlook
Autonomous discovery in the chemical sciences part II: Outlook
Connor W. Coley
Natalie S. Eyke
K. Jensen
29
171
0
30 Mar 2020
Weighted Meta-Learning
Weighted Meta-Learning
Diana Cai
Rishit Sheth
Lester W. Mackey
Nicolò Fusi
32
12
0
20 Mar 2020
Assessing Graph-based Deep Learning Models for Predicting Flash Point
Assessing Graph-based Deep Learning Models for Predicting Flash Point
Xiaoyu Sun
Nathaniel J. Krakauer
A. Politowicz
Wei-Ting Chen
Qiying Li
...
Xianjia Shao
Alfred Sunaryo
Mingren Shen
James Wang
D. Morgan
13
20
0
26 Feb 2020
Machine Learning and Big Scientific Data
Machine Learning and Big Scientific Data
Tony (Anthony) John Grenville Hey
K. Butler
Sam Jackson
Jeyarajan Thiyagalingam
AI4CE
28
74
0
12 Oct 2019
Molecular activity prediction using graph convolutional deep neural
  network considering distance on a molecular graph
Molecular activity prediction using graph convolutional deep neural network considering distance on a molecular graph
Masahito Ohue
Ryota
Keisuke Yanagisawa
Y. Akiyama
GNN
10
4
0
02 Jul 2019
SMILES-X: autonomous molecular compounds characterization for small
  datasets without descriptors
SMILES-X: autonomous molecular compounds characterization for small datasets without descriptors
G. Lambard
Ekaterina Gracheva
27
20
0
20 Jun 2019
Relational Pooling for Graph Representations
Relational Pooling for Graph Representations
R. Murphy
Balasubramaniam Srinivasan
Vinayak A. Rao
Bruno Ribeiro
GNN
33
256
0
06 Mar 2019
Bayesian semi-supervised learning for uncertainty-calibrated prediction
  of molecular properties and active learning
Bayesian semi-supervised learning for uncertainty-calibrated prediction of molecular properties and active learning
Yao Zhang
A. Lee
14
101
0
03 Feb 2019
KekuleScope: prediction of cancer cell line sensitivity and compound
  potency using convolutional neural networks trained on compound images
KekuleScope: prediction of cancer cell line sensitivity and compound potency using convolutional neural networks trained on compound images
I. Cortés-Ciriano
A. Bender
MedIm
27
51
0
22 Nov 2018
MT-CGCNN: Integrating Crystal Graph Convolutional Neural Network with
  Multitask Learning for Material Property Prediction
MT-CGCNN: Integrating Crystal Graph Convolutional Neural Network with Multitask Learning for Material Property Prediction
Soumya Sanyal
J. Balachandran
N. Yadati
Abhishek Kumar
Padmini Rajagopalan
Suchismita Sanyal
Partha P. Talukdar
21
48
0
14 Nov 2018
Dynamic Spectrum Matching with One-shot Learning
Dynamic Spectrum Matching with One-shot Learning
Jinchao Liu
S. Gibson
James Mills
Margarita Osadchy
21
37
0
23 Jun 2018
Bioinformatics and Medicine in the Era of Deep Learning
Bioinformatics and Medicine in the Era of Deep Learning
D. Bacciu
P. Lisboa
José D. Martín
R. Stoean
A. Vellido
AI4CE
BDL
33
17
0
27 Feb 2018
Edge Attention-based Multi-Relational Graph Convolutional Networks
Chao Shang
Qinqing Liu
Ko-Shin Chen
Jiangwen Sun
Jin Lu
Jinfeng Yi
J. Bi
GNN
32
93
0
14 Feb 2018
Molecular Structure Extraction From Documents Using Deep Learning
Molecular Structure Extraction From Documents Using Deep Learning
Joshua Staker
Kyle Marshall
Robert Abel
Carolyn McQuaw
24
73
0
14 Feb 2018
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