Deep learning tools for the measurement of animal behavior in neuroscience

30 September 2019

Papers citing "Deep learning tools for the measurement of animal behavior in neuroscience"

47 / 47 papers shown

Title
Towards Application-Specific Evaluation of Vision Models: Case Studies in Ecology and Biology A. H. H. Chan Otto Brookes Urs Waldmann Hemal Naik I. Couzin ... Lukas Boesch M. Arandjelovic H. Kühl T. Burghardt Fumihiro Kano 113 0 0 05 May 2025
MBE-ARI: A Multimodal Dataset Mapping Bi-directional Engagement in Animal-Robot Interaction Ian Noronha Advait Prasad Jawaji Juan Camilo Soto Jiajun An Yan Gu Upinder Kaur 27 0 0 11 Apr 2025
Whole-Herd Elephant Pose Estimation from Drone Data for Collective Behavior Analysis Brody McNutt Libby Zhang Angus Carey-Douglas F. Vollrath Frank Pope Leandra L. Brickson 21 1 0 31 Oct 2024
BaboonLand Dataset: Tracking Primates in the Wild and Automating Behaviour Recognition from Drone Videos Isla Duporge Maksim Kholiavchenko Roi Harel Scott Wolf Daniel Rubenstein ... Stephen Lee Julie Barreau Jenna Kline Michelle Ramirez Charles V. Stewart 29 7 0 27 May 2024
Animal Behavior Analysis Methods Using Deep Learning: A Survey Edoardo Fazzari Donato Romano Fabrizio Falchi Cesare Stefanini 19 3 0 22 May 2024
Feature-Aware Noise Contrastive Learning for Unsupervised Red Panda Re-Identification Jincheng Zhang Qijun Zhao Tie Liu 16 0 0 01 May 2024
Empowering Biomedical Discovery with AI Agents Shanghua Gao Ada Fang Yepeng Huang Valentina Giunchiglia Ayush Noori Jonathan Richard Schwarz Yasha Ektefaie Jovana Kondic Marinka Zitnik LLMAG AI4CE 39 66 0 03 Apr 2024
ComS2T: A complementary spatiotemporal learning system for data-adaptive model evolution Zhen-Qiang Zhou Qihe Huang Binwu Wang Jianpeng Hou Kuo Yang Yuxuan Liang Yang Wang AI4TS 30 2 0 04 Mar 2024
HOISDF: Constraining 3D Hand-Object Pose Estimation with Global Signed Distance Fields Haozhe Qi Chen Zhao Mathieu Salzmann Alexander Mathis 3DH 32 9 0 26 Feb 2024
Computer Vision for Primate Behavior Analysis in the Wild Richard Vogg Timo Lüddecke Jonathan Henrich Sharmita Dey Matthias Nuske ... Alexander Gail Stefan Treue H. Scherberger F. Worgotter Alexander S. Ecker 28 3 0 29 Jan 2024
Automated Behavioral Analysis Using Instance Segmentation Chen Yang Jeremy Forest Matthew Einhorn Thomas A. Cleland 20 3 0 12 Dec 2023
Automated Detection of Cat Facial Landmarks G.A. Martvel I. Shimshoni Anna Zamansky CVBM 16 13 0 15 Oct 2023
Insightful analysis of historical sources at scales beyond human capabilities using unsupervised Machine Learning and XAI Oliver Eberle Jochen Büttner Hassan el-Hajj G. Montavon Klaus-Robert Muller Matteo Valleriani 19 1 0 13 Oct 2023
Of Mice and Pose: 2D Mouse Pose Estimation from Unlabelled Data and Synthetic Prior José Sosa Sharn Perry Jane Elizabeth Alty David C. Hogg 29 3 0 25 Jul 2023
AmadeusGPT: a natural language interface for interactive animal behavioral analysis Shaokai Ye Jessy Lauer Mu Zhou Alexander Mathis Mackenzie W. Mathis MLLM LLMAG 27 17 0 10 Jul 2023
Elephants and Algorithms: A Review of the Current and Future Role of AI in Elephant Monitoring Leandra L. Brickson F. Vollrath A. Titus 19 12 0 23 Jun 2023
Rethinking pose estimation in crowds: overcoming the detection information-bottleneck and ambiguity Mu Zhou Lucas Stoffl Mackenzie W. Mathis Alexander Mathis VOT 10 16 0 13 Jun 2023
MammalNet: A Large-scale Video Benchmark for Mammal Recognition and Behavior Understanding Jun Chen Ming Hu D. Coker M. Berumen Blair R. Costelloe Sara Beery Anna Rohrbach Mohamed Elhoseiny 16 21 0 01 Jun 2023
3D-POP -- An automated annotation approach to facilitate markerless 2D-3D tracking of freely moving birds with marker-based motion capture Hemal Naik A. H. H. Chan Junran Yang Mathilde Delacoux I. Couzin Fumihiro Kano Nagy Máté 22 17 0 23 Mar 2023
CNN-Based Action Recognition and Pose Estimation for Classifying Animal Behavior from Videos: A Survey Michael Perez Corey Toler-Franklin MedIm 26 14 0 15 Jan 2023
OpenApePose: a database of annotated ape photographs for pose estimation Nisarg P. Desai Praneet C Bala Rebecca Richardson J. Raper Jan Zimmermann Benjamin Hayden 3DH 13 10 0 30 Nov 2022
Integrating Statistical and Machine Learning Approaches to Identify Receptive Field Structure in Neural Populations Mehrad Sarmashghi Shantanu P. Jadhav U. Eden 26 1 0 25 Jul 2022
The Caltech Fish Counting Dataset: A Benchmark for Multiple-Object Tracking and Counting Justin Kay Peter Kulits Suzanne Stathatos Siqi Deng Erik Young Sara Beery Grant Van Horn Pietro Perona 19 26 0 19 Jul 2022
Animal Kingdom: A Large and Diverse Dataset for Animal Behavior Understanding Xun Long Ng Kian Eng Ong Qichen Zheng Yun Ni S. Yeo J. Liu VGen 14 81 0 18 Apr 2022
SuperAnimal pretrained pose estimation models for behavioral analysis Shaokai Ye Anastasiia Filippova Jessy Lauer Steffen Schneider Maxime Vidal Tian Qiu Alexander Mathis Mackenzie W. Mathis 21 26 0 14 Mar 2022
GUNNEL: Guided Mixup Augmentation and Multi-View Fusion for Aquatic Animal Segmentation Minh-Quan Le Trung-Nghia Le Tam V. Nguyen Isao Echizen M. Tran 21 0 0 12 Dec 2021
A Survey on Adversarial Attacks for Malware Analysis Kshitiz Aryal Maanak Gupta Mahmoud Abdelsalam AAML 24 49 0 16 Nov 2021
Incremental Learning for Animal Pose Estimation using RBF k-DPP Gaurav Kumar Nayak Het Shah Anirban Chakraborty CLL 25 3 0 26 Oct 2021
Seeing biodiversity: perspectives in machine learning for wildlife conservation D. Tuia B. Kellenberger Sara Beery Blair R. Costelloe Silvia Zuffi ... I. Couzin Grant Van Horn M. Crofoot Chuck Stewart T. Berger-Wolf 28 391 0 25 Oct 2021
Self-supervised Secondary Landmark Detection via 3D Representation Learning Praneet C Bala Jan Zimmermann H. Park Benjamin Hayden SSL 10 8 0 01 Oct 2021
A Novel Dataset for Keypoint Detection of quadruped Animals from Images Prianka Banik Lin Li Xishuang Dong 14 19 0 31 Aug 2021
A brain basis of dynamical intelligence for AI and computational neuroscience J. Monaco Kanaka Rajan Grace M. Hwang AI4CE 24 6 0 15 May 2021
Measuring and modeling the motor system with machine learning Sébastien B Hausmann Alessandro Marin Vargas Alexander Mathis Mackenzie W. Mathis 40 50 0 22 Mar 2021
Fast deep learning correspondence for neuron tracking and identification in C.elegans using synthetic training Xinwei Yu Matthew S. Creamer F. Randi A. Sharma Scott W. Linderman Andrew M Leifer 11 24 0 20 Jan 2021
Unsupervised Behaviour Analysis and Magnification (uBAM) using Deep Learning Biagio Brattoli Uta Büchler Michael Dorkenwald Philipp Reiser Linard Filli F. Helmchen A. Wahl Bjorn Ommer 17 3 0 16 Dec 2020
Structured Context Enhancement Network for Mouse Pose Estimation Feixiang Zhou Zheheng Jiang Zhihua Liu Fangyuan Chen Long Chen ... Zhile Yang Haikuan Wang M. Fei Ling Li Huiyu Zhou 21 16 0 01 Dec 2020
A review of 3D human pose estimation algorithms for markerless motion capture Yann Desmarais Denis Mottet P. Slangen P. Montesinos 3DH 15 136 0 13 Oct 2020
A Primer on Motion Capture with Deep Learning: Principles, Pitfalls and Perspectives Alexander Mathis Steffen Schneider Jessy Lauer Mackenzie W. Mathis 20 165 0 01 Sep 2020
A Survey of Deep Learning for Scientific Discovery M. Raghu Erica Schmidt OOD AI4CE 30 120 0 26 Mar 2020
Data Science in Economics Saeed Nosratabadi Amir H. Mosavi Puhong Duan Pedram Ghamisi 8 8 0 19 Mar 2020
Transferring Dense Pose to Proximal Animal Classes A. Sanakoyeu Vasil Khalidov Maureen S. McCarthy Andrea Vedaldi Natalia Neverova 3DH 6 60 0 28 Feb 2020
Investigating naturalistic hand movements by behavior mining in long-term video and neural recordings Satpreet H. Singh Steven M. Peterson Rajesh P. N. Rao Bingni W. Brunton 15 2 0 23 Jan 2020
Animals in Virtual Environments Hemal Naik R. Bastien Nassir Navab I. Couzin 12 31 0 30 Dec 2019
Pretraining boosts out-of-domain robustness for pose estimation Alexander Mathis Thomas Biasi Steffen Schneider Mert Yüksekgönül Byron Rogers Matthias Bethge Mackenzie W. Mathis OOD 19 122 0 24 Sep 2019
DensePose: Dense Human Pose Estimation In The Wild R. Güler Natalia Neverova Iasonas Kokkinos 3DH 177 1,386 0 01 Feb 2018
A Survey on Deep Learning in Medical Image Analysis G. Litjens Thijs Kooi B. Bejnordi A. Setio F. Ciompi Mohsen Ghafoorian Jeroen van der Laak Bram van Ginneken C. I. Sánchez OOD 278 10,608 0 19 Feb 2017
SegNet: A Deep Convolutional Encoder-Decoder Architecture for Image Segmentation Vijay Badrinarayanan Alex Kendall R. Cipolla SSeg 437 15,631 0 02 Nov 2015