nnU-Net for Brain Tumor Segmentation

2 November 2020

Klaus H. Maier-Hein

Papers citing "nnU-Net for Brain Tumor Segmentation"

50 / 77 papers shown

Title
HWA-UNETR: Hierarchical Window Aggregate UNETR for 3D Multimodal Gastric Lesion Segmentation Jiaming Liang Lihuan Dai Xiaoqi Sheng Xiangguang Chen Chun Yao Guihua Tao Qibin Leng Honming Cai Xi Zhong 22 0 0 15 May 2025
Regression is all you need for medical image translation Sebastian Rassmann David Kügler Christian Ewert Martin Reuter DiffM MedIm 159 0 0 04 May 2025
IterMask3D: Unsupervised Anomaly Detection and Segmentation with Test-Time Iterative Mask Refinement in 3D Brain MR Ziyun Liang Xiaoqing Guo Wentian Xu Yasin Ibrahim Natalie Voets Pieter M Pretorius J. A. Noble Konstantinos Kamnitsas 29 0 0 07 Apr 2025
Dynamic Importance in Diffusion U-Net for Enhanced Image Synthesis Xi Wang Ziqi He Yang Zhou 37 0 0 04 Apr 2025
Optimizing Brain Tumor Segmentation with MedNeXt: BraTS 2024 SSA and Pediatrics Sarim Hashmi Juan Lugo Abdelrahman Elsayed Dinesh Saggurthi Mohammed Elseiagy Alikhan Nurkamal Jaskaran Walia F. Maani Mohammad Yaqub 168 1 0 24 Nov 2024
Improved Multi-Task Brain Tumour Segmentation with Synthetic Data Augmentation André Ferreira Tiago Jesus B. Puladi Jens Kleesiek Victor Alves Jan Egger 34 1 0 07 Nov 2024
Brain Tumour Removing and Missing Modality Generation using 3D WDM André Ferreira Gijs Luijten B. Puladi Jens Kleesiek Victor Alves Jan Egger 26 0 0 07 Nov 2024
MBDRes-U-Net: Multi-Scale Lightweight Brain Tumor Segmentation Network Longfeng Shen Yanqi Hou Jiacong Chen Liangjin Diao Yaxi Duan 24 0 0 04 Nov 2024
Enhancing Brain Tumor Classification Using TrAdaBoost and Multi-Classifier Deep Learning Approaches Mahin Mohammadi Saman Jamshidi 27 1 0 31 Oct 2024
FANCL: Feature-Guided Attention Network with Curriculum Learning for Brain Metastases Segmentation Zijiang Liu Xiaoyu Liu Linhao Qu Yonghong Shi MedIm 21 0 0 29 Oct 2024
Transferring Knowledge from High-Quality to Low-Quality MRI for Adult Glioma Diagnosis Yanguang Zhao Long Bai Zhaoxi Zhang Yanan Wu Mobarakol Islam Hongliang Ren 24 0 0 24 Oct 2024
Segmentation of Pediatric Brain Tumors using a Radiologically informed, Deep Learning Cascade Timothy Mulvany Daniel Griffiths-King Jan Novak Heather Rose 18 1 0 17 Oct 2024
MIST: A Simple and Scalable End-To-End 3D Medical Imaging Segmentation Framework Jingyao Wu Evan Lim T. Dang Brayden Mi Alex Balsells V. Sethu Caroline Chung Beatrice Riviere David T. Fuentes VLM 41 2 0 31 Jul 2024
Symmetry Awareness Encoded Deep Learning Framework for Brain Imaging Analysis Yang Ma Dongang Wang Peilin Liu L. Masters M. Barnett Weidong Cai Chenyu Wang 19 0 0 12 Jul 2024
Interactive Image Selection and Training for Brain Tumor Segmentation Network Matheus A. Cerqueira Flávia Sprenger Bernardo C. A. Teixeira Alexandre X. Falcão 38 3 0 05 Jun 2024
IterMask2: Iterative Unsupervised Anomaly Segmentation via Spatial and Frequency Masking for Brain Lesions in MRI Ziyun Liang Xiaoqing Guo J. A. Noble Konstantinos Kamnitsas 18 3 0 04 Jun 2024
LATUP-Net: A Lightweight 3D Attention U-Net with Parallel Convolutions for Brain Tumor Segmentation Ebtihal J. Alwadee Xianfang Sun Yipeng Qin F. Langbein 27 8 0 09 Apr 2024
Deep Learning-Based Brain Image Segmentation for Automated Tumour Detection S. Sourabh M. Valliappan Narayana Darapaneni P. AnweshR 19 0 0 06 Apr 2024
VASARI-auto: equitable, efficient, and economical featurisation of glioma MRI James K. Ruffle Samia Mohinta K. P. Baruteau Rebekah Rajiah Faith M. Y. Lee Sebastian Brandner P. Nachev H. Hyare 26 0 0 03 Apr 2024
Building Brain Tumor Segmentation Networks with User-Assisted Filter Estimation and Selection Matheus A. Cerqueira Flávia Sprenger B. C. Teixeira A. X. Falcão 27 10 0 19 Mar 2024
Advanced Tumor Segmentation in Medical Imaging: An Ensemble Approach for BraTS 2023 Adult Glioma and Pediatric Tumor Tasks F. Maani Anees Ur Rehman Hashmi Mariam Aljuboory Numan Saeed I. Sobirov Mohammad Yaqub 53 5 0 14 Mar 2024
Modality-Aware and Shift Mixer for Multi-modal Brain Tumor Segmentation Zhongzhen Huang Linda Wei Shaoting Zhang Xiaofan Zhang 31 0 0 04 Mar 2024
How we won BraTS 2023 Adult Glioma challenge? Just faking it! Enhanced Synthetic Data Augmentation and Model Ensemble for brain tumour segmentation André Ferreira Naida Solak Jianning Li Philipp Dammann Jens Kleesiek Victor Alves Jan Egger 19 13 0 27 Feb 2024
U-Mamba: Enhancing Long-range Dependency for Biomedical Image Segmentation Jun Ma Feifei Li Bo Wang Mamba 80 330 0 09 Jan 2024
Brain Tumor Segmentation Based on Deep Learning, Attention Mechanisms, and Energy-Based Uncertainty Prediction Zachary Schwehr Sriman Achanta 26 2 0 31 Dec 2023
Towards SAMBA: Segment Anything Model for Brain Tumor Segmentation in Sub-Sharan African Populations Mohannad Barakat Noha Magdy Jjuuko George William Ethel Phiri Raymond Confidence Dong Zhang U. Anazodo 18 3 0 19 Dec 2023
Panoptica -- instance-wise evaluation of 3D semantic and instance segmentation maps Florian Kofler Hendrik Möller Josef A. Buchner Ezequiel de la Rosa Ivan Ezhov ... Stefan K. Ehrlich Annika Reinke Bjoern H. Menze Benedikt Wiestler Marie Piraud ISeg 20 7 0 05 Dec 2023
Glioblastoma Tumor Segmentation using an Ensemble of Vision Transformers Huafeng Liu Benjamin Dowdell Todd Engelder Zarah Pulmano Nicolas Osa Arko Barman MedIm 14 1 0 09 Nov 2023
Hybrid-Fusion Transformer for Multisequence MRI Jihoon Cho Jinah Park MedIm ViT 28 6 0 02 Nov 2023
Feature Aggregation in Joint Sound Classification and Localization Neural Networks Brendan Healy Patrick McNamee Z. Nili Ahmadabadi 31 0 0 29 Oct 2023
Abdominal multi-organ segmentation in CT using Swinunter Mingjin Chen Yongkang He Yongyi Lu ViT OOD MedIm 16 0 0 28 Sep 2023
Look Ma, no code: fine tuning nnU-Net for the AutoPET II challenge by only adjusting its JSON plans Fabian Isensee Klaus H. Maier-Hein 24 2 0 24 Sep 2023
Does pre-training on brain-related tasks results in better deep-learning-based brain age biomarkers? Bruno Machado Pacheco Victor Hugo Rocha de Oliveira Augusto Antunes Saulo D. S. Pedro Danilo Silva AI4CE 14 1 0 11 Jul 2023
SMRVIS: Point cloud extraction from 3-D ultrasound for non-destructive testing L. Tang 3DPC 27 0 0 07 Jun 2023
Diagnosis and Prognosis of Head and Neck Cancer Patients using Artificial Intelligence I. Sobirov 21 0 0 31 May 2023
Neuralizer: General Neuroimage Analysis without Re-Training Steffen Czolbe H. Dickinson OOD 38 12 0 04 May 2023
The Segment Anything foundation model achieves favorable brain tumor autosegmentation accuracy on MRI to support radiotherapy treatment planning F. Putz J. Grigo T. Weissmann P. Schubert D. Hoefler ... L. Distel S. Semrau Christoph Bert R. Fietkau Yixing Huang 8 18 0 16 Apr 2023
Scale-Equivariant Deep Learning for 3D Data Thomas Wimmer Vladimir Golkov H. Dang Moritz Zaiss Andreas K. Maier Daniel Cremers 3DPC MedIm 20 5 0 12 Apr 2023
FMG-Net and W-Net: Multigrid Inspired Deep Learning Architectures For Medical Imaging Segmentation A. Celaya B. Rivière David T. Fuentes 6 4 0 05 Apr 2023
Unsupervised Brain Tumor Segmentation with Image-based Prompts Xinru Zhang N. Ou Chenghao Liu Z. Zhuo Yao Liu Chuyang Ye VLM 17 2 0 04 Apr 2023
M3AE: Multimodal Representation Learning for Brain Tumor Segmentation with Missing Modalities Hong Liu Dong Wei Donghuan Lu J. Sun Liansheng Wang Yefeng Zheng 19 39 0 09 Mar 2023
Towards more precise automatic analysis: a comprehensive survey of deep learning-based multi-organ segmentation Xiaoyu Liu Linhao Qu Ziyue Xie Jiayue Zhao Yonghong Shi Zhijian Song 26 6 0 01 Mar 2023
A Generalized Surface Loss for Reducing the Hausdorff Distance in Medical Imaging Segmentation A. Celaya B. Rivière David T. Fuentes MedIm 23 7 0 08 Feb 2023
Advances in Medical Image Analysis with Vision Transformers: A Comprehensive Review Reza Azad A. Kazerouni Moein Heidari Ehsan Khodapanah Aghdam Amir Molaei Yiwei Jia Abin Jose Rijo Roy Dorit Merhof MedIm ViT 30 161 0 09 Jan 2023
Joint Embedding of 2D and 3D Networks for Medical Image Anomaly Detection In-Joo Kang Jinah Park 3DH 13 1 0 21 Dec 2022
Multimodal CNN Networks for Brain Tumor Segmentation in MRI: A BraTS 2022 Challenge Solution Ramy A. Zeineldin Mohamed E. Karar Oliver Burgert Franziska Mathis-Ullrich 14 30 0 19 Dec 2022
Towards fully automated deep-learning-based brain tumor segmentation: is brain extraction still necessary? Bruno Machado Pacheco G. Cassia Danilo Silva 3DV 11 10 0 14 Dec 2022
Á net for everyone': fully personalized and unsupervised neural networks trained with longitudinal data from a single patient Christian Strack Kelsey L. Pomykala H. Schlemmer Jan Egger Jens Kleesiek 18 3 0 25 Oct 2022
Deep Superpixel Generation and Clustering for Weakly Supervised Segmentation of Brain Tumors in MR Images Jayeon Yoo Khashayar Namdar Farzad Khalvati 16 2 0 20 Sep 2022
Deep learning automates bidimensional and volumetric tumor burden measurement from MRI in pre- and post-operative glioblastoma patients J. Nalepa Krzysztof Kotowski B. Machura Szymon Adamski O. Bożek ... Marek Strzelczak Lukasz Zarudzki A. Krason F. Arcadu J. Tessier 13 18 0 03 Sep 2022