UNETR: Transformers for 3D Medical Image Segmentation

18 March 2021

Andriy Myronenko

Papers citing "UNETR: Transformers for 3D Medical Image Segmentation"

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Title
SAM Fewshot Finetuning for Anatomical Segmentation in Medical Images Weiyi Xie Nathalie Willems Shubham Patil Yang Li Mayank Kumar 54 13 0 05 Jul 2024
HoloHisto: End-to-end Gigapixel WSI Segmentation with 4K Resolution Sequential Tokenization Yucheng Tang Yufan He Vishwesh Nath Pengfeig Guo Ruining Deng ... Ziyue Xu Holger Roth Daguang Xu Haichun Yang Yuankai Huo 30 4 0 03 Jul 2024
Solving the inverse problem of microscopy deconvolution with a residual Beylkin-Coifman-Rokhlin neural network Rui Li M. Kudryashev Artur Yakimovich 25 1 0 03 Jul 2024
LaMoD: Latent Motion Diffusion Model For Myocardial Strain Generation Jiarui Xing Nivetha Jayakumar Nian Wu Yu Wang Frederick Epstein Miaomiao Zhang MedIm 20 0 0 02 Jul 2024
xLSTM-UNet can be an Effective 2D & 3D Medical Image Segmentation Backbone with Vision-LSTM (ViL) better than its Mamba Counterpart Tianrun Chen Chaotao Ding Lanyun Zhu Tao Xu Deyi Ji Yan Wang Ying-Dong Zang Z. Li MedIm Mamba 52 13 0 01 Jul 2024
Cross-Slice Attention and Evidential Critical Loss for Uncertainty-Aware Prostate Cancer Detection A. Hung Haoxin Zheng Kai Zhao Kaifeng Pang D. Terzopoulos Kyunghyun Sung EDL MedIm 37 1 0 01 Jul 2024
HATs: Hierarchical Adaptive Taxonomy Segmentation for Panoramic Pathology Image Analysis Ruining Deng Quan Liu Can Cui Tianyuan Yao Juming Xiong ... Yu Wang Shilin Zhao Yucheng Tang Haichun Yang Yuankai Huo 21 3 0 30 Jun 2024
UADSN: Uncertainty-Aware Dual-Stream Network for Facial Nerve Segmentation Guanghao Zhu Lin Liu Jing Zhang Xiaohui Du Ruqian Hao Juanxiu Liu 19 0 0 29 Jun 2024
Structural Attention: Rethinking Transformer for Unpaired Medical Image Synthesis Vu Minh Hieu Phan Yutong Xie Bowen Zhang Yuankai Qi Zhibin Liao Antonios Perperidis S. L. Phung Johan W. Verjans Minh Nguyen Nhat To MedIm 37 4 0 27 Jun 2024
Stable Diffusion Segmentation for Biomedical Images with Single-step Reverse Process Tianyu Lin Zhiguang Chen Zhonghao Yan Weijiang Yu Fudan Zheng MedIm 22 7 0 26 Jun 2024
EFCNet: Every Feature Counts for Small Medical Object Segmentation Lingjie Kong Qiaoling Wei Chengming Xu Han Chen Yanwei Fu 26 0 0 26 Jun 2024
Medical Image Segmentation Using Directional Window Attention Daniya Najiha Abdul Kareem M. Fiaz Noa Novershtern Hisham Cholakkal ViT MedIm 60 1 0 25 Jun 2024
Multi-Aperture Fusion of Transformer-Convolutional Network (MFTC-Net) for 3D Medical Image Segmentation and Visualization Siyavash Shabani Muhammad Sohaib Sahar A. Mohammed Bahram Parvin ViT MedIm 48 3 0 24 Jun 2024
Fuzzy Attention-based Border Rendering Network for Lung Organ Segmentation Sheng Zhang Yang Nan Yingying Fang Shiyi Wang Xiaodan Xing Zhifan Gao Guang Yang MedIm 35 0 0 23 Jun 2024
Skip and Skip: Segmenting Medical Images with Prompts Jiawei Chen Dingkang Yang Yuxuan Lei Lihua Zhang MedIm 33 0 0 21 Jun 2024
Rethinking Abdominal Organ Segmentation (RAOS) in the clinical scenario: A robustness evaluation benchmark with challenging cases Xiangde Luo Zihan Li Shaoting Zhang Wenjun Liao Guotai Wang OOD 22 4 0 19 Jun 2024
MiSuRe is all you need to explain your image segmentation Syed Nouman Hasany Fabrice Mériaudeau Caroline Petitjean 28 2 0 18 Jun 2024
Discriminative Hamiltonian Variational Autoencoder for Accurate Tumor Segmentation in Data-Scarce Regimes Aghiles Kebaili J. Lapuyade-Lahorgue Pierre Vera S. Ruan MedIm 31 0 0 17 Jun 2024
Multimodal Learning With Intraoperative CBCT & Variably Aligned Preoperative CT Data To Improve Segmentation M. Tschuchnig Philipp Steininger M. Gadermayr 24 0 0 17 Jun 2024
Self Pre-training with Topology- and Spatiality-aware Masked Autoencoders for 3D Medical Image Segmentation Pengfei Gu Yejia Zhang Huimin Li Chaoli Wang D. Z. Chen MedIm 58 1 0 15 Jun 2024
On Evaluating Adversarial Robustness of Volumetric Medical Segmentation Models H. Malik Numan Saeed Asif Hanif Muzammal Naseer Mohammad Yaqub Salman Khan F. Khan 48 0 0 12 Jun 2024
Convolution and Attention-Free Mamba-based Cardiac Image Segmentation Abbas Khan Muhammad Asad Martin Benning C. Roney Gregory Slabaugh Mamba 27 2 0 09 Jun 2024
SuperFormer: Volumetric Transformer Architectures for MRI Super-Resolution Cristhian Forigua María Escobar Pablo Arbelaez MedIm ViT 33 8 0 05 Jun 2024
EngineBench: Flow Reconstruction in the Transparent Combustion Chamber III Optical Engine Samuel J. Baker Michael A. Hobley Isabel Scherl Xiaohang Fang Felix C. P. Leach M. Davy AI4CE 28 0 0 05 Jun 2024
U-KAN Makes Strong Backbone for Medical Image Segmentation and Generation Chenxin Li Xinyu Liu W. J. Li Cheng Wang Hengyu Liu Yifan Liu Zhen Chen Yixuan Yuan MedIm DiffM SSeg 46 115 0 05 Jun 2024
FreeTumor: Advance Tumor Segmentation via Large-Scale Tumor Synthesis Linshan Wu Jiaxin Zhuang Xuefeng Ni Hao Chen MedIm 36 12 0 03 Jun 2024
Patch-Based Encoder-Decoder Architecture for Automatic Transmitted Light to Fluorescence Imaging Transition: Contribution to the LightMyCells Challenge Marek Wodzinski Henning Muller 21 1 0 03 Jun 2024
Whole Heart 3D+T Representation Learning Through Sparse 2D Cardiac MR Images Yundi Zhang Chen Chen Suprosanna Shit Sophie Starck Daniel Rueckert Jiazhen Pan 43 2 0 01 Jun 2024
Quality Sentinel: Estimating Label Quality and Errors in Medical Segmentation Datasets Yixiong Chen Zongwei Zhou Alan L. Yuille 32 1 0 01 Jun 2024
Applications of interpretable deep learning in neuroimaging: a comprehensive review Lindsay Munroe Mariana da Silva Faezeh Heidari I. Grigorescu Simon Dahan E. C. Robinson Maria Deprez Po-Wah So AI4CE 39 5 0 30 May 2024
Confidence-aware multi-modality learning for eye disease screening K. Zou Tian Lin Zongbo Han Meng Wang Xuedong Yuan Haoyu Chen Changqing Zhang Xiaojing Shen Huazhu Fu 48 3 0 28 May 2024
TokenUnify: Scalable Autoregressive Visual Pre-training with Mixture Token Prediction Yinda Chen Haoyuan Shi Xiaoyu Liu Te Shi Ruobing Zhang Dong Liu Zhiwei Xiong Feng Wu 42 9 0 27 May 2024
SiNGR: Brain Tumor Segmentation via Signed Normalized Geodesic Transform Regression Trung Dang Huy Hoang Nguyen A. Tiulpin 32 3 0 27 May 2024
Enhancing Feature Diversity Boosts Channel-Adaptive Vision Transformers Chau Pham Bryan A. Plummer 37 3 0 26 May 2024
PointRWKV: Efficient RWKV-Like Model for Hierarchical Point Cloud Learning Qingdong He Jiangning Zhang Jinlong Peng Haoyang He Yabiao Wang Chengjie Wang 3DPC 35 12 0 24 May 2024
BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once Theodore Zhao Yu Gu Jianwei Yang Naoto Usuyama Ho Hin Lee ... B. Piening Carlo Bifulco Mu-Hsin Wei Hoifung Poon Sheng Wang MedIm 31 22 0 21 May 2024
Self-supervised learning improves robustness of deep learning lung tumor segmentation to CT imaging differences Jue Jiang Aneesh Rangnekar H. Veeraraghavan OOD 35 0 0 14 May 2024
MRISegmentator-Abdomen: A Fully Automated Multi-Organ and Structure Segmentation Tool for T1-weighted Abdominal MRI Zhuang Yan T. Mathai Pritam Mukherjee Brandon Khoury Boah Kim Benjamin Hou N. Rabbee Abhinav Suri Ronald M. Summers 36 9 0 09 May 2024
DynaSeg: A Deep Dynamic Fusion Method for Unsupervised Image Segmentation Incorporating Feature Similarity and Spatial Continuity Boujemaa Guermazi Naimul Khan 30 2 0 09 May 2024
I $^3$ Net: Inter-Intra-slice Interpolation Network for Medical Slice Synthesis Haofei Song Xintian Mao Jing Yu Qingli Li Yan Wang OOD 43 1 0 05 May 2024
Towards Cross-Scale Attention and Surface Supervision for Fractured Bone Segmentation in CT Yu Zhou Xiahao Zou Yi Wang 19 1 0 02 May 2024
Real Time Multi Organ Classification on Computed Tomography Images H. Yerebakan Y. Shinagawa Gerardo Hermosillo 59 1 0 29 Apr 2024
GLIMS: Attention-Guided Lightweight Multi-Scale Hybrid Network for Volumetric Semantic Segmentation Z. A. Yazici Ilkay Oksuz H. K. Ekenel MedIm 38 7 0 27 Apr 2024
MiM: Mask in Mask Self-Supervised Pre-Training for 3D Medical Image Analysis Jiaxin Zhuang Linshan Wu Qiong Wang V. Vardhanabhuti Lin Luo Hao Chen Hao Chen 49 4 0 24 Apr 2024
Ultrasound Nodule Segmentation Using Asymmetric Learning with Simple Clinical Annotation Xingyue Zhao Zhongyu Li Xiangde Luo Peiqi Li Peng Huang ... Yang Liu Jihua Zhu Meng Yang Shih-Wei Chang Jun Dong 26 3 0 23 Apr 2024
Machine Learning Techniques for MRI Data Processing at Expanding Scale Taro Langner 27 0 0 22 Apr 2024
PEMMA: Parameter-Efficient Multi-Modal Adaptation for Medical Image Segmentation Nada Saadi Numan Saeed Mohammad Yaqub Karthik Nandakumar MedIm 43 0 0 21 Apr 2024
SegFormer3D: an Efficient Transformer for 3D Medical Image Segmentation Shehan Perera Pouyan Navard Alper Yilmaz MedIm 29 18 0 15 Apr 2024
Adaptive Patching for High-resolution Image Segmentation with Transformers Enzhi Zhang Isaac Lyngaas Peng Chen Xiao Wang Jun Igarashi Yuankai Huo M. Wahib M. Munetomo MedIm 27 1 0 15 Apr 2024
Weight Copy and Low-Rank Adaptation for Few-Shot Distillation of Vision Transformers Diana-Nicoleta Grigore Mariana-Iuliana Georgescu J. A. Justo T. Johansen Andreea-Iuliana Ionescu Radu Tudor Ionescu 26 0 0 14 Apr 2024