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CryoAI: Amortized Inference of Poses for Ab Initio Reconstruction of 3D Molecular Volumes from Real Cryo-EM Images

15 March 2022

Papers citing "CryoAI: Amortized Inference of Poses for Ab Initio Reconstruction of 3D Molecular Volumes from Real Cryo-EM Images"

22 / 22 papers shown

Title
CryoFastAR: Fast Cryo-EM Ab Initio Reconstruction Made Easy Jiakai Zhang S. K. Zhou Haizhao Dai Xinhang Liu Peihao Wang Zhiwen Fan Yuan Pei Jingyi Yu 40 0 0 06 Jun 2025
Improving Ab-Initio Cryo-EM Reconstruction with Semi-Amortized Pose Inference Shayan Shekarforoush David B. Lindell Marcus A. Brubaker David J. Fleet 54 2 0 15 Jun 2024
Equivariant amortized inference of poses for cryo-EM Larissa de Ruijter Gabriele Cesa 97 1 0 01 Jun 2024
cryoSPHERE: Single-particle heterogeneous reconstruction from cryo EM Gabriel Ducrocq Lukas Grunewald S. Westenhoff Fredrik Lindsten 81 1 0 29 May 2024
DualContrast: Unsupervised Disentangling of Content and Transformations with Implicit Parameterization M. R. Uddin Min Xu 153 0 0 27 May 2024
$Scalable 3D Reconstruction From Single Particle X-Ray Diffraction Images Based on Online Machine Learning$ Scalable 3D Reconstruction From Single Particle X-Ray Diffraction Images Based on Online Machine Learning Jay Shenoy Axel Levy Frédéric Poitevin Gordon Wetzstein 24 2 0 22 Dec 2023
Augmenting x-ray single particle imaging reconstruction with self-supervised machine learning Zhantao Chen Cong Wang Mingye Gao Chun Hong Yoon Jana Thayer Joshua J. Turner 62 0 0 28 Nov 2023
Recovering a Molecule's 3D Dynamics from Liquid-phase Electron Microscopy Movies E. Ye Yuhang Wang Hong Zhang Y. Gao Huan Wang H. Sun 72 2 0 23 Aug 2023
Improved Cryo-EM Pose Estimation and 3D Classification through Latent-Space Disentanglement Wei Chen Yuhang Wang Lin Yao DRL 33 1 0 09 Aug 2023
Cryo-forum: A framework for orientation recovery with uncertainty measure with the application in cryo-EM image analysis Szu-Chi Chung 58 1 0 19 Jul 2023
CryoChains: Heterogeneous Reconstruction of Molecular Assembly of Semi-flexible Chains from Cryo-EM Images Bongjin Koo Julien N. P. Martel A. Peck Axel Levy Frédéric Poitevin Nina Miolane AI4CE 87 2 0 12 Jun 2023
Deep Neural-network Prior for Orbit Recovery from Method of Moments Y. Khoo Sounak Paul N. Sharon 40 3 0 28 Apr 2023
CryoFormer: Continuous Heterogeneous Cryo-EM Reconstruction using Transformer-based Neural Representations Xinhang Liu Yan Zeng Yifan Qin Hao Li Jiakai Zhang Lan Xu Jingyi Yu ViT 55 2 0 28 Mar 2023
MELON: NeRF with Unposed Images in SO(3) Axel Levy Mark J. Matthews Matan Sela Gordon Wetzstein Dmitry Lagun 61 1 0 14 Mar 2023
Using VAEs to Learn Latent Variables: Observations on Applications in cryo-EM Daniel G Edelberg Roy R. Lederman CML DRL 49 5 0 13 Mar 2023
Image to Sphere: Learning Equivariant Features for Efficient Pose Prediction David Klee Ondrej Biza Robert Platt Robin Walters 95 21 0 27 Feb 2023
Boosted ab initio Cryo-EM 3D Reconstruction with ACE-EM Lin Yao Ruihan Xu Zhifeng Gao Guolin Ke Yuhang Wang 44 2 0 13 Feb 2023
Amortized Inference for Heterogeneous Reconstruction in Cryo-EM Axel Levy Gordon Wetzstein Julien N. P. Martel Frédéric Poitevin Ellen D. Zhong 70 38 0 13 Oct 2022
Heterogeneous reconstruction of deformable atomic models in Cryo-EM Y. Nashed A. Peck Julien N. P. Martel Axel Levy Bongjin Koo Gordon Wetzstein Nina Miolane Daniel Ratner Frédéric Poitevin 45 9 0 29 Sep 2022
Residual Multiplicative Filter Networks for Multiscale Reconstruction Shayan Shekarforoush David B. Lindell David J. Fleet Marcus A. Brubaker 64 27 0 01 Jun 2022
Deep Generative Modeling for Volume Reconstruction in Cryo-Electron Microscopy Claire Donnat Axel Levy Frédéric Poitevin Ellen D. Zhong Nina Miolane 53 37 0 08 Jan 2022
SAL: Sign Agnostic Learning of Shapes from Raw Data Matan Atzmon Y. Lipman 3DPC FedML 170 514 0 23 Nov 2019