Title
Brain PathoGraph Learning Ciyuan Peng Nguyen Linh Dan Le Shan Jin Dexuan Ding Shuo Yu Feng Xia MedIm 85 0 0 26 Sep 2025
Brain-HGCN: A Hyperbolic Graph Convolutional Network for Brain Functional Network Analysis Junhao Jia Yunyou Liu Cheng Yang Yifei Sun F. Qin Changmiao Wang Yong Peng 72 0 0 18 Sep 2025
3DViT-GAT: A Unified Atlas-Based 3D Vision Transformer and Graph Learning Framework for Major Depressive Disorder Detection Using Structural MRI Data Nojod M. Alotaibi Areej M. Alhothali Manar S. Ali 40 0 0 15 Sep 2025
Structure Matters: Brain Graph Augmentation via Learnable Edge Masking for Data-efficient Psychiatric Diagnosis Mujie Liu Chenze Wang Liping Chen Nguyen Linh Dan Le Niharika Tewari Ting Dang Jiangang Ma Feng Xia 151 0 0 11 Sep 2025
RTGMFF: Enhanced fMRI-based Brain Disorder Diagnosis via ROI-driven Text Generation and Multimodal Feature Fusion Junhao Jia Yifei Sun Yunyou Liu Cheng Yang Changmiao Wang Feiwei Qin Yong Peng Wenwen Min 72 2 0 03 Sep 2025
Reasoning in Computer Vision: Taxonomy, Models, Tasks, and Methodologies Ayushman Sarkar Mohd Yamani Idna Idris Zhenyu Yu LRM 132 8 0 14 Aug 2025
A Brain-to-Population Graph Learning Framework for Diagnosing Brain Disorders Qianqian Liao Wuque Cai Hongze Sun Dongze Liu Duo Chen Dezhong Yao Daqing Guo 145 0 0 19 Jun 2025
Brain Imaging Foundation Models, Are We There Yet? A Systematic Review of Foundation Models for Brain Imaging and Biomedical Research Salah Ghamizi G. Kanli Yu Deng Magali Perquin O. Keunen MedIm AI4CE 277 1 0 16 Jun 2025
BrainMAP: Multimodal Graph Learning For Efficient Brain Disease Localization Nguyen Linh Dan Le Jing Ren Ciyuan Peng Chengyao Xie Bowen Li Feng Xia 99 2 0 12 Jun 2025
A Brain Graph Foundation Model: Pre-Training and Prompt-Tuning for Any Atlas and Disorder Xinxu Wei K. Zhao Yong Jiao Lifang He Yu Zhang AI4CE 279 1 0 31 May 2025
CLIMB: Data Foundations for Large Scale Multimodal Clinical Foundation Models Wei Dai Peilin Chen Malinda Lu Daniel Li Haowen Wei Hejie Cui Paul Pu Liang LM&MA 267 11 0 09 Mar 2025
A graph neural network-based model with Out-of-Distribution Robustness for enhancing Antiretroviral Therapy Outcome Prediction for HIV-1 Giulia Di Teodoro F. Siciliano V. Guarrasi A. Vandamme Valeria Ghisetti Anders Sönnerborg Maurizio Zazzi Fabrizio Silvestri L. Palagi 350 14 0 24 Feb 2025
Biologically Plausible Brain Graph TransformerInternational Conference on Learning Representations (ICLR), 2025 Ciyuan Peng Yuelong Huang Qichao Dong Shuo Yu Xiwei Xu Chengqi Zhang Yaochu Jin 273 5 0 13 Feb 2025
Rethinking Functional Brain Connectome Analysis: Do Graph Deep Learning Models Help? Keqi Han Yao Su Lifang He Chen Tang Sergey Plis Vince D. Calhoun Carl Yang AI4CE 220 1 0 28 Jan 2025
A Comprehensive Survey of Foundation Models in MedicineIEEE Reviews in Biomedical Engineering (RBME), 2024 Wasif Khan Seowung Leem Kyle B. See Joshua K. Wong Shaoting Zhang R. Fang AI4CE LM&MA VLM 630 63 0 17 Jan 2025
Multi-atlas Ensemble Graph Neural Network Model For Major Depressive Disorder Detection Using Functional MRI Data Nojod M. Alotaibi Areej M. Alhothali Manar S. Ali 199 2 0 31 Dec 2024
Multi-Stage Graph Learning for fMRI Analysis to Diagnose Neuro-Developmental Disorders Wenjing Gao Yuanyuan Yang Jianrui Wei Xuntao Yin Xinhan Di 163 1 0 07 Oct 2024
Imbalanced Graph-Level Anomaly Detection via Counterfactual Augmentation and Feature Learning Zitong Wang Xuexiong Luo Enfeng Song Qiuqing Bai Fu Lin 165 2 0 13 Jul 2024
Beyond the Snapshot: Brain Tokenized Graph Transformer for Longitudinal Brain Functional Connectome EmbeddingInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2023 Zijian Dong Yilei Wu Yu Xiao J. Chong Yueming Jin J. Zhou MedIm 148 10 0 03 Jul 2023
Leveraging Brain Modularity Prior for Interpretable Representation Learning of fMRIIEEE Transactions on Biomedical Engineering (IEEE Trans. Biomed. Eng.), 2023 Qianqian Wang Wei Wang Yuqi Fang P. Yap Hongtu Zhu Hong-jun Li Lishan Qiao Mingxia Liu 153 14 0 24 Jun 2023
NeuroGraph: Benchmarks for Graph Machine Learning in Brain ConnectomicsNeural Information Processing Systems (NeurIPS), 2023 Anwar Said Roza G. Bayrak Hanyu Wang Mudassir Shabbir Daniel Moyer Catie Chang X. Koutsoukos 267 42 0 09 Jun 2023
Learning Task-Aware Effective Brain Connectivity for fMRI Analysis with Graph Neural Networks Yue Yu Xuan Kan Hejie Cui Ran Xu Yu Zheng ... Kun Zhang Razieh Nabi Ying Guo Chaogang Zhang Carl Yang 143 18 0 01 Nov 2022
Brain Network TransformerNeural Information Processing Systems (NeurIPS), 2022 Xuan Kan Wei Dai Hejie Cui Zilong Zhang Ying Guo Carl Yang MedIm 144 163 0 13 Oct 2022
Interpretable Graph Neural Networks for Connectome-Based Brain Disorder AnalysisInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2022 Hejie Cui Wei Dai Yanqiao Zhu Xiaoxiao Li Lifang He Carl Yang 262 101 0 30 Jun 2022
Data-Efficient Brain Connectome Analysis via Multi-Task Meta-LearningKnowledge Discovery and Data Mining (KDD), 2022 Yi Yang Yanqiao Zhu Hejie Cui Xuan Kan Lifang He Ying Guo Carl Yang 137 34 0 09 Jun 2022
On Positional and Structural Node Features for Graph Neural Networks on Non-attributed Graphs Hejie Cui Zijie Lu Pan Li Carl Yang 220 98 0 03 Jul 2021