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Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge

Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge

17 July 2023
Gilchan Park
Byung-Jun Yoon
Xihaier Luo
Vanessa López-Marrero
Shinjae Yoo
Francis J. Alexander
ArXivPDFHTML

Papers citing "Comparative Performance Evaluation of Large Language Models for Extracting Molecular Interactions and Pathway Knowledge"

5 / 5 papers shown
Title
BioMaze: Benchmarking and Enhancing Large Language Models for Biological Pathway Reasoning
BioMaze: Benchmarking and Enhancing Large Language Models for Biological Pathway Reasoning
Haiteng Zhao
Chang Ma
FangZhi Xu
Lingpeng Kong
Zhi-Hong Deng
LRM
42
2
0
23 Feb 2025
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments
BioDiscoveryAgent: An AI Agent for Designing Genetic Perturbation Experiments
Yusuf Roohani
Jian Vora
Qian Huang
Zach Steinhart
Alex Marson
Percy Liang
J. Leskovec
Percy Liang
Jure Leskovec
LLMAG
LM&Ro
39
13
0
27 May 2024
BioMedLM: A 2.7B Parameter Language Model Trained On Biomedical Text
BioMedLM: A 2.7B Parameter Language Model Trained On Biomedical Text
Elliot Bolton
Abhinav Venigalla
Michihiro Yasunaga
David Leo Wright Hall
Betty Xiong
...
R. Daneshjou
Jonathan Frankle
Percy Liang
Michael Carbin
Christopher D. Manning
LM&MA
MedIm
26
45
0
27 Mar 2024
Density Estimation via Measure Transport: Outlook for Applications in
  the Biological Sciences
Density Estimation via Measure Transport: Outlook for Applications in the Biological Sciences
Vanessa López-Marrero
Patrick R. Johnstone
Gilchan Park
Xihaier Luo
OT
14
1
0
27 Sep 2023
Large Language Models are Zero-Shot Reasoners
Large Language Models are Zero-Shot Reasoners
Takeshi Kojima
S. Gu
Machel Reid
Yutaka Matsuo
Yusuke Iwasawa
ReLM
LRM
291
2,712
0
24 May 2022
1