ProtAgents: Protein discovery via large language model multi-agent collaborations combining physics and machine learning

Digital Discovery (DD), 2024

27 January 2024

Papers citing "ProtAgents: Protein discovery via large language model multi-agent collaborations combining physics and machine learning"

31 / 31 papers shown

Title
Autonomous Agents for Scientific Discovery: Orchestrating Scientists, Language, Code, and Physics Lianhao Zhou Hongyi Ling Cong Fu Yepeng Huang Michael Sun ... X. Qian Heng Ji Wei Wang Marinka Zitnik Shuiwang Ji LLMAG LM&Ro AI4CE 108 2 0 10 Oct 2025
JoyAgent-JDGenie: Technical Report on the GAIA J. Liu Shiyue Xu Shangkun Liu Yang Li Wen Liu ... Hanhao Li J. Zhang Yongli Yu Peng Cao H. Wang LLMAG LM&Ro 65 0 0 01 Oct 2025
From Trace to Line: LLM Agent for Real-World OSS Vulnerability Localization Haoran Xi Minghao Shao Brendan Dolan-Gavitt Muhammad Shafique Ramesh Karri LLMAG 115 0 0 30 Sep 2025
Towards Transparent and Incentive-Compatible Collaboration in Decentralized LLM Multi-Agent Systems: A Blockchain-Driven Approach Minfeng Qi Tianqing Zhu Lefeng Zhang Ningran Li Wanlei Zhou 125 2 0 20 Sep 2025
From Language to Action: A Review of Large Language Models as Autonomous Agents and Tool Users Sadia Sultana Chowa Riasad Alvi Subhey Sadi Rahman M. R M. R M. Islam Mukhtar Hussain Sami Azam LLMAG LM&Ro ELM 195 5 0 24 Aug 2025
Generative Artificial Intelligence Extracts Structure-Function Relationships from Plants for New Materials Rachel K. Luu Jingyu Deng Mohammed Shahrudin Ibrahim Nam-Joon Cho Ming Dao Subra Suresh Markus J. Buehler AI4CE 60 0 0 08 Aug 2025
An Auditable Agent Platform For Automated Molecular Optimisation Atabey Ünlü Phil Rohr Ahmet Celebi 137 0 0 05 Aug 2025
Autonomous Inorganic Materials Discovery via Multi-Agent Physics-Aware Scientific Reasoning Alireza Ghafarollahi Markus J. Buehler LRM 698 0 1 04 Aug 2025
SciToolAgent: A Knowledge Graph-Driven Scientific Agent for Multi-Tool IntegrationNature Computational Science (Nat. Comput. Sci.), 2025 Keyan Ding Yuhao Wang Junjie Huang Yuchen Yang Qiang Zhang H. Chen LLMAG LM&Ro 126 11 0 27 Jul 2025
Active Inference AI Systems for Scientific Discovery Karthik Duraisamy AI4CE LRM 214 1 0 26 Jun 2025
AgentDistill: Training-Free Agent Distillation with Generalizable MCP Boxes Jiahao Qiu Xinzhe Juan Yimin Wang L. Yang Xuan Qi ... Hongru Wang Shilong Liu Xun Jiang Liu Leqi Mengdi Wang 169 8 0 17 Jun 2025
The Curious Language Model: Strategic Test-Time Information Acquisition Michael Cooper Rohan Wadhawan John Michael Giorgi Chenhao Tan Davis Liang 150 1 0 10 Jun 2025
Toward Greater Autonomy in Materials Discovery Agents: Unifying Planning, Physics, and Scientists Lianhao Zhou Hongyi Ling Keqiang Yan Kaiji Zhao X. Qian Raymundo Arroyave Xiaofeng Qian Shuiwang Ji LLMAG AI4CE 250 2 0 05 Jun 2025
Can Large Language Models Design Biological Weapons? Evaluating Moremi Bio Gertrude Hattoh Jeremiah Ayensu Nyarko Prince Ofori Solomon Eshun Darlington Akogo 94 0 0 22 May 2025
WorldView-Bench: A Benchmark for Evaluating Global Cultural Perspectives in Large Language Models Abdullah Mushtaq Imran Taj Rafay Naeem Ibrahim Ghaznavi Junaid Qadir 161 2 0 14 May 2025
An LLM-enabled Multi-Agent Autonomous Mechatronics Design Framework Zeyu Wang Frank P.-W. Lo Qian Chen Yongqi Zhang Chen Lin Xu Chen Zhenhua Yu Alexander J. Thompson Eric M. Yeatman Benny Lo AI4CE 158 2 0 20 Apr 2025
PriM: Principle-Inspired Material Discovery through Multi-Agent Collaboration Zheyuan Lai Yingming Pu 266 2 0 09 Apr 2025
AgentRxiv: Towards Collaborative Autonomous Research Samuel Schmidgall Michael Moor 323 22 0 23 Mar 2025
MedAgent-Pro: Towards Evidence-based Multi-modal Medical Diagnosis via Reasoning Agentic Workflow Ziyue Wang Junde Wu Linghan Cai Chang Han Low Xihong Yang Qiaxuan Li Yueming Jin LRM 364 13 0 21 Mar 2025
Agentic AI for Scientific Discovery: A Survey of Progress, Challenges, and Future Directions Mourad Gridach Jay Nanavati Khaldoun Zine El Abidine Lenon Mendes Christina Mack 287 46 0 12 Mar 2025
Towards an automated workflow in materials science for combining multi-modal simulative and experimental information using data mining and large language modelsMaterials Today Communications (MTC), 2025 Balduin Katzer Steffen Klinder Katrin Schulz AI4CE 154 1 0 24 Feb 2025
RAG-Enhanced Collaborative LLM Agents for Drug Discovery Namkyeong Lee Edward De Brouwer Ehsan Hajiramezanali Tommaso Biancalani Chanyoung Park Gabriele Scalia 375 11 0 22 Feb 2025
MDCrow: Automating Molecular Dynamics Workflows with Large Language Models Quintina Campbell Sam Cox Jorge Medina Brittany Watterson A. White LLMAG AI4CE 171 11 0 13 Feb 2025
Toward Inclusive Educational AI: Auditing Frontier LLMs through a Multiplexity Lens Abdullah Mushtaq Muhammad Rafay Naeem Muhammad Imran Taj Ibrahim Ghaznavi Junaid Qadir 172 4 0 08 Jan 2025
Rapid and Automated Alloy Design with Graph Neural Network-Powered LLM-Driven Multi-Agent Systems Alireza Ghafarollahi Markus J. Buehler AI4CE 110 7 0 17 Oct 2024
Leveraging Chemistry Foundation Models to Facilitate Structure Focused Retrieval Augmented Generation in Multi-Agent Workflows for Catalyst and Materials Design Nathaniel H. Park Tiffany J. Callahan James L. Hedrick Tim Erdmann Sara Capponi AI4CE 184 2 0 21 Aug 2024
Cephalo: Multi-Modal Vision-Language Models for Bio-Inspired Materials Analysis and Design Markus J. Buehler MLLM 267 23 0 29 May 2024
Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey Qizhi Pei Lijun Wu Ran Bi Jinhua Zhu Yue Wang Guoqing Liu Tao Qin Lijun Wu Rui Yan AI4CE 273 22 0 03 Mar 2024
Evolutionary Computation in the Era of Large Language Model: Survey and Roadmap Xingyu Wu Sheng-hao Wu Jibin Wu Liang Feng Kay Chen Tan ELM 393 116 0 18 Jan 2024
AutoGen: Enabling Next-Gen LLM Applications via Multi-Agent Conversation Qingyun Wu Gagan Bansal Jieyu Zhang Yiran Wu Beibin Li ... Jiale Liu Ahmed Hassan Awadallah Ryen W. White Doug Burger Chi Wang LLMAG AI4CE 283 829 0 16 Aug 2023
Building Cooperative Embodied Agents Modularly with Large Language ModelsInternational Conference on Learning Representations (ICLR), 2023 Hongxin Zhang Weihua Du Jiaming Shan Qinhong Zhou Yilun Du J. Tenenbaum Tianmin Shu Chuang Gan LLMAG LM&Ro 438 256 0 05 Jul 2023