Variational Flow Matching for Graph Generation

Variational Flow Matching for Graph Generation

7 June 2024

Floor Eijkelboom

Grigory Bartosh

Jan Willem van de Meent

Papers citing "Variational Flow Matching for Graph Generation"

16 / 16 papers shown

Title
ProtFlow: Fast Protein Sequence Design via Flow Matching on Compressed Protein Language Model Embeddings Zitai Kong Yiheng Zhu Yinlong Xu Hanjing Zhou Mingzhe Yin Jialu Wu Hongxia Xu Chang-Yu Hsieh Tingjun Hou J. Wu 24 0 0 15 Apr 2025
Critical Iterative Denoising: A Discrete Generative Model Applied to Graphs Yoann Boget Alexandros Kalousis DiffM 56 0 0 27 Mar 2025
Learning-Order Autoregressive Models with Application to Molecular Graph Generation Zhe Wang Jiaxin Shi N. Heess A. Gretton Michalis K. Titsias 49 0 0 07 Mar 2025
FragFM: Efficient Fragment-Based Molecular Generation via Discrete Flow Matching Joongwon Lee Seonghwan Kim Wou Youn Kim 39 0 0 19 Feb 2025
Devil is in the Details: Density Guidance for Detail-Aware Generation with Flow Models Rafał Karczewski Markus Heinonen Vikas K. Garg DiffM 42 0 0 09 Feb 2025
Graph Generative Pre-trained Transformer Xiaohui Chen Yinkai Wang Jiaxing He Yuanqi Du S. Hassoun Xiaolin Xu Li Liu 34 1 0 03 Jan 2025
Exploring Discrete Flow Matching for 3D De Novo Molecule Generation Ian Dunn D. Koes 90 4 0 25 Nov 2024
Training Free Guided Flow Matching with Optimal Control Luran Wang Chaoran Cheng Yizhen Liao Yanru Qu Ge Liu 31 1 0 23 Oct 2024
Steering Masked Discrete Diffusion Models via Discrete Denoising Posterior Prediction Jarrid Rector-Brooks Mohsin Hasan Zhangzhi Peng Zachary Quinn Chenghao Liu ... Michael Bronstein Yoshua Bengio Pranam Chatterjee Alexander Tong Avishek Joey Bose DiffM 42 6 0 10 Oct 2024
Dirichlet Flow Matching with Applications to DNA Sequence Design Hannes Stärk Bowen Jing Chenyu Wang Gabriele Corso Bonnie Berger Regina Barzilay Tommi Jaakkola BDL 42 45 0 08 Feb 2024
Generative Flows on Discrete State-Spaces: Enabling Multimodal Flows with Applications to Protein Co-Design Andrew Campbell Jason Yim Regina Barzilay Tom Rainforth Tommi Jaakkola AI4CE 60 96 0 07 Feb 2024
Stochastic Interpolants: A Unifying Framework for Flows and Diffusions M. S. Albergo Nicholas M. Boffi Eric Vanden-Eijnden DiffM 244 260 0 15 Mar 2023
LayoutDM: Discrete Diffusion Model for Controllable Layout Generation Naoto Inoue Kotaro Kikuchi E. Simo-Serra Mayu Otani Kota Yamaguchi DiffM 52 99 0 14 Mar 2023
Soft Diffusion: Score Matching for General Corruptions Giannis Daras M. Delbracio Hossein Talebi A. Dimakis P. Milanfar DiffM 55 105 0 12 Sep 2022
Matching Normalizing Flows and Probability Paths on Manifolds Heli Ben-Hamu Samuel N. Cohen Joey Bose Brandon Amos Aditya Grover Maximilian Nickel Ricky T. Q. Chen Y. Lipman 50 39 0 11 Jul 2022
GraphDF: A Discrete Flow Model for Molecular Graph Generation Youzhi Luo Keqiang Yan Shuiwang Ji DRL 168 185 0 01 Feb 2021