3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation

21 June 2016

Thomas Brox

Papers citing "3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation"

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Title
FAS-UNet: A Novel FAS-driven Unet to Learn Variational Image Segmentation Hui Zhu Shi Shu Jianping Zhang SSeg 27 6 0 27 Oct 2022
Fully Automated Deep Learning-enabled Detection for Hepatic Steatosis on Computed Tomography: A Multicenter International Validation Study Zhongyi Zhang Guixia Li Ziqiang Wang Feng Xia Ningbo Zhao Huibin Nie Zezhong Ye Joshua Lin Yiyi Hui Xiangchun Liu 24 0 0 27 Oct 2022
Segmentation of Bruch's Membrane in retinal OCT with AMD using anatomical priors and uncertainty quantification Botond Fazekas Dmitrii Lachinov Guilherme Aresta Julia Mai U. Schmidt-Erfurth Hrvoje Bogunović 18 18 0 26 Oct 2022
Super-Resolution Based Patch-Free 3D Image Segmentation with High-Frequency Guidance Hongyi Wang Lanfen Lin Hongjie Hu Qingqing Chen Yinhao Li Yutaro Iwamoto X. Han Yen-Wei Chen Ruofeng Tong 3DV 33 0 0 26 Oct 2022
Brain Tumor Segmentation using Enhanced U-Net Model with Empirical Analysis Md Abdullah Al Nasim Abdullah Al Munem Maksuda Islam Md Aminul Haque Palash Md. Mahim Anjum Haque F. Shah 29 30 0 24 Oct 2022
SphNet: A Spherical Network for Semantic Pointcloud Segmentation Lukas Bernreiter Lionel Ott Roland Siegwart Cesar Cadena 3DPC 38 1 0 24 Oct 2022
Adversarial Transformer for Repairing Human Airway Segmentation Zeyu Tang Nan Yang Simon Walsh Guang Yang ViT MedIm 32 13 0 21 Oct 2022
Estimating the coverage in 3d reconstructions of the colon from colonoscopy videos E. Muhlethaler Erez Posner Moshe Bouhnik 32 0 0 19 Oct 2022
ATCON: Attention Consistency for Vision Models Ali Mirzazadeh Florian Dubost M. Pike Krish Maniar Max Zuo Christopher Lee-Messer D. Rubin 18 1 0 18 Oct 2022
RibSeg v2: A Large-scale Benchmark for Rib Labeling and Anatomical Centerline Extraction L. Jin Shixuan Gu D. Wei Jason Ken Adhinarta Kaiming Kuang Yongjie Jessica Zhang Hanspeter Pfister Bingbing Ni Jiancheng Yang Ming Li 3DPC 27 15 0 18 Oct 2022
Cutting-Splicing data augmentation: A novel technology for medical image segmentation Lianting Hu Huiying Liang Jiajie Tang Xin Li Li Huang Long Lu 21 1 0 17 Oct 2022
Cerebrovascular Segmentation via Vessel Oriented Filtering Network Zhanqiang Guo Yao Luan Jianjiang Feng Wangsheng Lu Yin Yin Guangming Yang Jie Zhou 11 0 0 17 Oct 2022
Adaptive Contrastive Learning with Dynamic Correlation for Multi-Phase Organ Segmentation Ho Hin Lee Yucheng Tang Han Liu Yubo Fan L. Cai Qi Yang Xin Yu Shunxing Bao Yuankai Huo Bennett A. Landman 35 1 0 16 Oct 2022
PointNeuron: 3D Neuron Reconstruction via Geometry and Topology Learning of Point Clouds Runkai Zhao Heng Wang Chaoyi Zhang Weidong (Tom) Cai 3DV 28 6 0 15 Oct 2022
Comparison of different automatic solutions for resection cavity segmentation in postoperative MRI volumes including longitudinal acquisitions Luca Canalini J. Klein N. Barros Diana Sima Dorothea Miller Horst K. Hahn 11 2 0 14 Oct 2022
Improved automated lesion segmentation in whole-body FDG/PET-CT via Test-Time Augmentation Sepideh Amiri Bulat Ibragimov OOD 16 2 0 14 Oct 2022
ConvTransSeg: A Multi-resolution Convolution-Transformer Network for Medical Image Segmentation Zhendi Gong Andrew P French Guoping Qiu Xin Chen ViT MedIm 40 6 0 13 Oct 2022
Geometric Active Learning for Segmentation of Large 3D Volumes Thomas Lang T. Sauer 27 1 0 13 Oct 2022
A Comparative Study on 1.5T-3T MRI Conversion through Deep Neural Network Models Bin Liao Yani Chen Zhewei Wang Charles D. Smith Jundong Liu 3DV MedIm 18 2 0 12 Oct 2022
3D Brain and Heart Volume Generative Models: A Survey Yanbin Liu Girish Dwivedi F. Boussaïd Bennamoun MedIm AI4CE 28 6 0 12 Oct 2022
Crack Modeling via Minimum-Weight Surfaces in 3d Voronoi Diagrams Christian Jung C. Redenbach 19 8 0 11 Oct 2022
FLamby: Datasets and Benchmarks for Cross-Silo Federated Learning in Realistic Healthcare Settings Jean Ogier du Terrail Samy Ayed Edwige Cyffers Felix Grimberg Chaoyang He ... Sai Praneeth Karimireddy Marco Lorenzi Giovanni Neglia Marc Tommasi M. Andreux FedML 47 144 0 10 Oct 2022
Improved Abdominal Multi-Organ Segmentation via 3D Boundary-Constrained Deep Neural Networks Samra Irshad D. Gomes S. T. Kim 16 13 0 09 Oct 2022
Dual-distribution discrepancy with self-supervised refinement for anomaly detection in medical images Yu Cai Hao Chen Xin Yang Yu Zhou Kwang-Ting Cheng 33 45 0 09 Oct 2022
Detailed Annotations of Chest X-Rays via CT Projection for Report Understanding C. Seibold Simon Reiß Saquib Sarfraz M. Fink Victoria L. Mayer Jan Sellner Moon S. Kim Klaus H. Maier-Hein Jens Kleesiek Rainer Stiefelhagen 39 19 0 07 Oct 2022
A Learning-based Framework for Topology-Preserving Segmentation using Quasiconformal Mappings Han Zhang L. Lui 42 6 0 07 Oct 2022
FocalUNETR: A Focal Transformer for Boundary-aware Segmentation of CT Images Chengyin Li Yao Qiang Vikram Goddla H. Bagher-Ebadian Prashant Khanduri I. Chetty D. Zhu ViT MedIm 50 9 0 06 Oct 2022
FedGraph: an Aggregation Method from Graph Perspective Zhifang Deng Xiaohong Huang Dandan Li Xueguang Yuan FedML 30 0 0 06 Oct 2022
A deep learning model for brain vessel segmentation in 3DRA with arteriovenous malformations C. García Yibin Fang Jianmin Liu A. Narata J. Orlando Ignacio Larrabide 19 8 0 05 Oct 2022
APAUNet: Axis Projection Attention UNet for Small Target in 3D Medical Segmentation Yuncheng Jiang Zixun Zhang Shixi Qin Yao Guo Zhuguo Li Shuguang Cui 43 12 0 04 Oct 2022
3D UX-Net: A Large Kernel Volumetric ConvNet Modernizing Hierarchical Transformer for Medical Image Segmentation Ho Hin Lee Shunxing Bao Yuankai Huo Bennett A. Landman OOD MedIm 59 133 0 29 Sep 2022
UNesT: Local Spatial Representation Learning with Hierarchical Transformer for Efficient Medical Segmentation Xin Yu Qi Yang Yinchi Zhou L. Cai Riqiang Gao ... R. Abramson Zizhao Zhang Yuankai Huo Bennett A. Landman Yucheng Tang ViT MedIm 44 0 0 28 Sep 2022
A Review of Modern Approaches for Coronary Angiography Imaging Analysis Maxim Y Popov Temirgali Aimyshev Eldar Ismailov Ablay Bulegenov S. Fazli 26 3 0 28 Sep 2022
Partial annotations for the segmentation of large structures with low annotation cost Bella Specktor-Fadida Daphna Link-Sourani Liat Ben Sira Elka Miller D. Ben Bashat Leo Joskowicz 30 2 0 25 Sep 2022
Dive into Self-Supervised Learning for Medical Image Analysis: Data, Models and Tasks Chuyan Zhang Yun Gu 40 0 0 25 Sep 2022
CUTS: A Deep Learning and Topological Framework for Multigranular Unsupervised Medical Image Segmentation Chen Liu Matthew Amodio Liangbo L. Shen Feng Gao A. Avesta Snegha A Jay C. Wang L. V. Priore Smita Krishnaswamy OOD MedIm 35 13 0 23 Sep 2022
Beyond Voxel Prediction Uncertainty: Identifying brain lesions you can trust Benjamin Lambert Florence Forbes Senan Doyle A. Tucholka M. Dojat UQCV MedIm 26 6 0 22 Sep 2022
Understanding the Tricks of Deep Learning in Medical Image Segmentation: Challenges and Future Directions Dong-Ming Zhang Yi-Mou Lin Hao Chen Zhuotao Tian Xin Yang Jinhui Tang Kwang-Ting Cheng VLM 39 11 0 21 Sep 2022
Frequency Dropout: Feature-Level Regularization via Randomized Filtering Mobarakol Islam Ben Glocker OOD 48 6 0 20 Sep 2022
Attentive Symmetric Autoencoder for Brain MRI Segmentation Junjia Huang Haofeng Li Guanbin Li Xiang Wan MedIm 40 17 0 19 Sep 2022
Differentiable Topology-Preserved Distance Transform for Pulmonary Airway Segmentation Minghui Zhang Guangyao Yang Yun Gu 20 5 0 17 Sep 2022
Hybrid Window Attention Based Transformer Architecture for Brain Tumor Segmentation Himashi Peiris Munawar Hayat Zhaolin Chen Gary Egan Mehrtash Harandi MedIm 29 4 0 16 Sep 2022
MRI-MECH: Mechanics-informed MRI to estimate esophageal health Sourav Halder Ethan M. I. Johnson Jun Yamasaki P. Kahrilas M. Markl J. Pandolfino N. Patankar 21 7 0 15 Sep 2022
Label Refinement Network from Synthetic Error Augmentation for Medical Image Segmentation Shuai Chen Antonio Garcia Uceda Jiahang Su Gijs van Tulder L. Wolff T. van Walsum Marleen de Bruijne MedIm 29 4 0 14 Sep 2022
Moving from 2D to 3D: volumetric medical image classification for rectal cancer staging Joohyun Lee J. Oh Inkyu Shin You-sung Kim D. Sohn Tae-Sung Kim In So Kweon MedIm 32 4 0 13 Sep 2022
SELTO: Sample-Efficient Learned Topology Optimization Sören Dittmer David Erzmann Henrik Harms Peter Maass 37 2 0 12 Sep 2022
Diffusion Models in Vision: A Survey Florinel-Alin Croitoru Vlad Hondru Radu Tudor Ionescu M. Shah DiffM VLM MedIm 206 1,162 0 10 Sep 2022
Automatic fetal fat quantification from MRI Netanell Avisdris A. Rabinowich Daniel W Fridkin A. Zilberman Sapir Lazar ... Daphna Link-Sourani L. Ben‐Sira L. Hiersch D. Ben Bashat Leo Joskowicz 44 3 0 08 Sep 2022
Inversion of Time-Lapse Surface Gravity Data for Detection of 3D CO $_2$ Plumes via Deep Learning A. Celaya B. Denel Yen Sun Mauricio Araya-Polo A. Price 3DPC 34 10 0 06 Sep 2022
Fuzzy Attention Neural Network to Tackle Discontinuity in Airway Segmentation Yang Nan Javier Del Ser Zeyu Tang Pen Tang Xiaodan Xing Yingying Fang Francisco Herrera Witold Pedrycz Simon Walsh Guang Yang 30 26 0 05 Sep 2022