3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation

21 June 2016

Thomas Brox

Papers citing "3D U-Net: Learning Dense Volumetric Segmentation from Sparse Annotation"

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Title
Segmentation-based Assessment of Tumor-Vessel Involvement for Surgical Resectability Prediction of Pancreatic Ductal Adenocarcinoma Christiaan G. A. Viviers Mark Ramaekers Amaan Valiuddin Terese A. E. Hellström Nick Tasios ... Lotte J. S. Ewals Joost Nederend Peter H. N. de With M. Luyer Fons van der Sommen 32 3 0 01 Oct 2023
SimLVSeg: Simplifying Left Ventricular Segmentation in 2D+Time Echocardiograms with Self- and Weakly-Supervised Learning F. Maani Asim Ukaye Nada Saadi Numan Saeed Mohammad Yaqub 221 1 0 30 Sep 2023
DeformUX-Net: Exploring a 3D Foundation Backbone for Medical Image Segmentation with Depthwise Deformable Convolution Ho Hin Lee Quan Liu Qi Yang Xin Yu Shunxing Bao Yuankai Huo Bennett A. Landman MedIm 30 2 0 30 Sep 2023
Efficient Anatomical Labeling of Pulmonary Tree Structures via Implicit Point-Graph Networks Kangxian Xie Jiancheng Yang D. Wei Ziqiao Weng Pascal Fua 35 2 0 29 Sep 2023
A Comprehensive View of Personalized Federated Learning on Heterogeneous Clinical Datasets Fatemeh Tavakoli D. B. Emerson Sana Ayromlou John Jewell Amrit Krishnan Yuchong Zhang A. Verma Fahad Razak FedML 38 1 0 28 Sep 2023
FedCompass: Efficient Cross-Silo Federated Learning on Heterogeneous Client Devices using a Computing Power Aware Scheduler Zilinghan Li Pranshu Chaturvedi Shilan He Han-qiu Chen Gagandeep Singh Volodymyr V. Kindratenko Eliu A. Huerta Kibaek Kim Ravi K. Madduri FedML 42 9 0 26 Sep 2023
DeepMesh: Mesh-based Cardiac Motion Tracking using Deep Learning Qingjie Meng Wenjia Bai D. O’Regan and Daniel Rueckert 3DH 37 8 0 25 Sep 2023
OneSeg: Self-learning and One-shot Learning based Single-slice Annotation for 3D Medical Image Segmentation YiXuan Wu B. Zheng Jintai Chen Danny Chen Jian Wu 27 1 0 24 Sep 2023
A mirror-Unet architecture for PET/CT lesion segmentation Yamila Rotstein Habarnau Mauro Namías 13 0 0 23 Sep 2023
PI-RADS v2 Compliant Automated Segmentation of Prostate Zones Using co-training Motivated Multi-task Dual-Path CNN Arnab Das Suhita Ghosh Sebastian Stober 19 0 0 22 Sep 2023
UPL-SFDA: Uncertainty-aware Pseudo Label Guided Source-Free Domain Adaptation for Medical Image Segmentation Jianghao Wu Guotai Wang Ran Gu Tao Lu Yinan Chen Wentao Zhu Tom Kamiel Magda Vercauteren Sébastien Ourselin Shaoting Zhang MedIm OOD 25 22 0 19 Sep 2023
Integration of Swin UNETR and statistical shape modeling for a semi-automated segmentation of the knee and biomechanical modeling of articular cartilage Reza Kakavand Mehrdad Palizi Peyman Tahghighi Reza Ahmadi Neha Gianchandani S. Adeeb Roberto Souza W. B. Edwards Amin Komeili 25 4 0 18 Sep 2023
Scribble-based 3D Multiple Abdominal Organ Segmentation via Triple-branch Multi-dilated Network with Pixel- and Class-wise Consistency Meng Han Xiangde Luo Wenjun Liao Shichuan Zhang Shaoting Zhang Guotai Wang 47 7 0 18 Sep 2023
3D SA-UNet: 3D Spatial Attention UNet with 3D ASPP for White Matter Hyperintensities Segmentation Changlu Guo 24 0 0 15 Sep 2023
A Localization-to-Segmentation Framework for Automatic Tumor Segmentation in Whole-Body PET/CT Images Linghan Cai Jianhao Huang Zihang Zhu Jinpeng Lu Yongbing Zhang 18 1 0 11 Sep 2023
3D Implicit Transporter for Temporally Consistent Keypoint Discovery Chengliang Zhong Yuhang Zheng Yupeng Zheng Hao Zhao Li Yi ... Pengfei Li Guyue Zhou Chao Yang Xinliang Zhang Jian Zhao 3DPC 37 15 0 10 Sep 2023
Enhancing Hierarchical Transformers for Whole Brain Segmentation with Intracranial Measurements Integration Xin Yu Yucheng Tang Qi Yang Ho Hin Lee Shunxing Bao Yuankai Huo Bennett A. Landman 33 1 0 08 Sep 2023
Kidney abnormality segmentation in thorax-abdomen CT scans Gabriel Efrain Humpire Mamani Nikolas Lessmann E. Scholten Mathias Prokop Colin Jacobs Bram van Ginneken 34 1 0 06 Sep 2023
SADIR: Shape-Aware Diffusion Models for 3D Image Reconstruction Nivetha Jayakumar Tonmoy Hossain Miaomiao Zhang DiffM 49 6 0 06 Sep 2023
Emphysema Subtyping on Thoracic Computed Tomography Scans using Deep Neural Networks Weiyi Xie Colin Jacobs Jean-Paul Charbonnier D. Slebos Bram van Ginneken 17 5 0 05 Sep 2023
DEEPBEAS3D: Deep Learning and B-Spline Explicit Active Surfaces Helena Williams J. Pedrosa Muhammad Asad L. Cattani Tom Kamiel Magda Vercauteren Jan Deprest Jan D'hooge 25 0 0 05 Sep 2023
INCEPTNET: Precise And Early Disease Detection Application For Medical Images Analyses Amirhossein Sajedi Mohammad Javad Fadaeieslam 18 0 0 05 Sep 2023
Analyzing domain shift when using additional data for the MICCAI KiTS23 Challenge George Stoica Mihaela Breaban Vlad Barbu OOD 11 2 0 05 Sep 2023
Photonic Structures Optimization Using Highly Data-Efficient Deep Learning: Application To Nanofin And Annular Groove Phase Masks Nicolas Roy L. König O. Absil Charlotte Beauthier Alexandre Mayer M. Lobet 24 0 0 05 Sep 2023
On the Localization of Ultrasound Image Slices within Point Distribution Models Lennart Bastian Vincent Burgin Ha Young Kim Alexander Baumann Benjamin Busam Mahdi Saleh Nassir Navab 19 2 0 01 Sep 2023
STint: Self-supervised Temporal Interpolation for Geospatial Data Nidhin Harilal B. Hodge Aneesh Subramanian C. Monteleoni 48 1 0 31 Aug 2023
MedShapeNet -- A Large-Scale Dataset of 3D Medical Shapes for Computer Vision Jianning Li Zongwei Zhou Jiancheng Yang Antonio Pepe Christina Schwarz-Gsaxner ... B. Puladi Pascal Fua Alan Yuille Jens Kleesiek Jan Egger MedIm 3DH 31 32 0 30 Aug 2023
Using deep learning for an automatic detection and classification of the vascular bifurcations along the Circle of Willis Rafic Nader Romain Bourcier F. Autrusseau 30 8 0 29 Aug 2023
AI-Generated Content (AIGC) for Various Data Modalities: A Survey Lin Geng Foo Hossein Rahmani Jing Liu 78 31 0 27 Aug 2023
IP-UNet: Intensity Projection UNet Architecture for 3D Medical Volume Segmentation Nyothiri Aung Mohand Tahar Kechadi Liming Chen Sahraoui Dhelim 29 4 0 24 Aug 2023
TAI-GAN: Temporally and Anatomically Informed GAN for early-to-late frame conversion in dynamic cardiac PET motion correction Xueqi Guo Luyao Shi Xiongchao Chen Bo Zhou Qiong Liu ... Edward J. Miller Albert J Sinusas Bruce Spottiswoode Chi Liu Nicha Dvornek MedIm 38 1 0 23 Aug 2023
Learning to In-paint: Domain Adaptive Shape Completion for 3D Organ Segmentation Mingjin Chen Yongkang He Yongyi Lu Zhi-Yi Yang MedIm 23 1 0 17 Aug 2023
Prediction of post-radiotherapy recurrence volumes in head and neck squamous cell carcinoma using 3D U-Net segmentation Denis Kutnár I. Vogelius K. Håkansson Jens Petersen J. Friborg L. Specht M. Bernsdorf A. Gothelf C. Kristensen Abraham George Smith 8 0 0 16 Aug 2023
AATCT-IDS: A Benchmark Abdominal Adipose Tissue CT Image Dataset for Image Denoising, Semantic Segmentation, and Radiomics Evaluation Zhiyu Ma Chen Li Tianming Du Le Zhang Dechao Tang ... Zhihao Chen Jingjing Yuan Qi Nie M. Grzegorzek Hongzan Sun 58 4 0 16 Aug 2023
CCD-3DR: Consistent Conditioning in Diffusion for Single-Image 3D Reconstruction Yan Di Chenyang Zhang Pengyuan Wang Guangyao Zhai Ruida Zhang Fabian Manhardt Benjamin Busam Xiangyang Ji F. Tombari DiffM 31 11 0 15 Aug 2023
Radiomics-Informed Deep Learning for Classification of Atrial Fibrillation Sub-Types from Left-Atrium CT Volumes Weihang Dai Xuelong Li Taihui Yu Di Zhao Jun Shen Kwang-Ting Cheng 29 0 0 14 Aug 2023
ModelScope Text-to-Video Technical Report Jiuniu Wang Hangjie Yuan Dayou Chen Yingya Zhang Xiang Wang Shiwei Zhang VGen DiffM 38 392 0 12 Aug 2023
CATS v2: Hybrid encoders for robust medical segmentation Hao Li Han Liu Dewei Hu Xing Yao Jiacheng Wang I. Oguz MedIm ViT 32 2 0 11 Aug 2023
From CNN to Transformer: A Review of Medical Image Segmentation Models Wenjian Yao Jiajun Bai Wei Liao Yuheng Chen Mengjuan Liu Yao Xie ViT MedIm 25 45 0 10 Aug 2023
Scene-Generalizable Interactive Segmentation of Radiance Fields Songlin Tang Wenjie Pei Xin Tao Tanghui Jia Guangming Lu Yu-Wing Tai 25 11 0 09 Aug 2023
DefCor-Net: Physics-Aware Ultrasound Deformation Correction Zhongliang Jiang Yue Zhou Dongliang Cao Nassir Navab 30 11 0 07 Aug 2023
Redesigning Out-of-Distribution Detection on 3D Medical Images A. Vasiliuk Daria Frolova Mikhail Belyaev B. Shirokikh OOD 34 5 0 07 Aug 2023
Weakly supervised segmentation of intracranial aneurysms using a novel 3D focal modulation UNet Amir Rasoulian Arash Harirpoush Soorena Salari Yiming Xiao 29 1 0 06 Aug 2023
CartiMorph: a framework for automated knee articular cartilage morphometrics Yongcheng Yao Jun-Wu Zhong Lu Zhang Sheheryar Khan Weitian Chen 36 3 0 03 Aug 2023
ScribbleVC: Scribble-supervised Medical Image Segmentation with Vision-Class Embedding Zihan Li Yuan Zheng Xiangde Luo Dandan Shan Qingqi Hong 31 22 0 30 Jul 2023
Cross-dimensional transfer learning in medical image segmentation with deep learning Hicham Messaoudi Ahror Belaid Douraied BEN SALEM Pierre-Henri Conze MedIm 30 24 0 29 Jul 2023
AC-Norm: Effective Tuning for Medical Image Analysis via Affine Collaborative Normalization Chuyan Zhang Yuncheng Yang Hao Zheng Yun Gu 52 0 0 28 Jul 2023
Learning with Constraint Learning: New Perspective, Solution Strategy and Various Applications Risheng Liu Jiaxin Gao Xuan Liu Xin-Yue Fan 40 9 0 28 Jul 2023
One-shot Joint Extraction, Registration and Segmentation of Neuroimaging Data Yao Su Zhentian Qian Lei Ma Lifang He Xiangnan Kong 29 2 0 27 Jul 2023
Towards Unifying Anatomy Segmentation: Automated Generation of a Full-body CT Dataset via Knowledge Aggregation and Anatomical Guidelines A. Jaus C. Seibold Kelsey Hermann Alexandra Walter K. Giske Johannes Haubold Jens Kleesiek Rainer Stiefelhagen 47 19 0 25 Jul 2023