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NegBio: a high-performance tool for negation and uncertainty detection
  in radiology reports
v1v2 (latest)

NegBio: a high-performance tool for negation and uncertainty detection in radiology reports

16 December 2017
Yifan Peng
Xiaosong Wang
Le Lu
M. Bagheri
Ronald M. Summers
Zhiyong Lu
    MedImUQCV
ArXiv (abs)PDFHTML

Papers citing "NegBio: a high-performance tool for negation and uncertainty detection in radiology reports"

50 / 92 papers shown
Title
VLM-KG: Multimodal Radiology Knowledge Graph Generation
VLM-KG: Multimodal Radiology Knowledge Graph Generation
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Seong Tae Kim
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13 May 2025
IP-CRR: Information Pursuit for Interpretable Classification of Chest Radiology Reports
IP-CRR: Information Pursuit for Interpretable Classification of Chest Radiology Reports
Yuyan Ge
Kwan Ho Ryan Chan
Pablo Messina
René Vidal
62
0
0
30 Apr 2025
A Reality Check of Vision-Language Pre-training in Radiology: Have We Progressed Using Text?
A Reality Check of Vision-Language Pre-training in Radiology: Have We Progressed Using Text?
Julio Silva-Rodríguez
Jose Dolz
Ismail ben Ayed
VLMMedIm
88
0
0
07 Apr 2025
Annotating Scientific Uncertainty: A comprehensive model using linguistic patterns and comparison with existing approaches
Panggih Kusuma Ningrum
Philipp Mayr
N. Smirnova
Iana Atanassova
UQLM
85
1
0
14 Mar 2025
CoRPA: Adversarial Image Generation for Chest X-rays Using Concept Vector Perturbations and Generative Models
CoRPA: Adversarial Image Generation for Chest X-rays Using Concept Vector Perturbations and Generative Models
Amy Rafferty
Rishi Ramaesh
Ajitha Rajan
MedImAAML
147
0
0
04 Feb 2025
Neuradicon: operational representation learning of neuroimaging reports
Neuradicon: operational representation learning of neuroimaging reports
Henry Watkins
Robert J. Gray
Adam Julius
Y. Mah
W. H. Pinaya
...
Jorge M. Cardoso
Sebastien Ourselin
Geraint Rees
Rolf Jaeger
P. Nachev
MedIm
495
3
0
20 Jan 2025
VILA-M3: Enhancing Vision-Language Models with Medical Expert Knowledge
VILA-M3: Enhancing Vision-Language Models with Medical Expert Knowledge
Vishwesh Nath
Wenqi Li
Dong Yang
Andriy Myronenko
Mingxin Zheng
...
Holger Roth
Daguang Xu
Baris Turkbey
Holger Roth
Daguang Xu
VLM
191
7
0
19 Nov 2024
Automated Spinal MRI Labelling from Reports Using a Large Language Model
Automated Spinal MRI Labelling from Reports Using a Large Language Model
Robin Y. Park
Rhydian Windsor
A. Jamaludin
Andrew Zisserman
47
1
0
22 Oct 2024
Enhancing disease detection in radiology reports through fine-tuning
  lightweight LLM on weak labels
Enhancing disease detection in radiology reports through fine-tuning lightweight LLM on weak labels
Yishu Wei
Xindi Wang
Hanley Ong
Yiliang Zhou
Adam Flanders
George Shih
Yifan Peng
AI4MHLM&MA
76
2
0
25 Sep 2024
Can Rule-Based Insights Enhance LLMs for Radiology Report
  Classification? Introducing the RadPrompt Methodology
Can Rule-Based Insights Enhance LLMs for Radiology Report Classification? Introducing the RadPrompt Methodology
Panagiotis Fytas
Anna Breger
Ian Selby
Simon Baker
Shahab Shahipasand
Anna Korhonen
60
0
0
07 Aug 2024
X-ray Made Simple: Lay Radiology Report Generation and Robust Evaluation
X-ray Made Simple: Lay Radiology Report Generation and Robust Evaluation
Kun Zhao
Chenghao Xiao
Chen Tang
Bohao Yang
Kai Ye
Noura Al Moubayed
Liang Zhan
Chenghua Lin
86
0
0
25 Jun 2024
Self-supervised vision-langage alignment of deep learning
  representations for bone X-rays analysis
Self-supervised vision-langage alignment of deep learning representations for bone X-rays analysis
A. Englebert
Anne-Sophie Collin
O. Cornu
Christophe De Vleeschouwer
74
1
0
14 May 2024
Topicwise Separable Sentence Retrieval for Medical Report Generation
Topicwise Separable Sentence Retrieval for Medical Report Generation
Junting Zhao
Yang Zhou
Zhihao Chen
Huazhu Fu
Liang Wan
MedIm
57
1
0
07 May 2024
Negation Triplet Extraction with Syntactic Dependency and Semantic
  Consistency
Negation Triplet Extraction with Syntactic Dependency and Semantic Consistency
Yuchen Shi
Deqing Yang
Jingping Liu
Yanghua Xiao
Zongyu Wang
Huimin Xu
62
0
0
15 Apr 2024
A Disease Labeler for Chinese Chest X-Ray Report Generation
A Disease Labeler for Chinese Chest X-Ray Report Generation
Mengwei Wang
Ruixin Yan
Zeyi Hou
Ning Lang
Xiuzhuang Zhou
41
0
0
18 Mar 2024
How Well Do Multi-modal LLMs Interpret CT Scans? An Auto-Evaluation
  Framework for Analyses
How Well Do Multi-modal LLMs Interpret CT Scans? An Auto-Evaluation Framework for Analyses
Qingqing Zhu
Benjamin Hou
T. Mathai
Pritam Mukherjee
Qiao Jin
Preslav Nakov
Zhizheng Wang
Ruida Cheng
Ronald M. Summers
Zhiyong Lu
74
0
0
08 Mar 2024
Enhancing chest X-ray datasets with privacy-preserving large language
  models and multi-type annotations: a data-driven approach for improved
  classification
Enhancing chest X-ray datasets with privacy-preserving large language models and multi-type annotations: a data-driven approach for improved classification
Ricardo Bigolin Lanfredi
Pritam Mukherjee
Ronald M. Summers
66
5
0
06 Mar 2024
Vision-Language Models for Medical Report Generation and Visual Question
  Answering: A Review
Vision-Language Models for Medical Report Generation and Visual Question Answering: A Review
Iryna Hartsock
Ghulam Rasool
102
80
0
04 Mar 2024
Exploring Low-Resource Medical Image Classification with Weakly
  Supervised Prompt Learning
Exploring Low-Resource Medical Image Classification with Weakly Supervised Prompt Learning
Fudan Zheng
Jindong Cao
Weijiang Yu
Zhiguang Chen
Nong Xiao
Yutong Lu
VLMMedIm
53
19
0
06 Feb 2024
CheX-GPT: Harnessing Large Language Models for Enhanced Chest X-ray
  Report Labeling
CheX-GPT: Harnessing Large Language Models for Enhanced Chest X-ray Report Labeling
Jawook Gu
Hankyu Cho
Jiho Kim
Kihyun You
Eun K. Hong
Byungseok Roh
89
6
0
21 Jan 2024
CLIP in Medical Imaging: A Comprehensive Survey
CLIP in Medical Imaging: A Comprehensive Survey
Zihao Zhao
Yuxiao Liu
Han Wu
Yonghao Li
Sheng Wang
L. Teng
Disheng Liu
Zhiming Cui
Qian Wang
Dinggang Shen
CLIPMedImLM&MAVLM
156
8
0
12 Dec 2023
A Systematic Review of Deep Learning-based Research on Radiology Report
  Generation
A Systematic Review of Deep Learning-based Research on Radiology Report Generation
Chang Liu
Yuanhe Tian
Yan Song
MedIm
115
16
0
23 Nov 2023
Foundation Ark: Accruing and Reusing Knowledge for Superior and Robust
  Performance
Foundation Ark: Accruing and Reusing Knowledge for Superior and Robust Performance
Dongao Ma
Jiaxuan Pang
Michael B. Gotway
Jianming Liang
MedImOOD
67
10
0
14 Oct 2023
Reconstruction of Patient-Specific Confounders in AI-based Radiologic
  Image Interpretation using Generative Pretraining
Reconstruction of Patient-Specific Confounders in AI-based Radiologic Image Interpretation using Generative Pretraining
T. Han
Laura vZigutyt.e
L. Huck
M. Huppertz
R. Siepmann
...
Firas Khader
Christiane Kuhl
S. Nebelung
Jakob Kather
Daniel Truhn
MedIm
84
3
0
29 Sep 2023
MultiModN- Multimodal, Multi-Task, Interpretable Modular Networks
MultiModN- Multimodal, Multi-Task, Interpretable Modular Networks
Vinitra Swamy
Malika Satayeva
Jibril Frej
Thierry Bossy
Thijs Vogels
Martin Jaggi
Tanja Käser
Mary-Anne Hartley
68
14
0
25 Sep 2023
UniBrain: Universal Brain MRI Diagnosis with Hierarchical
  Knowledge-enhanced Pre-training
UniBrain: Universal Brain MRI Diagnosis with Hierarchical Knowledge-enhanced Pre-training
Jiayu Lei
Lisong Dai
Haoyun Jiang
Chaoyi Wu
Xiaoman Zhang
...
Weidi Xie
Yanyong Zhang
Yuehua Li
Ya Zhang
Yanfeng Wang
71
11
0
13 Sep 2023
Enhancing Network Initialization for Medical AI Models Using
  Large-Scale, Unlabeled Natural Images
Enhancing Network Initialization for Medical AI Models Using Large-Scale, Unlabeled Natural Images
Soroosh Tayebi Arasteh
Leo Misera
Jakob Nikolas Kather
Daniel Truhn
S. Nebelung
79
9
0
15 Aug 2023
RadGraph2: Modeling Disease Progression in Radiology Reports via
  Hierarchical Information Extraction
RadGraph2: Modeling Disease Progression in Radiology Reports via Hierarchical Information Extraction
Sameer Tajdin Khanna
Adam Dejl
Kibo Yoon
Q. H. Truong
Han G. Duong
Agustina Saenz
Pranav Rajpurkar
41
10
0
09 Aug 2023
Knowledge Boosting: Rethinking Medical Contrastive Vision-Language
  Pre-Training
Knowledge Boosting: Rethinking Medical Contrastive Vision-Language Pre-Training
Xiaofei Chen
Yuting He
Cheng Xue
Rongjun Ge
Shuo Li
Guanyu Yang
VLMMedIm
85
13
0
14 Jul 2023
Several categories of Large Language Models (LLMs): A Short Survey
Several categories of Large Language Models (LLMs): A Short Survey
Saurabh Pahune
Manoj Chandrasekharan
AILaw
47
17
0
05 Jul 2023
An empirical study of using radiology reports and images to improve ICU
  mortality prediction
An empirical study of using radiology reports and images to improve ICU mortality prediction
Ming-Yen Lin
Song Wang
Ying Ding
Lihui Zhao
Fei Wang
Yifan Peng
53
11
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20 Jun 2023
Knowledge-enhanced Visual-Language Pre-training on Chest Radiology
  Images
Knowledge-enhanced Visual-Language Pre-training on Chest Radiology Images
Xiaoman Zhang
Chaoyi Wu
Ya Zhang
Yanfeng Wang
Weidi Xie
MedIm
104
137
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Improving Medical Speech-to-Text Accuracy with Vision-Language
  Pre-training Model
Improving Medical Speech-to-Text Accuracy with Vision-Language Pre-training Model
Jaeyoung Huh
Sangjoon Park
Jeonghyeon Lee
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45
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MedKLIP: Medical Knowledge Enhanced Language-Image Pre-Training in
  Radiology
MedKLIP: Medical Knowledge Enhanced Language-Image Pre-Training in Radiology
Chaoyi Wu
Xiaoman Zhang
Ya Zhang
Yanfeng Wang
Weidi Xie
LM&MAVLM
114
120
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05 Jan 2023
Attend Who is Weak: Pruning-assisted Medical Image Localization under
  Sophisticated and Implicit Imbalances
Attend Who is Weak: Pruning-assisted Medical Image Localization under Sophisticated and Implicit Imbalances
Ajay Jaiswal
Tianlong Chen
Justin F. Rousseau
Yifan Peng
Ying Ding
Zhangyang Wang
69
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Collaborative Training of Medical Artificial Intelligence Models with
  non-uniform Labels
Collaborative Training of Medical Artificial Intelligence Models with non-uniform Labels
Soroosh Tayebi Arasteh
P. Isfort
Marwin Saehn
Gustav Mueller-Franzes
Firas Khader
Jakob Nikolas Kather
Christiane Kuhl
S. Nebelung
Daniel Truhn
FedML
102
18
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24 Nov 2022
MedCLIP: Contrastive Learning from Unpaired Medical Images and Text
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Zifeng Wang
Zhenbang Wu
Dinesh Agarwal
Jimeng Sun
CLIPVLMMedIm
129
434
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Not another Negation Benchmark: The NaN-NLI Test Suite for Sub-clausal
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Not another Negation Benchmark: The NaN-NLI Test Suite for Sub-clausal Negation
Thinh Hung Truong
Yulia Otmakhova
Tim Baldwin
Trevor Cohn
Jey Han Lau
Karin Verspoor
116
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Medical Image Captioning via Generative Pretrained Transformers
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Alexander Selivanov
Oleg Y. Rogov
Daniil Chesakov
Artem Shelmanov
Irina Fedulova
Dmitry V. Dylov
MedIm
99
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0
28 Sep 2022
Learning to diagnose common thorax diseases on chest radiographs from
  radiology reports in Vietnamese
Learning to diagnose common thorax diseases on chest radiographs from radiology reports in Vietnamese
Thao T. B. Nguyen
T. M. Vo
Thang V. Nguyen
Hieu H. Pham
H. Nguyen
82
4
0
11 Sep 2022
Negation detection in Dutch clinical texts: an evaluation of rule-based
  and machine learning methods
Negation detection in Dutch clinical texts: an evaluation of rule-based and machine learning methods
Bram van Es
L. Reteig
Sander C Tan
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Myrthe M. Hemker
S. R. Arends
Miguel Rios
S. Haitjema
50
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Long-Tailed Classification of Thorax Diseases on Chest X-Ray: A New
  Benchmark Study
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G. Holste
Song Wang
Ziyu Jiang
Thomas C. Shen
George Shih
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Radiomics-Guided Global-Local Transformer for Weakly Supervised
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Anatomy-Guided Weakly-Supervised Abnormality Localization in Chest
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Improving negation detection with negation-focused pre-training
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Hierarchical Annotation for Building A Suite of Clinical Natural
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Radiology Text Analysis System (RadText): Architecture and Evaluation
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MMLN: Leveraging Domain Knowledge for Multimodal Diagnosis
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Learning Semi-Structured Representations of Radiology Reports
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A Scoping Review of Publicly Available Language Tasks in Clinical
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121
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