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Cell Detection with Star-convex Polygons

9 June 2018

Papers citing "Cell Detection with Star-convex Polygons"

50 / 142 papers shown

Title
The Four Color Theorem for Cell Instance Segmentation Ye Zhang Yu Zhou Yifeng Wang Jun Xiao Ziyue Wang Yongbing Zhang Jianxu Chen ISeg 32 0 0 11 Jun 2025
Image-Based Method For Measuring And Classification Of Iron Ore Pellets Using Star-Convex Polygons Artem Solomko Oleg Kartashev Andrey Golov Mikhail Deulin Vadim Valynkin Vasily Kharin 12 0 0 10 Jun 2025
SAMJ: Fast Image Annotation on ImageJ/Fiji via Segment Anything Model Carlos Garcia-Lopez-de-Haro Caterina Fuster-Barcelo Curtis T. Rueden Jonathan Heras Vladimir Ulman ... Kevin W. Eliceiri Jean-Christophe Olivo-Marin Jean-Yves Tinevez Daniel Sage A. Muñoz-Barrutia VLM 47 0 0 03 Jun 2025
Uni-AIMS: AI-Powered Microscopy Image Analysis Yanhui Hong Nan Wang Zhiyi Xia Haoyi Tao Xi Fang ... Shengyu Li Ziqi Chen Zezhong Zhang Guolin Ke Linfeng Zhang 52 0 0 11 May 2025
RepSNet: A Nucleus Instance Segmentation model based on Boundary Regression and Structural Re-parameterization Shengchun Xiong Xiangru Li Yunpeng Zhong Wanfen Peng 280 1 0 08 May 2025
AI Assisted Cervical Cancer Screening for Cytology Samples in Developing Countries Love Panta Suraj Prasai Karishma Malla Vaidya Shyam Shrestha Suresh Manandhar 120 0 0 29 Apr 2025
Automating tumor-infiltrating lymphocyte assessment in breast cancer histopathology images using QuPath: a transparent and accessible machine learning pipeline M. Tafavvoghi L. A. Bongo André Berli Delgado N. Shvetsov Anders Sildnes Line Moi Lill-ToveRasmussen Busund Kajsa Møllersen 87 0 0 23 Apr 2025
Single-shot Star-convex Polygon-based Instance Segmentation for Spatially-correlated Biomedical Objects Trina De Adrian Urbanski Artur Yakimovich 59 0 0 16 Apr 2025
A Comparison of Deep Learning Methods for Cell Detection in Digital Cytology Marco Acerbis Natasa Sladoje Joakim Lindblad 53 0 0 09 Apr 2025
EAP4EMSIG -- Enhancing Event-Driven Microscopy for Microfluidic Single-Cell Analysis Nils Friederich Angelo Jovin Yamachui Sitcheu Annika Nassal Erenus Yildiz Matthias Pesch ... D. Kohlheyer Hanno Scharr Johannes Seiffarth K. Nöh Ralf Mikut 73 0 0 30 Mar 2025
CyclePose -- Leveraging Cycle-Consistency for Annotation-Free Nuclei Segmentation in Fluorescence Microscopy Jonas Utz Stefan Vocht Anne Tjorven Buessen Dennis Possart Fabian Wagner Mareike Thies Mingxuan Gu S. Uderhardt Katharina Breininger MedIm 119 0 0 14 Mar 2025
COIN: Confidence Score-Guided Distillation for Annotation-Free Cell Segmentation Sanghyun Jo Seo Jin Lee Seungwoo Lee Seohyung Hong Hyungseok Seo Kyungsu Kim 80 0 0 14 Mar 2025
Self-Supervised Z-Slice Augmentation for 3D Bio-Imaging via Knowledge Distillation Alessandro Pasqui Sajjad Mahdavi Benoit Vianay Alexandra Colin Alex McDougall Rémi Dumollard Yekaterina A. Miroshnikova Elsa Labrune Hervé Turlier MedIm 63 0 0 05 Mar 2025
HistoSmith: Single-Stage Histology Image-Label Generation via Conditional Latent Diffusion for Enhanced Cell Segmentation and Classification V. Vadori Jean-Marie Graic A. Peruffo L. Finos Ujwala Kiran Chaudhari Enrico Grisan DiffM MedIm 137 0 0 12 Feb 2025
Sequence models for continuous cell cycle stage prediction from brightfield images Louis-Alexandre Leger Maxine Leonardi Andrea Salati Felix Naef Martin Weigert 98 1 0 04 Feb 2025
CellSeg1: Robust Cell Segmentation with One Training Image Peilin Zhou Bo Du Yongchao Xu VLM 105 2 0 02 Dec 2024
Enhancing frozen histological section images using permanent-section-guided deep learning with nuclei attention Elad Yoshai Gil Goldinger M. Haifler N. Shaked MedIm 158 1 0 10 Nov 2024
Self-supervised Representation Learning for Cell Event Recognition through Time Arrow Prediction Cangxiong Chen Vinay P. Namboodiri Julia E. Sero 56 0 0 06 Nov 2024
Cellpose+, a morphological analysis tool for feature extraction of stained cell images Israel A. Huaman Fares D. E. Ghorabe Sofya S. Chumakova Alexandra A. Pisarenko Alexey E. Dudaev ... Galina A. Ryltseva Sviatlana A. Ulasevich Ekaterina I. Shishatskaya Ekaterina V. Skorb Pavel S. Zun 40 0 0 24 Oct 2024
Automated Segmentation and Analysis of Cone Photoreceptors in Multimodal Adaptive Optics Imaging Prajol Shrestha Mikhail Kulyabin Aline Sindel Hilde Pedersen Stuart Gilson R. Baraas Andreas Maier 27 0 0 19 Oct 2024
3D Segmentation of Neuronal Nuclei and Cell-Type Identification using Multi-channel Information Antonio LaTorre Lidia Alonso-Nanclares J. Peña Javier De Felipe 147 3 0 04 Oct 2024
Efficient Microscopic Image Instance Segmentation for Food Crystal Quality Control Xiaoyu Ji Jan P Allebach Ali Shakouri Fengqing Zhu 45 0 0 26 Sep 2024
InstanSeg: an embedding-based instance segmentation algorithm optimized for accurate, efficient and portable cell segmentation Thibaut Goldsborough Ben Philps Alan O'Callaghan Fiona Inglis Leo Leplat Andrew Filby Hakan Bilen Peter Bankhead 77 6 0 28 Aug 2024
Generalist Segmentation Algorithm for Photoreceptors Analysis in Adaptive Optics Imaging Mikhail Kulyabin Aline Sindel Hilde Pedersen Stuart Gilson R. Baraas Andreas Maier 144 1 0 27 Aug 2024
NuSegDG: Integration of Heterogeneous Space and Gaussian Kernel for Domain-Generalized Nuclei Segmentation Zhenye Lou Qing Xu Zekun Jiang Xiangjian He Z. Chen Yi Wang Chenxin Li Maggie M. He Wenting Duan 92 1 0 21 Aug 2024
A Survey on Cell Nuclei Instance Segmentation and Classification: Leveraging Context and Attention João D. Nunes D. Montezuma Domingos Oliveira Tania Pereira Jaime S. Cardoso 92 1 0 26 Jul 2024
PFPs: Prompt-guided Flexible Pathological Segmentation for Diverse Potential Outcomes Using Large Vision and Language Models Can Cui Ruining Deng Junlin Guo Quan Liu Tianyuan Yao Haichun Yang Yuankai Huo VLM MedIm 61 1 0 13 Jul 2024
Histopathological Image Classification with Cell Morphology Aware Deep Neural Networks Andrey D. Ignatov Josephine Yates Valentina Boeva 88 4 0 11 Jul 2024
qlty: handling large tensors in scientific imaging Petrus Zwart VLM 47 3 0 06 Jul 2024
SR-CACO-2: A Dataset for Confocal Fluorescence Microscopy Image Super-Resolution Soufiane Belharbi Mara K M Whitford Phuong Hoang Shakeeb Murtaza Luke McCaffrey Eric Granger 68 0 0 13 Jun 2024
QuST: QuPath Extension for Integrative Whole Slide Image and Spatial Transcriptomics Analysis Chao-Hui Huang 49 2 0 31 May 2024
DenseSeg: Joint Learning for Semantic Segmentation and Landmark Detection Using Dense Image-to-Shape Representation Ron Keuth Lasse Hansen Maren Balks Ronja Jäger Anne-Nele Schröder Ludger Tüshaus Mattias P. Heinrich 110 0 0 30 May 2024
Trackastra: Transformer-based cell tracking for live-cell microscopy Benjamin Gallusser Martin Weigert ViT VOT 80 13 0 24 May 2024
BiomedParse: a biomedical foundation model for image parsing of everything everywhere all at once Theodore Zhao Yu Gu Jianwei Yang Naoto Usuyama Ho Hin Lee ... B. Piening Carlo Bifulco Mu-Hsin Wei Hoifung Poon Sheng Wang MedIm 84 28 0 21 May 2024
Chameleon: A Data-Efficient Generalist for Dense Visual Prediction in the Wild Donggyun Kim Seongwoong Cho Semin Kim Chong Luo Seunghoon Hong VLM 88 3 0 29 Apr 2024
ViM-UNet: Vision Mamba for Biomedical Segmentation Anwai Archit Constantin Pape Mamba 72 10 0 11 Apr 2024
HEMIT: H&E to Multiplex-immunohistochemistry Image Translation with Dual-Branch Pix2pix Generator Chang Bian Beth Philips T. Cootes Martin Fergie MedIm 117 3 0 27 Mar 2024
Correlation Clustering of Organoid Images Jannik Presberger Rashmiparvathi Keshara David Stein Yung Hae Kim A. Grapin-Botton Bjoern Andres 71 3 0 20 Mar 2024
A Unified Framework for Microscopy Defocus Deblur with Multi-Pyramid Transformer and Contrastive Learning Yuelin Zhang Pengyu Zheng Wanquan Yan Chengyu Fang Shing Shin Cheng MedIm 103 8 0 05 Mar 2024
Few-shot adaptation for morphology-independent cell instance segmentation Ram J. Zaveri Voke Brume Gianfranco Doretto 53 0 0 27 Feb 2024
Comparative Evaluation of Traditional and Deep Learning-Based Segmentation Methods for Spoil Pile Delineation Using UAV Images Sureka Thiruchittampalam B. Banerjee Nancy F. Glenn S. Raval 37 1 0 01 Feb 2024
Cyto R-CNN and CytoNuke Dataset: Towards reliable whole-cell segmentation in bright-field histological images Johannes Raufeisen Kunpeng Xie Fabian Horst Till Braunschweig Jianning Li ... Jan Egger Bastian Leibe Frank Hölzle Alexander Hermans B. Puladi 98 0 0 28 Jan 2024
SEINE: Structure Encoding and Interaction Network for Nuclei Instance Segmentation Ye Zhang Linghan Cai Ziyue Wang Yongbing Zhang 72 2 0 18 Jan 2024
Morphological Profiling for Drug Discovery in the Era of Deep Learning Qiaosi Tang R. Ratnayake Gustavo Seabra Zhe Jiang Ruogu Fang ... Tamer Kahveci Jiang Bian Chenglong Li H. Luesch Yanjun Li 70 4 0 13 Dec 2023
Unleashing the Power of Prompt-driven Nucleus Instance Segmentation Zhongyi Shui Yunlong Zhang Kai Yao Chenglu Zhu Sunyi Zheng Jingxiong Li Honglin Li Yuxuan Sun Ruizhe Guo Lin Yang 88 12 0 27 Nov 2023
NCL-SM: A Fully Annotated Dataset of Images from Human Skeletal Muscle Biopsies Atif Khan Conor Lawless Amy Vincent Charlotte Warren Valeria Di Leo Tiago Gomes A. Mcgough 54 1 0 25 Nov 2023
Unsupervised high-throughput segmentation of cells and cell nuclei in quantitative phase images Julia Sistermanns Ellen Emken Gregor Weirich Oliver Hayden Wolfgang Utschick 49 0 0 24 Nov 2023
Introducing NCL-SM: A Fully Annotated Dataset of Images from Human Skeletal Muscle Biopsies Atif Khan Conor Lawless Amy Vincent Charlotte Warren Valeria Di Leo Tiago Gomes A. Mcgough 15 0 0 18 Nov 2023
LymphoML: An interpretable artificial intelligence-based method identifies morphologic features that correlate with lymphoma subtype V. Shankar Xiaoli Yang Vrishab Krishna Brent Tan Oscar Silva ... Edward L Briercheck D. Weinstock Y. Natkunam S. Fernandez-Pol Pranav Rajpurkar 30 6 0 16 Nov 2023
Defining the boundaries: challenges and advances in identifying cells in microscopy images Nodar Gogoberidze Beth A. Cimini 69 5 0 14 Nov 2023