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Cell Detection with Star-convex Polygons

9 June 2018

Papers citing "Cell Detection with Star-convex Polygons"

42 / 142 papers shown

Title
Nuclei instance segmentation and classification in histopathology images with StarDist Martin Weigert Uwe Schmidt 77 57 0 03 Mar 2022
ConvNeXt-backbone HoVerNet for nuclei segmentation and classification Jiachen Li Chixin Wang Banban Huang Zekun Zhou 44 12 0 28 Feb 2022
Nuclei Segmentation with Point Annotations from Pathology Images via Self-Supervised Learning and Co-Training Yi Lin Z. Qu Hao Chen Zhongke Gao Yuexiang Li Lili Xia Kai Ma Yefeng Zheng Kwang-Ting Cheng 56 27 0 16 Feb 2022
Bubble identification from images with machine learning methods H. Hessenkemper Sebastian Starke Yazan Atassi T. Ziegenhein D. Lucas 66 45 0 07 Feb 2022
Code-free development and deployment of deep segmentation models for digital pathology H. S. Pettersen I. Belevich E. S. Røyset Erik Smistad E. Jokitalo Ingerid Reinertsen I. Bakke André Pedersen 37 14 0 16 Nov 2021
Deep-learning in the bioimaging wild: Handling ambiguous data with deepflash2 M. Griebel Dennis Segebarth N. Stein Nina Schukraft P. Tovote R. Blum C. Flath MedIm 27 2 0 12 Nov 2021
A Light-weight Interpretable Compositional Model for Nuclei Detection and Weakly-Supervised Segmentation Yixiao Zhang Adam Kortylewski Qing Liu Seyoun Park B. Green ... Ryan Walk Sigfredo Soto-Diaz J. Taube A. Szalay Alan Yuille 18 1 0 26 Oct 2021
Hoechst Is All You Need: Lymphocyte Classification with Deep Learning Jessica Cooper I. Um Ognjen Arandjelovic D. Harrison 92 4 0 09 Jul 2021
Stateless actor-critic for instance segmentation with high-level priors P. Hilt Maedeh Zarvandi Edgar Kaziakhmedov Sourabh Bhide Maria Leptin Constantin Pape Anna Kreshuk OffRL 36 0 0 06 Jul 2021
Positive-unlabeled Learning for Cell Detection in Histopathology Images with Incomplete Annotations Zipei Zhao Fengqian Pang Zhiwen Liu Chuyang Ye 49 16 0 30 Jun 2021
Object-Guided Instance Segmentation With Auxiliary Feature Refinement for Biological Images Jingru Yi P. Wu Hui Tang Bo Liu Qiaoying Huang Hui Qu Lianyi Han Wei Fan Daniel J. Hoeppner Dimitris N. Metaxas ISeg 65 16 0 14 Jun 2021
ContourRender: Detecting Arbitrary Contour Shape For Instance Segmentation In One Pass Tutian Tang Wenqiang Xu Ruolin Ye Yanfeng Wang Cewu Lu ISeg 3DV 18 2 0 07 Jun 2021
PolarMask++: Enhanced Polar Representation for Single-Shot Instance Segmentation and Beyond Enze Xie Wenhai Wang Mingyu Ding Ruimao Zhang Ping Luo ISeg 66 59 0 05 May 2021
Robust 3D Cell Segmentation: Extending the View of Cellpose Dennis Eschweiler Richard S. Smith Johannes Stegmaier 43 20 0 03 May 2021
Contour Proposal Networks for Biomedical Instance Segmentation Eric Upschulte Stefan Harmeling Katrin Amunts Timo Dickscheid 62 53 0 07 Apr 2021
Sparse Object-level Supervision for Instance Segmentation with Pixel Embeddings A. Wolny Qin Yu Constantin Pape Anna Kreshuk ISeg 82 21 0 26 Mar 2021
Sequential Learning on Liver Tumor Boundary Semantics and Prognostic Biomarker Mining Jieneng Chen K. Yan Yu-Dong Zhang Youbao Tang Xun Xu ... Lingyun Huang Jing Xiao Alan Yuille Ya Zhang Le Lu 20 2 0 09 Mar 2021
Medical Image Segmentation with Limited Supervision: A Review of Deep Network Models Jialin Peng Ye Wang VLM 90 60 0 28 Feb 2021
Probabilistic Spatial Analysis in Quantitative Microscopy with Uncertainty-Aware Cell Detection using Deep Bayesian Regression of Density Maps Alvaro Gomariz Tiziano Portenier C. Nombela-Arrieta O. Goksel UQCV 53 7 0 23 Feb 2021
CPP-Net: Context-aware Polygon Proposal Network for Nucleus Segmentation Shengcong Chen Changxing Ding Minfeng Liu Jun Cheng Dacheng Tao 85 50 0 13 Feb 2021
Embedding-based Instance Segmentation in Microscopy Manan Lalit P. Tomančák Florian Jug 25 5 0 25 Jan 2021
How Shift Equivariance Impacts Metric Learning for Instance Segmentation J. L. Rumberger Xiaoyan Yu Peter Hirsch Melanie Dohmen Vanessa Emanuela Guarino Ashkan Mokarian Lisa Mais Jan Funke Dagmar Kainmueller 63 6 0 14 Jan 2021
Morphology on categorical distributions S. Ørting H. J. T. Stephensen J. Sporring OOD 11 0 0 14 Dec 2020
Learning Universal Shape Dictionary for Realtime Instance Segmentation Tutian Tang Wenqiang Xu Ruolin Ye Lixin Yang Cewu Lu 43 2 0 02 Dec 2020
MultiStar: Instance Segmentation of Overlapping Objects with Star-Convex Polygons Florin C. Walter Sebastian Damrich Fred Hamprecht 135 16 0 26 Nov 2020
FastPathology: An open-source platform for deep learning-based research and decision support in digital pathology André Pedersen Marit Valla A. Bofin Javier Pérez de Frutos Ingerid Reinertsen Erik Smistad 70 17 0 11 Nov 2020
RDCNet: Instance segmentation with a minimalist recurrent residual network Raphael Ortiz Gustavo de Medeiros A. Peters P. Liberali Markus Rempfler ISeg 116 3 0 02 Oct 2020
Proposal-Free Volumetric Instance Segmentation from Latent Single-Instance Masks Alberto Bailoni Constantin Pape Steffen Wolf Anna Kreshuk Fred Hamprecht ISeg 72 7 0 10 Sep 2020
Improving Pixel Embedding Learning through Intermediate Distance Regression Supervision for Instance Segmentation Yuli Wu Long Chen Dorit Merhof 29 5 0 13 Jul 2020
An interpretable automated detection system for FISH-based HER2 oncogene amplification testing in histo-pathological routine images of breast and gastric cancer diagnostics Sarah Schmell Falk Zakrzewski Walter de Back Martin Weigert Uwe Schmidt ... C. Sperling Ingo Roeder P. Hoenscheid D. Aust G. Baretton 15 2 0 25 May 2020
Learning to segment clustered amoeboid cells from brightfield microscopy via multi-task learning with adaptive weight selection Rituparna Sarkar Suvadip Mukherjee E. Labruyère Jean-Christophe Olivo-Marin 43 11 0 19 May 2020
DenoiSeg: Joint Denoising and Segmentation T. Buchholz M. Prakash Alexander Krull Florian Jug 3DV DiffM 79 62 0 06 May 2020
Instance Segmentation of Biomedical Images with an Object-aware Embedding Learned with Local Constraints Long Chen M. Strauch Dorit Merhof 54 31 0 21 Apr 2020
DistNet: Deep Tracking by displacement regression: application to bacteria growing in the Mother Machine J. Ollion Charles Ollion 43 13 0 17 Mar 2020
PatchPerPix for Instance Segmentation Peter Hirsch Lisa Mais Dagmar Kainmueller 3DV ISeg 64 30 0 21 Jan 2020
Leveraging Self-supervised Denoising for Image Segmentation M. Prakash T. Buchholz Manan Lalit P. Tomančák Florian Jug Alexander Krull 121 18 0 27 Nov 2019
Object-Guided Instance Segmentation for Biological Images Jingru Yi Hui Tang Pengxiang Wu Bo Liu Daniel J. Hoeppner Dimitris N. Metaxas Lianyi Han Wei Fan ISeg 44 19 0 20 Nov 2019
PolarMask: Single Shot Instance Segmentation with Polar Representation Enze Xie Pei Sun Xiaoge Song Wenhai Wang Ding Liang Chunhua Shen Ping Luo ISeg 127 547 0 29 Sep 2019
A Weakly Supervised Method for Instance Segmentation of Biological Cells F. Guerrero-Peña Pedro Diamel Marrero Fernández Ing Ren Tsang Alexandre Cunha 49 15 0 26 Aug 2019
Star-convex Polyhedra for 3D Object Detection and Segmentation in Microscopy Martin Weigert Uwe Schmidt Robert Haase Ko Sugawara E. Myers 90 369 0 09 Aug 2019
Multi-scale Cell Instance Segmentation with Keypoint Graph based Bounding Boxes Jingru Yi Pengxiang Wu Qiaoying Huang Hui Qu Bo Liu Daniel J. Hoeppner Dimitris N. Metaxas ISeg 73 50 0 22 Jul 2019
GASP, a generalized framework for agglomerative clustering of signed graphs and its application to Instance Segmentation Alberto Bailoni Constantin Pape Nathan Hütsch Steffen Wolf T. Beier Anna Kreshuk Fred Hamprecht 65 12 0 27 Jun 2019