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Data Efficient and Weakly Supervised Computational Pathology on Whole
  Slide Images
v1v2 (latest)

Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images

Nature Biomedical Engineering (Nat Biomed Eng), 2020
20 April 2020
Ming Y. Lu
Drew F. K. Williamson
Tiffany Y. Chen
Richard J. Chen
Matteo Barbieri
Faisal Mahmood
ArXiv (abs)PDFHTML

Papers citing "Data Efficient and Weakly Supervised Computational Pathology on Whole Slide Images"

50 / 517 papers shown
Prostate biopsy whole slide image dataset from an underrepresented Middle Eastern population
Prostate biopsy whole slide image dataset from an underrepresented Middle Eastern population
Peshawa J. Muhammad Ali
Navin Vincent
Saman S. Abdulla
Han N. Mohammed Fadhl
A. Blilie
...
Julia Anna Mielcarz
X. Ji
K. Kartasalo
Abdulbasit K. Al-Talabani
N. Mulliqi
261
1
0
03 Dec 2025
Cross-Domain Validation of a Resection-Trained Self-Supervised Model on Multicentre Mesothelioma Biopsies
Cross-Domain Validation of a Resection-Trained Self-Supervised Model on Multicentre Mesothelioma Biopsies
Farzaneh Seyedshahi
Francesca Damiola
Sylvie Lantuejoul
Ke-Fei Yuan
J. L. Quesne
78
0
0
01 Dec 2025
Structural Prognostic Event Modeling for Multimodal Cancer Survival Analysis
Structural Prognostic Event Modeling for Multimodal Cancer Survival Analysis
Yilan Zhang
Li Nanbo
Changchun Yang
Jürgen Schmidhuber
Xin Gao
115
0
0
30 Nov 2025
Pathryoshka: Compressing Pathology Foundation Models via Multi-Teacher Knowledge Distillation with Nested Embeddings
Pathryoshka: Compressing Pathology Foundation Models via Multi-Teacher Knowledge Distillation with Nested Embeddings
Christian Grashei
Christian Brechenmacher
Rao Muhammad Umer
Jingsong Liu
Carsten Marr
Ewa Szczurek
Peter Schuffler
110
0
0
28 Nov 2025
Interpretable Multimodal Cancer Prototyping with Whole Slide Images and Incompletely Paired Genomics
Interpretable Multimodal Cancer Prototyping with Whole Slide Images and Incompletely Paired Genomics
Yupei Zhang
Yating Huang
Wanming Hu
Lequan Yu
Hujun Yin
Chao Li
137
0
0
26 Nov 2025
Navigating Gigapixel Pathology Images with Large Multimodal Models
Navigating Gigapixel Pathology Images with Large Multimodal Models
Thomas A. Buckley
Kian R. Weihrauch
Katherine Latham
Andrew Z. Zhou
Padmini A. Manrai
Arjun K. Manrai
LM&MA
242
2
0
24 Nov 2025
Zero-shot segmentation of skin tumors in whole-slide images with vision-language foundation models
Zero-shot segmentation of skin tumors in whole-slide images with vision-language foundation models
Santiago Moreno
Pablo Meseguer
Rocío del Amor
Valery Naranjo
VLM
174
0
0
24 Nov 2025
Together, Then Apart: Revisiting Multimodal Survival Analysis via a Min-Max Perspective
Together, Then Apart: Revisiting Multimodal Survival Analysis via a Min-Max Perspective
Wenjing Liu
Qin Ren
Wen Zhang
Yuewei Lin
Chenyu You
116
1
0
22 Nov 2025
PathAgent: Toward Interpretable Analysis of Whole-slide Pathology Images via Large Language Model-based Agentic Reasoning
PathAgent: Toward Interpretable Analysis of Whole-slide Pathology Images via Large Language Model-based Agentic Reasoning
Jingyun Chen
Linghan Cai
Zhikang Wang
Yi Huang
Songhan Jiang
Shenjin Huang
Hongpeng Wang
Yongbing Zhang
LLMAGLM&RoLM&MALRM
514
5
0
21 Nov 2025
SurvAgent: Hierarchical CoT-Enhanced Case Banking and Dichotomy-Based Multi-Agent System for Multimodal Survival Prediction
SurvAgent: Hierarchical CoT-Enhanced Case Banking and Dichotomy-Based Multi-Agent System for Multimodal Survival Prediction
Guolin Huang
Wenting Chen
Jiaqi Yang
Xinheng Lyu
Xiaoling Luo
Sen Yang
Xiaohan Xing
Linlin Shen
149
3
0
20 Nov 2025
nnMIL: A generalizable multiple instance learning framework for computational pathology
nnMIL: A generalizable multiple instance learning framework for computational pathology
Xiangde Luo
Jinxi Xiang
Yuanfeng Ji
Ruijiang Li
LM&MA
302
0
0
18 Nov 2025
MergeSlide: Continual Model Merging and Task-to-Class Prompt-Aligned Inference for Lifelong Learning on Whole Slide Images
MergeSlide: Continual Model Merging and Task-to-Class Prompt-Aligned Inference for Lifelong Learning on Whole Slide Images
Doanh C. Bui
Ba-Hung Ngo
H. Pham
Khang Phuoc-Quy Nguyen
Maï K. Nguyen
Y. Nakashima
CLLMoMeVLM
367
0
0
17 Nov 2025
Adaptive Diagnostic Reasoning Framework for Pathology with Multimodal Large Language Models
Adaptive Diagnostic Reasoning Framework for Pathology with Multimodal Large Language Models
Yunqi Hong
Johnson Kao
Liam Edwards
Nein-Tzu Liu
Chung-Yen Huang
Alex Oliveira-Kowaleski
Cho-Jui Hsieh
Neil Y. C. Lin
LRM
304
0
0
15 Nov 2025
Libra-MIL: Multimodal Prototypes Stereoscopic Infused with Task-specific Language Priors for Few-shot Whole Slide Image Classification
Libra-MIL: Multimodal Prototypes Stereoscopic Infused with Task-specific Language Priors for Few-shot Whole Slide Image ClassificationComputer Vision and Pattern Recognition (CVPR), 2025
Zhenfeng Zhuang
Fangyu Zhou
Liansheng Wang
111
1
0
11 Nov 2025
Contrastive Integrated Gradients: A Feature Attribution-Based Method for Explaining Whole Slide Image Classification
Contrastive Integrated Gradients: A Feature Attribution-Based Method for Explaining Whole Slide Image Classification
Anh Mai Vu
Tuan L. Vo
Ngoc Lam Quang Bui
Nam Nguyen Le Binh
Akash Awasthi
H. Q. Vo
T. Nguyen
Zhu Han
Chandra Mohan
Hien V. Nguyen
487
2
0
11 Nov 2025
EvoPS: Evolutionary Patch Selection for Whole Slide Image Analysis in Computational Pathology
EvoPS: Evolutionary Patch Selection for Whole Slide Image Analysis in Computational Pathology
Saya Hashemian
Azam Asilian Bidgoli
136
0
0
10 Nov 2025
Learning from the Right Patches: A Two-Stage Wavelet-Driven Masked Autoencoder for Histopathology Representation Learning
Learning from the Right Patches: A Two-Stage Wavelet-Driven Masked Autoencoder for Histopathology Representation Learning
Raneen Younis
Louay Hamdi
Lukas Chavez
Zahra Ahmadi
MedIm
253
0
0
10 Nov 2025
Diagnose Like A REAL Pathologist: An Uncertainty-Focused Approach for Trustworthy Multi-Resolution Multiple Instance Learning
Diagnose Like A REAL Pathologist: An Uncertainty-Focused Approach for Trustworthy Multi-Resolution Multiple Instance Learning
Sungrae Hong
Sol Lee
Jisu Shin
Mun Yi
Mun Yong Yi
327
0
0
09 Nov 2025
Spatially-Aware Mixture of Experts with Log-Logistic Survival Modeling for Whole-Slide Images
Spatially-Aware Mixture of Experts with Log-Logistic Survival Modeling for Whole-Slide Images
Ardhendu Sekhar
Vasu Soni
Keshav Aske
Shivam Madnoorkar
Pranav Jeevan
Amit Sethi
240
0
0
09 Nov 2025
Morpho-Genomic Deep Learning for Ovarian Cancer Subtype and Gene Mutation Prediction from Histopathology
Morpho-Genomic Deep Learning for Ovarian Cancer Subtype and Gene Mutation Prediction from Histopathology
Gabriela Fernandes
MedIm
96
0
0
05 Nov 2025
Positive Semi-definite Latent Factor Grouping-Boosted Cluster-reasoning Instance Disentangled Learning for WSI Representation
Positive Semi-definite Latent Factor Grouping-Boosted Cluster-reasoning Instance Disentangled Learning for WSI Representation
Chentao Li
Behzad Bozorgtabar
Yifang Ping
Pan Huang
Jing Qin
344
3
0
03 Nov 2025
Fusion of Multi-scale Heterogeneous Pathology Foundation Models for Whole Slide Image Analysis
Fusion of Multi-scale Heterogeneous Pathology Foundation Models for Whole Slide Image Analysis
Zhidong Yang
Xiuhui Shi
Wei Ba
Zhigang Song
Haijing Luan
Taiyuan Hu
Senlin Lin
Jiguang Wang
S. Kevin Zhou
Rui Yan
166
0
0
31 Oct 2025
Synthetic Data Reveals Generalization Gaps in Correlated Multiple Instance Learning
Synthetic Data Reveals Generalization Gaps in Correlated Multiple Instance Learning
Ethan Harvey
Dennis Johan Loevlie
Michael C. Hughes
MedIm
250
0
0
29 Oct 2025
ITC-RWKV: Interactive Tissue-Cell Modeling with Recurrent Key-Value Aggregation for Histopathological Subtyping
ITC-RWKV: Interactive Tissue-Cell Modeling with Recurrent Key-Value Aggregation for Histopathological Subtyping
Yating Huang
Qijun Yang
Lintao Xiang
Hujun Yin
145
1
0
24 Oct 2025
A Flow Model with Low-Rank Transformers for Incomplete Multimodal Survival Analysis
A Flow Model with Low-Rank Transformers for Incomplete Multimodal Survival Analysis
Yi Yin
Yuntao Shou
Zao Dai
Yun Peng
Tao Meng
Wei Ai
Keqin Li
OffRLMedIm
204
1
0
22 Oct 2025
Morphology-Aware Prognostic model for Five-Year Survival Prediction in Colorectal Cancer from H&E Whole Slide Images
Morphology-Aware Prognostic model for Five-Year Survival Prediction in Colorectal Cancer from H&E Whole Slide Images
Usama Sajjad
Abdul Rehman Akbar
Ziyu Su
Deborah Knight
Wendy L. Frankel
M. Gürcan
Wei Chen
M. Niazi
161
2
0
16 Oct 2025
Fourier Transform Multiple Instance Learning for Whole Slide Image Classification
Fourier Transform Multiple Instance Learning for Whole Slide Image ClassificationJournal of Medical Imaging (JMI), 2025
Anthony Bilic
Guangyu Sun
Ming Li
Md Sanzid Bin Hossain
Yu Tian
Wei Emma Zhang
Laura Brattain
Dexter Hadley
Chen Chen
259
1
0
16 Oct 2025
DistilCLIP-EEG: Enhancing Epileptic Seizure Detection Through Multi-modal Learning and Knowledge Distillation
DistilCLIP-EEG: Enhancing Epileptic Seizure Detection Through Multi-modal Learning and Knowledge DistillationIEEE journal of biomedical and health informatics (JBHI), 2025
Zexin Wang
Lin Shi
Haoyu Wu
Junru Luo
Xiangzeng Kong
Jun Qi
VLM
172
11
0
15 Oct 2025
ROFI: A Deep Learning-Based Ophthalmic Sign-Preserving and Reversible Patient Face Anonymizer
ROFI: A Deep Learning-Based Ophthalmic Sign-Preserving and Reversible Patient Face Anonymizer
Yuan Tian
Min Zhou
Yihao Chen
Fang Li
Lingzi Qi
...
Lin Li
Huifang Zhou
Xuefei Song
Guangtao Zhai
Xianqun Fan
130
5
0
13 Oct 2025
From Generic to Specialized: A Subspecialty Diagnostic System Powered by Self-Supervised Learning for Cervical Histopathology
From Generic to Specialized: A Subspecialty Diagnostic System Powered by Self-Supervised Learning for Cervical Histopathology
Yizhi Wang
Li Chen
Qiang Huang
Tian Guan
Xi Deng
...
Zhen Song
Xilong Zhao
Chao-Peng He
Ming Zhao
Yonghong He
134
0
0
11 Oct 2025
NEO: No-Optimization Test-Time Adaptation through Latent Re-Centering
NEO: No-Optimization Test-Time Adaptation through Latent Re-Centering
Alexander Murphy
Michal Danilowski
Soumyajit Chatterjee
Abhirup Ghosh
OODBDL
193
1
0
07 Oct 2025
MAPLE: Multi-scale Attribute-enhanced Prompt Learning for Few-shot Whole Slide Image Classification
MAPLE: Multi-scale Attribute-enhanced Prompt Learning for Few-shot Whole Slide Image Classification
Junjie Zhou
Wei Shao
Yagao Yue
Wei Mu
Peng Wan
Qi Zhu
Daoqiang Zhang
VLM
167
2
0
30 Sep 2025
DPsurv: Dual-Prototype Evidential Fusion for Uncertainty-Aware and Interpretable Whole-Slide Image Survival Prediction
DPsurv: Dual-Prototype Evidential Fusion for Uncertainty-Aware and Interpretable Whole-Slide Image Survival Prediction
Yucheng Xing
Ling Huang
Jingying Ma
Ruping Hong
Jiangdong Qiu
Pei Liu
Kai He
Huazhu Fu
Mengling Feng
202
2
0
28 Sep 2025
EfficientMIL: Efficient Linear-Complexity MIL Method for WSI Classification
EfficientMIL: Efficient Linear-Complexity MIL Method for WSI Classification
Chengying She
Chengwei Chen
Dongjie Fan
Lizhuang Liu
Jialu Zhang
Yun Bian
Ben Wang
Xinran Zhang
189
2
0
28 Sep 2025
Streamline pathology foundation model by cross-magnification distillation
Streamline pathology foundation model by cross-magnification distillation
Ziyu Su
Abdul Rehman Akbar
Usama Sajjad
Anil V. Parwani
M. Niazi
MedIm
112
0
0
27 Sep 2025
Revisiting Data Challenges of Computational Pathology: A Pack-based Multiple Instance Learning Training Framework
Revisiting Data Challenges of Computational Pathology: A Pack-based Multiple Instance Learning Training Framework
Wenhao Tang
Heng Fang
Ge Wu
Xiang Li
Ming-Ming Cheng
253
0
0
25 Sep 2025
PS3: A Multimodal Transformer Integrating Pathology Reports with Histology Images and Biological Pathways for Cancer Survival Prediction
PS3: A Multimodal Transformer Integrating Pathology Reports with Histology Images and Biological Pathways for Cancer Survival Prediction
M. Raza
A. Azam
Talha Qaiser
Nasir M. Rajpoot
179
3
0
24 Sep 2025
ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysis
ME-Mamba: Multi-Expert Mamba with Efficient Knowledge Capture and Fusion for Multimodal Survival Analysis
Chengsheng Zhang
Linhao Qu
Xiaoyu Liu
Zhijian Song
Mamba
183
1
0
21 Sep 2025
PROFUSEme: PROstate Cancer Biochemical Recurrence Prediction via FUSEd Multi-modal Embeddings
PROFUSEme: PROstate Cancer Biochemical Recurrence Prediction via FUSEd Multi-modal Embeddings
Suhang You
Carla Pitarch-Abaigar
Sanket Kachole
Sumedh Sonawane
Juhyung Ha
Anish Sudarshan Gada
David Crandall
Rakesh Shiradkar
Spyridon Bakas
137
0
0
17 Sep 2025
DinoAtten3D: Slice-Level Attention Aggregation of DinoV2 for 3D Brain MRI Anomaly Classification
DinoAtten3D: Slice-Level Attention Aggregation of DinoV2 for 3D Brain MRI Anomaly Classification
Fazle Rafsani
Jay Shah
C. Chong
T. Schwedt
Teresa Wu
167
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Multiple Instance Learning Framework with Masked Hard Instance Mining for Gigapixel Histopathology Image Analysis
Multiple Instance Learning Framework with Masked Hard Instance Mining for Gigapixel Histopathology Image Analysis
Wenhao Tang
Sheng Huang
Heng Fang
F. Zhou
Bo Liu
Qingshan Liu
222
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Cluster-Level Sparse Multi-Instance Learning for Whole-Slide Images
Cluster-Level Sparse Multi-Instance Learning for Whole-Slide Images
Yuedi Zhang
Zhixiang Xia
Guosheng Yin
Bin Liu
208
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torchmil: A PyTorch-based library for deep Multiple Instance Learning
torchmil: A PyTorch-based library for deep Multiple Instance Learning
Francisco M. Castro-Macías
Francisco J. Sáez-Maldonado
Pablo Morales-Álvarez
Rafael Molina
242
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09 Sep 2025
MedicalPatchNet: A Patch-Based Self-Explainable AI Architecture for Chest X-ray Classification
MedicalPatchNet: A Patch-Based Self-Explainable AI Architecture for Chest X-ray Classification
Patrick Wienholt
Christiane Kuhl
Jakob Nikolas Kather
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Daniel Truhn
138
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Does DINOv3 Set a New Medical Vision Standard? Benchmarking 2D and 3D Classification, Segmentation, and Registration
Does DINOv3 Set a New Medical Vision Standard? Benchmarking 2D and 3D Classification, Segmentation, and Registration
Che Liu
Yinda Chen
Haoyuan Shi
Jinpeng Lu
Bailiang Jian
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Christian Wachinger
James S. Duncan
Daniel Rueckert
Wenjia Bai
Rossella Arcucci
MedIm
298
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SAC-MIL: Spatial-Aware Correlated Multiple Instance Learning for Histopathology Whole Slide Image Classification
SAC-MIL: Spatial-Aware Correlated Multiple Instance Learning for Histopathology Whole Slide Image Classification
Yu Bai
Zitong Yu
Haowen Tian
X. Wang
Shuo Yan
...
Zheng Zhang
Wufan Wang
Hui Gao
Xiangyang Gong
Wendong Wang
145
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04 Sep 2025
Scalable and Loosely-Coupled Multimodal Deep Learning for Breast Cancer Subtyping
Scalable and Loosely-Coupled Multimodal Deep Learning for Breast Cancer Subtyping
Mohammed Amer
Mohamed Suliman
Tu Bui
Nuria Garcia
Serban Georgescu
145
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Efficient Pyramidal Analysis of Gigapixel Images on a Decentralized Modest Computer Cluster
Efficient Pyramidal Analysis of Gigapixel Images on a Decentralized Modest Computer ClusterEuropean Conference on Parallel Processing (Euro-Par), 2025
Marie Reinbigler
Rishi Sharma
Rafael Pires
Elisabeth Brunet
Anne-Marie Kermarrec
Catalin Fetita
117
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SemaMIL: Semantic-Aware Multiple Instance Learning with Retrieval-Guided State Space Modeling for Whole Slide Images
SemaMIL: Semantic-Aware Multiple Instance Learning with Retrieval-Guided State Space Modeling for Whole Slide Images
Lubin Gan
Xiaoman Wu
Jing Zhang
Zhifeng Wang
Linhao Qu
Siying Wu
Xiaoyan Sun
219
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30 Aug 2025
From slides to AI-ready maps: Standardized multi-layer tissue maps as metadata for artificial intelligence in digital pathology
From slides to AI-ready maps: Standardized multi-layer tissue maps as metadata for artificial intelligence in digital pathology
Gernot Fiala
M. Plass
Robert Harb
P. Regitnig
Kristijan Skok
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Roman Stoklasa
Rudolf Nenutil
N. Zerbe
Andreas Holzinger
Petr Holub
186
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