UmlsBERT: Clinical Domain Knowledge Augmentation of Contextual Embeddings Using the Unified Medical Language System Metathesaurus

20 October 2020

Alexander Wong

Papers citing "UmlsBERT: Clinical Domain Knowledge Augmentation of Contextual Embeddings Using the Unified Medical Language System Metathesaurus"

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Title
Leveraging Semantic Type Dependencies for Clinical Named Entity Recognition Linh Le Guido Zuccon Gianluca Demartini Genghong Zhao Xia Zhang 50 1 0 07 Mar 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics Kai He Rui Mao Qika Lin Yucheng Ruan Xiang Lan Mengling Feng Erik Cambria LM&MA AILaw 93 153 0 28 Jan 2025
"I Wish There Were an AI": Challenges and AI Potential in Cancer Patient-Provider Communication Ziqi Yang Xuhai Xu Bingsheng Yao Jiachen Li Jennifer Bagdasarian G. Gao Dakuo Wang 27 3 0 20 Apr 2024
Knowledge-tuning Large Language Models with Structured Medical Knowledge Bases for Reliable Response Generation in Chinese Hao Wang Sendong Zhao Zewen Qiang Zijian Li Nuwa Xi ... Haoqiang Guo Yuhan Chen Haoming Xu Bing Qin Ting Liu LM&MA AI4MH 24 17 0 08 Sep 2023
UMLS-KGI-BERT: Data-Centric Knowledge Integration in Transformers for Biomedical Entity Recognition Aidan Mannion Thierry Chevalier D. Schwab Lorraine Goeuriot MedIm 51 3 0 20 Jul 2023
Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain Aryo Pradipta Gema Pasquale Minervini Luke Daines Tom Hope Beatrice Alex LM&MA ALM 32 40 0 06 Jul 2023
Applying unsupervised keyphrase methods on concepts extracted from discharge sheets Hoda Memarzadeh Nasser Ghadiri Matthias Samwald Maryam Lotfi Shahreza 36 0 0 15 Mar 2023
Generating multiple-choice questions for medical question answering with distractors and cue-masking Damien Sileo Kanimozhi Uma Marie-Francine Moens 35 5 0 13 Mar 2023
A Comparative Study of Pretrained Language Models for Long Clinical Text Yikuan Li R. M. Wehbe F. Ahmad Hanyin Wang Yuan Luo LM&MA ELM VLM MedIm 24 79 0 27 Jan 2023
MedJEx: A Medical Jargon Extraction Model with Wiki's Hyperlink Span and Contextualized Masked Language Model Score Sunjae Kwon Zonghai Yao H. Jordan David Levy Brian Corner Hong-ye Yu 19 18 0 12 Oct 2022
Prompt Combines Paraphrase: Teaching Pre-trained Models to Understand Rare Biomedical Words Hao Wang Chi-Liang Liu Nuwa Xi Sendong Zhao Meizhi Ju Shiwei Zhang Ziheng Zhang Yefeng Zheng Bing Qin Ting Liu VLM AAML LM&MA 41 6 0 14 Sep 2022
Review of Natural Language Processing in Pharmacology D. Trajanov Vangel Trajkovski Makedonka Dimitrieva Jovana Dobreva Milos Jovanovik Matej Klemen Alevs vZagar Marko Robnik-vSikonja LM&MA 23 7 0 22 Aug 2022
Decorate the Examples: A Simple Method of Prompt Design for Biomedical Relation Extraction Hui-Syuan Yeh Thomas Lavergne Pierre Zweigenbaum 21 10 0 21 Apr 2022
EHRKit: A Python Natural Language Processing Toolkit for Electronic Health Record Texts Irene Z Li Keen You Yujie Qiao Lucas Huang Chia-Chun Hsieh Benjamin Rosand Xiangru Tang Dragomir R. Radev 38 4 0 13 Apr 2022
Literature-Augmented Clinical Outcome Prediction Aakanksha Naik Sravanthi Parasa Sergey Feldman Lucy Lu Wang Tom Hope LM&MA 18 25 0 16 Nov 2021
Coreference Resolution for the Biomedical Domain: A Survey Pengcheng Lu Massimo Poesio 15 15 0 25 Sep 2021
Probing Pre-Trained Language Models for Disease Knowledge Israa Alghanmi Luis Espinosa-Anke Steven Schockaert LM&MA ELM 16 13 0 14 Jun 2021
AMMU : A Survey of Transformer-based Biomedical Pretrained Language Models Katikapalli Subramanyam Kalyan A. Rajasekharan S. Sangeetha LM&MA MedIm 20 164 0 16 Apr 2021
Extracting Lifestyle Factors for Alzheimer's Disease from Clinical Notes Using Deep Learning with Weak Supervision Zitao Shen Yoonkwon Yi A. Bompelli Fang Yu Yanshan Wang Rui Zhang 14 11 0 22 Jan 2021
Google's Neural Machine Translation System: Bridging the Gap between Human and Machine Translation Yonghui Wu M. Schuster Z. Chen Quoc V. Le Mohammad Norouzi ... Alex Rudnick Oriol Vinyals G. Corrado Macduff Hughes J. Dean AIMat 716 6,743 0 26 Sep 2016