Communities
Connect sessions
AI calendar
Organizations
Join Slack
Contact Sales
Search
Open menu
Home
Papers
2106.03598
Cited By
SciFive: a text-to-text transformer model for biomedical literature
28 May 2021
Long Phan
J. Anibal
H. Tran
Shaurya Chanana
Erol Bahadroglu
Alec Peltekian
G. Altan-Bonnet
MedIm
Re-assign community
ArXiv (abs)
PDF
HTML
Github
Papers citing
"SciFive: a text-to-text transformer model for biomedical literature"
50 / 86 papers shown
BiCA: Effective Biomedical Dense Retrieval with Citation-Aware Hard Negatives
Aarush Sinha
Pavan Kumar S
Roshan Balaji
Nirav Pravinbhai Bhatt
212
4
0
11 Nov 2025
HySim-LLM: Embedding-Weighted Fine-Tuning Bounds and Manifold Denoising for Domain-Adapted LLMs
Majid Jaberi-Douraki
Hossein Sholehrasa
Xuan Xu
Remya Ampadi Ramachandran
113
3
0
09 Oct 2025
Biomedical Hypothesis Explainability with Graph-Based Context Retrieval
bioRxiv (bioRxiv), 2025
Ilya Tyagin
Saeideh Valipour
Aliaksandra Sikirzhytskaya
M. Shtutman
Ilya Safro
152
0
0
15 Sep 2025
Subjective Behaviors and Preferences in LLM: Language of Browsing
Sai Sundaresan
Harshita Chopra
Atanu R. Sinha
Koustava Goswami
Nagasai Saketh Naidu
Raghav Karan
N Anushka
324
0
0
21 Aug 2025
OpenMed NER: Open-Source, Domain-Adapted State-of-the-Art Transformers for Biomedical NER Across 12 Public Datasets
Maziyar Panahi
MedIm
VLM
AI4CE
173
1
0
03 Aug 2025
Error-Aware Curriculum Learning for Biomedical Relation Classification
Sinchani Chakraborty
S. Sarkar
Pawan Goyal
217
0
0
18 Jul 2025
MedCite: Can Language Models Generate Verifiable Text for Medicine?
Annual Meeting of the Association for Computational Linguistics (ACL), 2025
Xiao Wang
Mengjue Tan
Qiao Jin
Guangzhi Xiong
Yu Hu
Aidong Zhang
Zhiyong Lu
Minjia Zhang
291
9
0
07 Jun 2025
Structuring Radiology Reports: Challenging LLMs with Lightweight Models
Johannes Moll
Louisa Fay
Asfandyar Azhar
Sophie Ostmeier
Tim Lueth
S. Gatidis
Curtis P. Langlotz
Jean-Benoit Delbrouck
326
2
0
30 May 2025
Scaling Up Biomedical Vision-Language Models: Fine-Tuning, Instruction Tuning, and Multi-Modal Learning
Cheng Peng
Kai Zhang
Mengxian Lyu
Hongfang Liu
Lichao Sun
Yonghui Wu
LM&MA
MedIm
VLM
590
8
0
23 May 2025
Investigating Task Arithmetic for Zero-Shot Information Retrieval
Annual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR), 2025
Marco Braga
Pranav Kasela
Alessandro Raganato
G. Pasi
RALM
495
4
0
01 May 2025
Enhancing Health Information Retrieval with RAG by Prioritizing Topical Relevance and Factual Accuracy
Rishabh Uapadhyay
Marco Viviani
472
19
0
07 Feb 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics
Information Fusion (Inf. Fusion), 2023
Kai He
Rui Mao
Qika Lin
Yucheng Ruan
Xiang Lan
Mengling Feng
Xiaoshi Zhong
LM&MA
AILaw
903
302
0
28 Jan 2025
Integrating LLMs with ITS: Recent Advances, Potentials, Challenges, and Future Directions
Doaa Mahmud
Hadeel Hajmohamed
Shamma Almentheri
Shamma Alqaydi
Lameya Aldhaheri
R. A. Khalil
Nasir Saeed
AI4TS
295
60
0
08 Jan 2025
Clinical Insights: A Comprehensive Review of Language Models in Medicine
PLOS Digital Health (PDH), 2024
Nikita Neveditsin
Pawan Lingras
V. Mago
LM&MA
669
24
0
08 Jan 2025
MedINST: Meta Dataset of Biomedical Instructions
Conference on Empirical Methods in Natural Language Processing (EMNLP), 2024
Wenhan Han
Meng Fang
Zihan Zhang
Yu Yin
Zirui Song
Ling-Hao Chen
Mykola Pechenizkiy
Qingyu Chen
LM&MA
285
5
0
17 Oct 2024
GP-GPT: Large Language Model for Gene-Phenotype Mapping
Yanjun Lyu
Zihao Wu
Lu Zhang
Jing Zhang
Yiwei Li
...
Chao Huang
W. Li
Yan Zhuang
Dajiang Zhu
Dajiang Zhu
LM&MA
495
15
0
15 Sep 2024
Synthetic4Health: Generating Annotated Synthetic Clinical Letters
Frontiers in Digital Health (Front. Digit. Health), 2024
Libo Ren
Samuel Belkadi
Lifeng Han
Warren Del-Pinto
Goran Nenadic
SyDa
230
6
0
14 Sep 2024
GPT-3 Powered Information Extraction for Building Robust Knowledge Bases
Ritabrata Roy Choudhury
Soumik Dey
235
1
0
31 Jul 2024
Rapid Biomedical Research Classification: The Pandemic PACT Advanced Categorisation Engine
Omid Rohanian
Mohammadmahdi Nouriborji
Olena Seminog
Rodrigo Furst
Thomas Mendy
...
Georgina Humphreys
E. Antonio
Adrian Bucher
Alice Norton
David Clifton
407
2
0
14 Jul 2024
Boosting Biomedical Concept Extraction by Rule-Based Data Augmentation
Qiwei Shao
Fengran Mo
Jian-Yun Nie
MedIm
287
0
0
03 Jul 2024
Shimo Lab at "Discharge Me!": Discharge Summarization by Prompt-Driven Concatenation of Electronic Health Record Sections
Yunzhen He
Hiroaki Yamagiwa
Hidetoshi Shimodaira
332
4
0
26 Jun 2024
A Comprehensive Survey of Scientific Large Language Models and Their Applications in Scientific Discovery
Yu Zhang
Xiusi Chen
Sara Szymkuć
Sheng Wang
Shuiwang Ji
Wei Wang
Jiawei Han
495
106
0
16 Jun 2024
Exploration of Masked and Causal Language Modelling for Text Generation
Nicolo Micheletti
Samuel Belkadi
Lifeng Han
Goran Nenadic
316
12
0
21 May 2024
Open Challenges and Opportunities in Federated Foundation Models Towards Biomedical Healthcare
Xingyu Li
Lu Peng
Yuping Wang
Weihua Zhang
AI4CE
MedIm
LM&MA
387
46
0
10 May 2024
Unveiling LLM Evaluation Focused on Metrics: Challenges and Solutions
Taojun Hu
Xiao-Hua Zhou
ELM
369
50
0
14 Apr 2024
Medical mT5: An Open-Source Multilingual Text-to-Text LLM for The Medical Domain
Iker García-Ferrero
Rodrigo Agerri
Aitziber Atutxa Salazar
Elena Cabrio
Iker de la Iglesia
...
Johana Ramirez-Romero
German Rigau
J. M. Villa-Gonzalez
S. Villata
Andrea Zaninello
332
16
0
11 Apr 2024
MedExpQA: Multilingual Benchmarking of Large Language Models for Medical Question Answering
Inigo Alonso
Maite Oronoz
Rodrigo Agerri
AI4MH
LM&MA
ELM
279
71
1
08 Apr 2024
AI for Biomedicine in the Era of Large Language Models
Zhenyu Bi
Sajib Acharjee Dip
Daniel Hajialigol
Sindhura Kommu
Hanwen Liu
Meng Lu
Xuan Wang
LM&MA
AI4CE
226
11
0
23 Mar 2024
Leveraging Biomolecule and Natural Language through Multi-Modal Learning: A Survey
Qizhi Pei
Lijun Wu
Ran Bi
Jinhua Zhu
Yue Wang
Guoqing Liu
Tao Qin
Lijun Wu
Rui Yan
AI4CE
544
25
0
03 Mar 2024
Large Language Multimodal Models for 5-Year Chronic Disease Cohort Prediction Using EHR Data
Jun-En Ding
Phan Nguyen Minh Thao
Wen-Chih Peng
Jian-Zhe Wang
Chun-Cheng Chug
...
Dongsheng Luo
Chi-Te Wang
Pei-fu Chen
Feng Liu
Fang-Ming Hung
LM&MA
222
6
0
02 Mar 2024
How Important is Domain Specificity in Language Models and Instruction Finetuning for Biomedical Relation Extraction?
Aviv Brokman
Ramakanth Kavuluru
LM&MA
ALM
308
3
0
21 Feb 2024
Me LLaMA: Foundation Large Language Models for Medical Applications
Qianqian Xie
Qingyu Chen
Aokun Chen
C.A.I. Peng
Yan Hu
...
Huan He
Lucila Ohno-Machido
Yonghui Wu
Hua Xu
Jiang Bian
LM&MA
AI4MH
493
37
0
20 Feb 2024
Named Entity Recognition Under Domain Shift via Metric Learning for Life Sciences
Hongyi Liu
Qingyun Wang
Payam Karisani
Heng Ji
317
5
0
19 Jan 2024
UniDCP: Unifying Multiple Medical Vision-language Tasks via Dynamic Cross-modal Learnable Prompts
Chenlu Zhan
Yufei Zhang
Yu Lin
Gaoang Wang
Hongwei Wang
VLM
MedIm
301
15
0
18 Dec 2023
Explanatory Argument Extraction of Correct Answers in Resident Medical Exams
Iakes Goenaga
Aitziber Atutxa
Koldo Gojenola
Maite Oronoz
Rodrigo Agerri
ELM
256
12
0
01 Dec 2023
Ascle: A Python Natural Language Processing Toolkit for Medical Text Generation
Rui Yang
Qingcheng Zeng
Keen You
Yujie Qiao
Lucas Huang
...
Dragomir R. Radev
Zhiyong Lu
Hua Xu
Qingyu Chen
Irene Li
ELM
LM&MA
290
3
0
28 Nov 2023
nach0: Multimodal Natural and Chemical Languages Foundation Model
Chemical Science (Chem. Sci.), 2023
M. Livne
Z. Miftahutdinov
E. Tutubalina
Maksim Kuznetsov
Daniil Polykovskiy
...
Aastha Jhunjhunwala
Anthony Costa
Alex Aliper
Alán Aspuru-Guzik
Alex Zhavoronkov
AI4CE
449
41
0
21 Nov 2023
LongBoX: Evaluating Transformers on Long-Sequence Clinical Tasks
Mihir Parmar
Aakanksha Naik
Himanshu Gupta
Disha Agrawal
Chitta Baral
LM&MA
248
3
0
16 Nov 2023
A Survey of Large Language Models in Medicine: Progress, Application, and Challenge
Hongjian Zhou
Fenglin Liu
Boyang Gu
Xinyu Zou
Jinfa Huang
...
Yefeng Zheng
Lei A. Clifton
Zheng Li
Fenglin Liu
David Clifton
LM&MA
824
212
0
09 Nov 2023
NERetrieve: Dataset for Next Generation Named Entity Recognition and Retrieval
Conference on Empirical Methods in Natural Language Processing (EMNLP), 2023
Uri Katz
Matan Vetzler
Amir D. N. Cohen
Yoav Goldberg
320
16
0
22 Oct 2023
Towards Mitigating Hallucination in Large Language Models via Self-Reflection
Ziwei Ji
Tiezheng Yu
Yan Xu
Nayeon Lee
Etsuko Ishii
Pascale Fung
HILM
279
110
0
10 Oct 2023
Self-Specialization: Uncovering Latent Expertise within Large Language Models
Annual Meeting of the Association for Computational Linguistics (ACL), 2023
Junmo Kang
Hongyin Luo
Yada Zhu
Jacob A. Hansen
James R. Glass
David D. Cox
Alan Ritter
Rogerio Feris
Leonid Karlinsky
ALM
MoMe
336
7
0
29 Sep 2023
Investigating Large Language Models and Control Mechanisms to Improve Text Readability of Biomedical Abstracts
IEEE International Conference on Healthcare Informatics (ICHI), 2023
Z. Li
Samuel Belkadi
Nicolo Micheletti
Lifeng Han
Matthew Shardlow
Goran Nenadic
289
13
0
22 Sep 2023
Matching Patients to Clinical Trials with Large Language Models
Nature Communications (Nat. Commun.), 2023
Qiao Jin
Zifeng Wang
C. Floudas
Fangyuan Chen
Changlin Gong
Dara Bracken-Clarke
Elisabetta Xue
Yifan Yang
Jimeng Sun
Zhiyong Lu
LM&MA
590
218
0
27 Jul 2023
Building blocks for complex tasks: Robust generative event extraction for radiology reports under domain shifts
Clinical Natural Language Processing Workshop (ClinicalNLP), 2023
Sitong Zhou
Meliha Yetisgen
Mari Ostendorf
MedIm
271
2
0
15 Jun 2023
Prompt-based Extraction of Social Determinants of Health Using Few-shot Learning
Clinical Natural Language Processing Workshop (ClinicalNLP), 2023
Giridhar Kaushik Ramachandran
Yujuan Fu
Bin Han
K. Lybarger
Nicholas J. Dobbins
Özlem Uzuner
Meliha Yetisgen
FedML
219
20
0
12 Jun 2023
Extensive Evaluation of Transformer-based Architectures for Adverse Drug Events Extraction
Knowledge-Based Systems (KBS), 2023
Simone Scaboro
Beatrice Portelli
Emmanuele Chersoni
Enrico Santus
Giuseppe Serra
258
21
0
08 Jun 2023
Multi-Task Training with In-Domain Language Models for Diagnostic Reasoning
Clinical Natural Language Processing Workshop (ClinicalNLP), 2023
Brihat Sharma
Yanjun Gao
Timothy A. Miller
M. Churpek
Majid Afshar
Dmitriy Dligach
ELM
LRM
321
13
0
07 Jun 2023
THiFLY Research at SemEval-2023 Task 7: A Multi-granularity System for CTR-based Textual Entailment and Evidence Retrieval
International Workshop on Semantic Evaluation (SemEval), 2023
Yuxuan Zhou
Ziyun Jin
Meiwei Li
Chenyi Guo
Xien Liu
Xinxin You
Ji Wu
176
12
0
02 Jun 2023
BiomedGPT: A Unified and Generalist Biomedical Generative Pre-trained Transformer for Vision, Language, and Multimodal Tasks
Nature Network Boston (NNB), 2023
Kai Zhang
Jun Yu
Eashan Adhikarla
Rong Zhou
Zhilin Yan
...
Hang Zhang
Yong Chen
Shijie Zhao
Hongfang Liu
Lichao Sun
LM&MA
MedIm
360
11
0
26 May 2023
1
2
Next
Page 1 of 2
