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Cited By

LinkBERT: Pretraining Language Models with Document Links

LinkBERT: Pretraining Language Models with Document Links

Annual Meeting of the Association for Computational Linguistics (ACL), 2022

29 March 2022

Michihiro Yasunaga

Abigail Z. Jacobs

ArXiv (abs)PDF HTML Github (437★)

Papers citing "LinkBERT: Pretraining Language Models with Document Links"

50 / 178 papers shown

Label Deconvolution for Node Representation Learning on Large-scale Attributed Graphs against Learning Bias

Label Deconvolution for Node Representation Learning on Large-scale Attributed Graphs against Learning BiasIEEE Transactions on Pattern Analysis and Machine Intelligence (TPAMI), 2023

255

8

0

26 Sep 2023

TouchUp-G: Improving Feature Representation through Graph-Centric Finetuning

TouchUp-G: Improving Feature Representation through Graph-Centric FinetuningAnnual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR), 2023

Christos Faloutsos

528

20

0

25 Sep 2023

When Large Language Models Meet Citation: A Survey

When Large Language Models Meet Citation: A Survey

207

14

0

18 Sep 2023

Augmenting Black-box LLMs with Medical Textbooks for Biomedical Question Answering

Augmenting Black-box LLMs with Medical Textbooks for Biomedical Question AnsweringConference on Empirical Methods in Natural Language Processing (EMNLP), 2023

Yubo Wang

310

37

0

05 Sep 2023

Large language models in medicine: the potentials and pitfalls

Large language models in medicine: the potentials and pitfallsAnnals of Internal Medicine (Ann Intern Med), 2023

Shawheen J. Rezaei

Roxana Daneshjou

299

135

0

31 Aug 2023

MedAlign: A Clinician-Generated Dataset for Instruction Following with
Electronic Medical Records

MedAlign: A Clinician-Generated Dataset for Instruction Following with Electronic Medical RecordsAAAI Conference on Artificial Intelligence (AAAI), 2023

Scott L. Fleming

Alejandro Lozano

Jenelle A. Jindal

...

Jason Alan Fries

307

80

0

27 Aug 2023

BIOptimus: Pre-training an Optimal Biomedical Language Model with
Curriculum Learning for Named Entity Recognition

BIOptimus: Pre-training an Optimal Biomedical Language Model with Curriculum Learning for Named Entity RecognitionWorkshop on Biomedical Natural Language Processing (BioNLP), 2023

233

3

0

16 Aug 2023

Through the Lens of Core Competency: Survey on Evaluation of Large
Language Models

Through the Lens of Core Competency: Survey on Evaluation of Large Language ModelsChina National Conference on Chinese Computational Linguistics (CNCCL), 2023

197

23

0

15 Aug 2023

Med-Flamingo: a Multimodal Medical Few-shot Learner

Med-Flamingo: a Multimodal Medical Few-shot Learner

Michihiro Yasunaga

Yashodhara Dalmia

Pranav Rajpurkar

290

437

0

27 Jul 2023

Matching Patients to Clinical Trials with Large Language Models

Matching Patients to Clinical Trials with Large Language ModelsNature Communications (Nat. Commun.), 2023

Dara Bracken-Clarke

Jimeng Sun

420

189

0

27 Jul 2023

Text-guided Foundation Model Adaptation for Pathological Image
Classification

Text-guided Foundation Model Adaptation for Pathological Image ClassificationInternational Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI), 2023

Xiaosong Wang

Yu Qiao

165

62

0

27 Jul 2023

Exploring the Potential of Large Language Models (LLMs) in Learning on
Graphs

Exploring the Potential of Large Language Models (LLMs) in Learning on GraphsSIGKDD Explorations (SIGKDD Explor.), 2023

...

Shuaiqiang Wang

639

376

0

07 Jul 2023

DARE: Towards Robust Text Explanations in Biomedical and Healthcare
Applications

DARE: Towards Robust Text Explanations in Biomedical and Healthcare ApplicationsAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

221

1

0

05 Jul 2023

Biomedical Language Models are Robust to Sub-optimal Tokenization

Biomedical Language Models are Robust to Sub-optimal TokenizationWorkshop on Biomedical Natural Language Processing (BioNLP), 2023

Bernal Jiménez Gutiérrez

Huan Sun

186

9

0

30 Jun 2023

Weakly Supervised Multi-Label Classification of Full-Text Scientific
Papers

Weakly Supervised Multi-Label Classification of Full-Text Scientific PapersKnowledge Discovery and Data Mining (KDD), 2023

Yu Zhang

Xiusi Chen

132

18

0

24 Jun 2023

ARIES: A Corpus of Scientific Paper Edits Made in Response to Peer
Reviews

ARIES: A Corpus of Scientific Paper Edits Made in Response to Peer ReviewsAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

236

30

0

21 Jun 2023

SynerGPT: In-Context Learning for Personalized Drug Synergy Prediction
and Drug Design

SynerGPT: In-Context Learning for Personalized Drug Synergy Prediction and Drug DesignbioRxiv (bioRxiv), 2023

Martin D. Burke

Heng Ji

395

21

0

19 Jun 2023

Building a Corpus for Biomedical Relation Extraction of Species Mentions

Building a Corpus for Biomedical Relation Extraction of Species MentionsWorkshop on Biomedical Natural Language Processing (BioNLP), 2023

Oumaima El Khettari

Samuel Chaffron

79

4

0

14 Jun 2023

THiFLY Research at SemEval-2023 Task 7: A Multi-granularity System for
CTR-based Textual Entailment and Evidence Retrieval

THiFLY Research at SemEval-2023 Task 7: A Multi-granularity System for CTR-based Textual Entailment and Evidence RetrievalInternational Workshop on Semantic Evaluation (SemEval), 2023

Ji Wu

138

12

0

02 Jun 2023

Comparing and combining some popular NER approaches on Biomedical tasks

Comparing and combining some popular NER approaches on Biomedical tasksWorkshop on Biomedical Natural Language Processing (BioNLP), 2023

206

7

0

30 May 2023

Knowledge-Augmented Reasoning Distillation for Small Language Models in
Knowledge-Intensive Tasks

Knowledge-Augmented Reasoning Distillation for Small Language Models in Knowledge-Intensive TasksNeural Information Processing Systems (NeurIPS), 2023

Kenji Kawaguchi

297

97

0

28 May 2023

Peek Across: Improving Multi-Document Modeling via Cross-Document
Question-Answering

Peek Across: Improving Multi-Document Modeling via Cross-Document Question-AnsweringAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Matthew E. Peters

Jacob Goldberger

Arman Cohan

239

37

0

24 May 2023

Injecting Knowledge into Biomedical Pre-trained Models via Polymorphism
and Synonymous Substitution

Injecting Knowledge into Biomedical Pre-trained Models via Polymorphism and Synonymous Substitution

Hongbo Zhang

Xiang Wan

122

1

0

24 May 2023

Iteratively Improving Biomedical Entity Linking and Event Extraction via
Hard Expectation-Maximization

Iteratively Improving Biomedical Entity Linking and Event Extraction via Hard Expectation-Maximization

160

0

0

24 May 2023

From Characters to Words: Hierarchical Pre-trained Language Model for
Open-vocabulary Language Understanding

From Characters to Words: Hierarchical Pre-trained Language Model for Open-vocabulary Language UnderstandingAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Kayhan Batmanghelich

Changrong Zhang

184

7

0

23 May 2023

ConGraT: Self-Supervised Contrastive Pretraining for Joint Graph and
Text Embeddings

ConGraT: Self-Supervised Contrastive Pretraining for Joint Graph and Text EmbeddingsWorkshop on Graph-based Methods for Natural Language Processing (Graph4NLP), 2023

William Brannon

338

41

0

23 May 2023

Pre-training Multi-task Contrastive Learning Models for Scientific
Literature Understanding

Pre-training Multi-task Contrastive Learning Models for Scientific Literature UnderstandingConference on Empirical Methods in Natural Language Processing (EMNLP), 2023

Yu Zhang

Xiaodong Liu

247

19

0

23 May 2023

Automated Metrics for Medical Multi-Document Summarization Disagree with
Human Evaluations

Automated Metrics for Medical Multi-Document Summarization Disagree with Human EvaluationsAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Yulia Otmakhova

Thinh Hung Truong

Byron C. Wallace

336

30

0

23 May 2023

BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for
Real-World Pharmacovigilance

BioDEX: Large-Scale Biomedical Adverse Drug Event Extraction for Real-World PharmacovigilanceConference on Empirical Methods in Natural Language Processing (EMNLP), 2023

Karel DÓosterlinck

Thomas Demeester

Klim Zaporojets

Simon Ellershaw

Jack R. Collins

Christopher Potts

212

16

0

22 May 2023

Enhancing Small Medical Learners with Privacy-preserving Contextual
Prompting

Enhancing Small Medical Learners with Privacy-preserving Contextual PromptingInternational Conference on Learning Representations (ICLR), 2023

Linda R. Petzold

278

13

0

22 May 2023

Patton: Language Model Pretraining on Text-Rich Networks

Patton: Language Model Pretraining on Text-Rich NetworksAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Yu Zhang

206

61

0

20 May 2023

Bi-VLGM : Bi-Level Class-Severity-Aware Vision-Language Graph Matching
for Text Guided Medical Image Segmentation

Bi-VLGM : Bi-Level Class-Severity-Aware Vision-Language Graph Matching for Text Guided Medical Image Segmentation

221

11

0

20 May 2023

ESCOXLM-R: Multilingual Taxonomy-driven Pre-training for the Job Market
Domain

ESCOXLM-R: Multilingual Taxonomy-driven Pre-training for the Job Market DomainAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Rob van der Goot

151

26

0

20 May 2023

Question-Answering System Extracts Information on Injection Drug Use
from Clinical Notes

Question-Answering System Extracts Information on Injection Drug Use from Clinical NotesCommunications Medicine (Commun Med), 2023

Sudarshan Srinivasan

...

Gregory D. Peterson

156

4

0

15 May 2023

Unsupervised Dense Retrieval Training with Web Anchors

Unsupervised Dense Retrieval Training with Web AnchorsAnnual International ACM SIGIR Conference on Research and Development in Information Retrieval (SIGIR), 2023

147

5

0

10 May 2023

ANALOGICAL -- A Novel Benchmark for Long Text Analogy Evaluation in
Large Language Models

ANALOGICAL -- A Novel Benchmark for Long Text Analogy Evaluation in Large Language ModelsAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Thilini Wijesiriwardene

Ruwan Wickramarachchi

Shreeyash Mukul Gowaikar

Aishwarya N. Reganti

240

15

0

08 May 2023

KEPLET: Knowledge-Enhanced Pretrained Language Model with Topic Entity
Awareness

KEPLET: Knowledge-Enhanced Pretrained Language Model with Topic Entity AwarenessConference on Empirical Methods in Natural Language Processing (EMNLP), 2023

191

0

0

02 May 2023

Train Your Own GNN Teacher: Graph-Aware Distillation on Textual Graphs

Train Your Own GNN Teacher: Graph-Aware Distillation on Textual Graphs

Costas Mavromatis

Christos Faloutsos

George Karypis

262

39

0

20 Apr 2023

A Data-centric Framework for Improving Domain-specific Machine Reading
Comprehension Datasets

A Data-centric Framework for Improving Domain-specific Machine Reading Comprehension DatasetsFirst Workshop on Insights from Negative Results in NLP (Insights), 2023

Verena Suharman

297

4

0

02 Apr 2023

Natural language processing to automatically extract the presence and
severity of esophagitis in notes of patients undergoing radiotherapy

Natural language processing to automatically extract the presence and severity of esophagitis in notes of patients undergoing radiotherapyJCO Clinical Cancer Informatics (JCO CCI), 2023

Shan Chen

Hugo J. W. L. Aerts

Timothy A. Miller

Danielle S. Bitterman

99

17

0

24 Mar 2023

Large AI Models in Health Informatics: Applications, Challenges, and the
Future

Large AI Models in Health Informatics: Applications, Challenges, and the FutureIEEE journal of biomedical and health informatics (IEEE JBHI), 2023

...

Wu Yuan

284

185

0

21 Mar 2023

Generating multiple-choice questions for medical question answering with
distractors and cue-masking

Generating multiple-choice questions for medical question answering with distractors and cue-maskingInternational Conference on Language Resources and Evaluation (LREC), 2023

Marie-Francine Moens

208

5

0

13 Mar 2023

KILM: Knowledge Injection into Encoder-Decoder Language Models

KILM: Knowledge Injection into Encoder-Decoder Language ModelsAnnual Meeting of the Association for Computational Linguistics (ACL), 2023

Mahdi Namazifar

Devamanyu Hazarika

Aishwarya Padmakumar

Yang Liu

Dilek Z. Hakkani-Tür

174

33

0

17 Feb 2023

Entity-Aware Dual Co-Attention Network for Fake News Detection

Entity-Aware Dual Co-Attention Network for Fake News DetectionFindings (Findings), 2023

188

8

0

07 Feb 2023

Zero-shot causal learning

Zero-shot causal learningNeural Information Processing Systems (NeurIPS), 2023

Yusuf Roohani

Michihiro Yasunaga

316

18

0

28 Jan 2023

CLIP-Driven Universal Model for Organ Segmentation and Tumor Detection

CLIP-Driven Universal Model for Organ Segmentation and Tumor DetectionIEEE International Conference on Computer Vision (ICCV), 2023

Bennett A. Landman

Zongwei Zhou

577

297

0

02 Jan 2023

Large Language Models Encode Clinical Knowledge

Large Language Models Encode Clinical KnowledgeNature (Nature), 2022

Shekoofeh Azizi

...

Christopher Semturs

Alan Karthikesalingam

Vivek Natarajan

LM&MA ELM AI4MH

608

3,513

0

26 Dec 2022

Can NLI Provide Proper Indirect Supervision for Low-resource Biomedical
Relation Extraction?

Can NLI Provide Proper Indirect Supervision for Low-resource Biomedical Relation Extraction?Annual Meeting of the Association for Computational Linguistics (ACL), 2022

Mingyu Derek Ma

353

28

0

21 Dec 2022

Graph Learning and Its Advancements on Large Language Models: A Holistic
Survey

Graph Learning and Its Advancements on Large Language Models: A Holistic Survey

422

6

0

17 Dec 2022

From Cloze to Comprehension: Retrofitting Pre-trained Masked Language
Model to Pre-trained Machine Reader

From Cloze to Comprehension: Retrofitting Pre-trained Masked Language Model to Pre-trained Machine ReaderNeural Information Processing Systems (NeurIPS), 2022

Xin Li

273

3

0

09 Dec 2022

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