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2303.13642
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Random-effects substitution models for phylogenetics via scalable gradient approximations
23 March 2023
Andrew F. Magee
Andrew J Holbrook
J. Pekar
Itzue W. Caviedes-Solis
IV FredrickA.Matsen
G. Baele
J. Wertheim
Xiang Ji
P. Lemey
M. Suchard
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Papers citing
"Random-effects substitution models for phylogenetics via scalable gradient approximations"
3 / 3 papers shown
Title
Sacred and Profane: from the Involutive Theory of MCMC to Helpful Hamiltonian Hacks
N. Glatt-Holtz
Andrew J. Holbrook
J. Krometis
Cecilia F. Mondaini
Ami D. Sheth
49
0
0
22 Oct 2024
Torchtree: flexible phylogenetic model development and inference using PyTorch
Mathieu Fourment
Matthew Macaulay
Christiaan J. Swanepoel
Xiang Ji
M. Suchard
Frederick A Matsen IV
BDL
91
0
0
26 Jun 2024
On the surprising effectiveness of a simple matrix exponential derivative approximation, with application to global SARS-CoV-2
G. Didier
N. Glatt-Holtz
Andrew J Holbrook
Andrew F. Magee
M. Suchard
54
4
0
28 Jun 2023
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