Random-effects substitution models for phylogenetics via scalable
gradient approximations

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Random-effects substitution models for phylogenetics via scalable gradient approximations

23 March 2023

Andrew F. Magee

Andrew J Holbrook

Itzue W. Caviedes-Solis

IV FredrickA.Matsen

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Papers citing "Random-effects substitution models for phylogenetics via scalable gradient approximations"

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Title
Sacred and Profane: from the Involutive Theory of MCMC to Helpful Hamiltonian Hacks N. Glatt-Holtz Andrew J. Holbrook J. Krometis Cecilia F. Mondaini Ami D. Sheth 49 0 0 22 Oct 2024
Torchtree: flexible phylogenetic model development and inference using PyTorch Mathieu Fourment Matthew Macaulay Christiaan J. Swanepoel Xiang Ji M. Suchard Frederick A Matsen IV BDL 91 0 0 26 Jun 2024
On the surprising effectiveness of a simple matrix exponential derivative approximation, with application to global SARS-CoV-2 G. Didier N. Glatt-Holtz Andrew J Holbrook Andrew F. Magee M. Suchard 54 4 0 28 Jun 2023