Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation

18 March 2016

Konstantinos Kamnitsas

Papers citing "Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation"

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Title
DC-Seg: Disentangled Contrastive Learning for Brain Tumor Segmentation with Missing Modalities Haitao Li Feiyu Xiong Yiheng Mao Zhengyao Ding Zhengxing Huang 2 0 0 17 May 2025
IterMask3D: Unsupervised Anomaly Detection and Segmentation with Test-Time Iterative Mask Refinement in 3D Brain MR Ziyun Liang Xiaoqing Guo Wentian Xu Yasin Ibrahim Natalie Voets Pieter M Pretorius J. A. Noble Konstantinos Kamnitsas 29 0 0 07 Apr 2025
CALF: A Conditionally Adaptive Loss Function to Mitigate Class-Imbalanced Segmentation Bashir Alam Masa Cirkovic Mete Harun Akcay Md Kaf Shahrier S. Lafond Hergys Rexha Kurt Benke Sepinoud Azimi J. Arslan 30 0 0 06 Apr 2025
Dynamic Importance in Diffusion U-Net for Enhanced Image Synthesis Xi Wang Ziqi He Yang Zhou 37 0 0 04 Apr 2025
3D Convolutional Neural Networks for Improved Detection of Intracranial bleeding in CT Imaging Bargava Subramanian Naveen Kumarasami Praveen Shastry Kalyan Sivasailam Anandakumar D ... Harsha KG R. García-Vázquez Harini T Afshin Hussain Kishore Prasath Venkatesh 75 0 0 26 Mar 2025
Learning to segment anatomy and lesions from disparately labeled sources in brain MRI Meva Himmetoglu Ilja Ciernik E. Konukoglu 44 0 0 24 Mar 2025
RURANET++: An Unsupervised Learning Method for Diabetic Macular Edema Based on SCSE Attention Mechanisms and Dynamic Multi-Projection Head Clustering Wei Yang Yiran Zhu Jiayu Shen Yuhan Tang Chengchang Pan Hui He Yan Su Honggang Qi 71 0 0 27 Feb 2025
End-to-End Deep Learning for Structural Brain Imaging: A Unified Framework Yao Su Keqi Han Mingjie Zeng Lichao Sun Liang Zhan Carl Yang Lifang He Xiangnan Kong 34 0 0 23 Feb 2025
DSCA: A Digital Subtraction Angiography Sequence Dataset and Spatio-Temporal Model for Cerebral Artery Segmentation Qihang Xie Mengguo Guo Lei Mou Dan Zhang Da Chen Caifeng Shan Yitian Zhao Ruisheng Su Jiong Zhang 111 1 0 21 Feb 2025
SegHeD+: Segmentation of Heterogeneous Data for Multiple Sclerosis Lesions with Anatomical Constraints and Lesion-aware Augmentation Berke Doga Basaran Paul M. Matthews Wenjia Bai 81 0 0 14 Dec 2024
Medical Manifestation-Aware De-Identification Yuan Tian Shuo Wang Guangtao Zhai MedIm 73 0 0 14 Dec 2024
Automatic Prediction of Stroke Treatment Outcomes: Latest Advances and Perspectives Zeynel A. Samak Philip Clatworthy Majid Mirmehdi 73 1 0 06 Dec 2024
End-to-end Triple-domain PET Enhancement: A Hybrid Denoising-and-reconstruction Framework for Reconstructing Standard-dose PET Images from Low-dose PET Sinograms C. Jiang Mianxin Liu Kaicong Sun Dinggang Shen MedIm 72 0 0 04 Dec 2024
KAN-Mamba FusionNet: Redefining Medical Image Segmentation with Non-Linear Modeling Akansh Agrawal Akshan Agrawal Shashwat Gupta Priyanka Bagade Mamba 88 3 0 18 Nov 2024
MBDRes-U-Net: Multi-Scale Lightweight Brain Tumor Segmentation Network Longfeng Shen Yanqi Hou Jiacong Chen Liangjin Diao Yaxi Duan 29 0 0 04 Nov 2024
Improving 3D Medical Image Segmentation at Boundary Regions using Local Self-attention and Global Volume Mixing Daniya Najiha Abdul Kareem M. Fiaz Noa Novershtern Jacob Hanna Hisham Cholakkal 44 3 0 20 Oct 2024
SegHeD: Segmentation of Heterogeneous Data for Multiple Sclerosis Lesions with Anatomical Constraints Berke Doga Basaran Xinru Zhang Paul M. Matthews Wenjia Bai 34 1 0 02 Oct 2024
Bias Assessment and Data Drift Detection in Medical Image Analysis: A Survey Andrea Prenner Bernhard Kainz 40 0 0 26 Sep 2024
Towards the Discovery of Down Syndrome Brain Biomarkers Using Generative Models Jordi Malé Juan Fortea Mateus Rozalem Aranha Yann Heuzé Neus Martínez-Abadías Xavier Sevillano DiffM 29 1 0 20 Sep 2024
Multiscale Encoder and Omni-Dimensional Dynamic Convolution Enrichment in nnU-Net for Brain Tumor Segmentation Sahaj K. Mistry Sourav Saini Aashray Gupta Aayush Gupta Sunny Rai V. Jakhetiya Ujjwal Baid Sharath Chandra Guntuku 29 0 0 20 Sep 2024
multiPI-TransBTS: A Multi-Path Learning Framework for Brain Tumor Image Segmentation Based on Multi-Physical Information Hongjun Zhu Jiaohang Huang Kuo Chen Xuehui Ying Ying Qian MedIm 24 1 0 18 Sep 2024
ISLES'24: Improving final infarct prediction in ischemic stroke using multimodal imaging and clinical data Ezequiel de la Rosa Ruisheng Su Mauricio Reyes Roland Wiest E. O. Riedel ... D. Robben Susanne Wegener Jan S. Kirschke Benedikt Wiestler Bjoern H. Menze OOD 22 1 0 20 Aug 2024
Segmenting Small Stroke Lesions with Novel Labeling Strategies Liang Shang Zhengyang Lou Andrew L. Alexander V. Prabhakaran W. Sethares Veena A. Nair N. Adluru 21 2 0 06 Aug 2024
GLAM: Glomeruli Segmentation for Human Pathological Lesions using Adapted Mouse Model Lining Yu Mengmeng Yin Ruining Deng Quan Liu Tianyuan Yao ... Yaohong Wang Shilin Zhao Haichun Yang Haichun Yang Yuankai Huo MedIm 24 0 0 25 Jul 2024
Trans2Unet: Neural fusion for Nuclei Semantic Segmentation Dinh-Phu Tran Quoc-Anh Nguyen Van-Truong Pham Thi-Thao Tran ViT MedIm 29 5 0 24 Jul 2024
FedMedICL: Towards Holistic Evaluation of Distribution Shifts in Federated Medical Imaging Kumail Alhamoud Yasir Ghunaim Motasem Alfarra Thomas Hartvigsen Philip Torr Guohao Li Adel Bibi Marzyeh Ghassemi OOD 41 2 0 11 Jul 2024
Relative Difficulty Distillation for Semantic Segmentation Dong Liang Yue Sun Yun Du Songcan Chen Sheng-Jun Huang 31 3 0 04 Jul 2024
Multimodal Data Integration for Precision Oncology: Challenges and Future Directions Huajun Zhou Fengtao Zhou Chenyu Zhao Yingxue Xu Luyang Luo Hao Chen 32 5 0 28 Jun 2024
Feasibility of Federated Learning from Client Databases with Different Brain Diseases and MRI Modalities Felix Wagner Wentian Xu Pramit Saha Ziyun Liang Daniel Whitehouse David Menon Virginia Newcombe Natalie Voets J. A. Noble Konstantinos Kamnitsas 49 4 0 17 Jun 2024
BrainFounder: Towards Brain Foundation Models for Neuroimage Analysis Joseph Cox Peng Liu Skylar E. Stolte Yunchao Yang Kang Liu Kyle B. See Huiwen Ju Ruogu Fang MedIm 26 13 0 14 Jun 2024
Interactive Image Selection and Training for Brain Tumor Segmentation Network Matheus A. Cerqueira Flávia Sprenger Bernardo C. A. Teixeira Alexandre X. Falcão 46 3 0 05 Jun 2024
U-KAN Makes Strong Backbone for Medical Image Segmentation and Generation Chenxin Li Xinyu Liu W. J. Li Cheng Wang Hengyu Liu Yifan Liu Zhen Chen Yixuan Yuan MedIm DiffM SSeg 62 117 0 05 Jun 2024
IterMask2: Iterative Unsupervised Anomaly Segmentation via Spatial and Frequency Masking for Brain Lesions in MRI Ziyun Liang Xiaoqing Guo J. A. Noble Konstantinos Kamnitsas 30 3 0 04 Jun 2024
Feasibility and benefits of joint learning from MRI databases with different brain diseases and modalities for segmentation Wentian Xu Matthew Moffat Thalia Seale Ziyun Liang Felix Wagner ... David Menon Virginia Newcombe Natalie Voets Abhirup Banerjee Konstantinos Kamnitsas 39 3 0 28 May 2024
Hybrid Multihead Attentive Unet-3D for Brain Tumor Segmentation Muhammad Ansab Butt Absaar Ul Jabbar 29 0 0 22 May 2024
Multicenter Privacy-Preserving Model Training for Deep Learning Brain Metastases Autosegmentation Yixing Huang Zahra Khodabakhshi A. Gomaa Manuel Schmidt R. Fietkau Matthias Guckenberger N. Andratschke Christoph Bert S. Tanadini-Lang F. Putz 39 5 0 17 May 2024
A Foundation Model for Brain Lesion Segmentation with Mixture of Modality Experts Xinru Zhang N. Ou Berke Doga Basaran Marco Visentin Mengyun Qiao ... Ouyang Cheng Yaou Liu Paul M. Matthew Chuyang Ye Wenjia Bai MedIm 40 4 0 16 May 2024
Implicit Generative Prior for Bayesian Neural Networks Yijia Liu Xiao Wang BDL 24 1 0 27 Apr 2024
A review of deep learning-based information fusion techniques for multimodal medical image classification Yi-Hsuan Li Mostafa EL HABIB DAHO Pierre-Henri Conze Rachid Zeghlache Hugo Le Boité R. Tadayoni B. Cochener M. Lamard G. Quellec 38 31 0 23 Apr 2024
Contextual Embedding Learning to Enhance 2D Networks for Volumetric Image Segmentation Zhuoyuan Wang Dongming Sun Xiangyun Zeng Ruodai Wu Yi Wang 39 1 0 02 Apr 2024
Clustering Propagation for Universal Medical Image Segmentation Yuhang Ding Liulei Li Wenguan Wang Yi Yang 46 9 0 25 Mar 2024
Semantics from Space: Satellite-Guided Thermal Semantic Segmentation Annotation for Aerial Field Robots Connor T. Lee Saraswati Soedarmadji Matthew O. Anderson Anthony J. Clark Soon-Jo Chung 43 5 0 21 Mar 2024
Building Brain Tumor Segmentation Networks with User-Assisted Filter Estimation and Selection Matheus A. Cerqueira Flávia Sprenger B. C. Teixeira A. X. Falcão 35 10 0 19 Mar 2024
How we won BraTS 2023 Adult Glioma challenge? Just faking it! Enhanced Synthetic Data Augmentation and Model Ensemble for brain tumour segmentation André Ferreira Naida Solak Jianning Li Philipp Dammann Jens Kleesiek Victor Alves Jan Egger 32 13 0 27 Feb 2024
Predicting Hypoxia in Brain Tumors from Multiparametric MRI Daniele Perlo G. Kanli Selma Boudissa O. Keunen AI4CE 18 0 0 25 Jan 2024
Few-shot learning for COVID-19 Chest X-Ray Classification with Imbalanced Data: An Inter vs. Intra Domain Study Alejandro Galán-Cuenca Antonio Javier Gallego Marcelo Saval-Calvo A. Pertusa 32 6 0 18 Jan 2024
Integrating Edges into U-Net Models with Explainable Activation Maps for Brain Tumor Segmentation using MR Images Subin Sahayam Umarani Jayaraman 25 1 0 02 Jan 2024
Train-Free Segmentation in MRI with Cubical Persistent Homology Anton François Raphael Tinarrage 3DV 28 1 0 02 Jan 2024
Learning Multi-axis Representation in Frequency Domain for Medical Image Segmentation Jiacheng Ruan Jingsheng Gao Mingye Xie Suncheng Xiang 22 2 0 28 Dec 2023
Continual Learning in Medical Image Analysis: A Comprehensive Review of Recent Advancements and Future Prospects Pratibha Kumari Joohi Chauhan Afshin Bozorgpour Boqiang Huang Reza Azad Dorit Merhof 55 11 0 28 Dec 2023