Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation

18 March 2016

Konstantinos Kamnitsas

Papers citing "Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation"

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Title
Deep Recurrent Level Set for Segmenting Brain Tumors T. Hoang Raajitha Gummadi Marios Savvides 3DV 6 36 0 10 Oct 2018
Comparison of U-net-based Convolutional Neural Networks for Liver Segmentation in CT H. Meine G. Chlebus Mohsen Ghafoorian I. Endo A. Schenk SSeg MedIm 16 12 0 09 Oct 2018
Glioma Segmentation with Cascaded Unet Dmitrii Lachinov Evgeny Vasiliev Vadim Turlapov 21 54 0 09 Oct 2018
Co-Learning Feature Fusion Maps from PET-CT Images of Lung Cancer Ashnil Kumar M. Fulham D. Feng Jinman Kim MedIm 27 165 0 05 Oct 2018
No New-Net Fabian Isensee Philipp Kickingereder Wolfgang Wick Martin Bendszus Klaus H. Maier-Hein SSeg 37 395 0 27 Sep 2018
Exclusive Independent Probability Estimation using Deep 3D Fully Convolutional DenseNets: Application to IsoIntense Infant Brain MRI Segmentation Seyed Raein Hashemi S. Prabhu Simon K. Warfield Ali Gholipour 3DV 24 6 0 21 Sep 2018
Retrospective correction of Rigid and Non-Rigid MR motion artifacts using GANs Karim Armanious S. Gatidis K. Nikolaou Bin Yang Thomas Kustner MedIm 11 39 0 17 Sep 2018
Multi Modal Convolutional Neural Networks for Brain Tumor Segmentation Mehmet Aygün Y. Sahin Gözde B. Ünal MedIm 16 21 0 17 Sep 2018
Automatic 3D bi-ventricular segmentation of cardiac images by a shape-refined multi-task deep learning approach Jinming Duan Ghalib A. Bello Jo Schlemper Wenjia Bai T. Dawes C. Biffi A. de Marvao Georgia Doumou D. O’Regan Daniel Rueckert MedIm 16 5 0 26 Aug 2018
Attention Gated Networks: Learning to Leverage Salient Regions in Medical Images Jo Schlemper Ozan Oktay M. Schaap M. Heinrich Bernhard Kainz Ben Glocker Daniel Rueckert MedIm 15 1,447 0 22 Aug 2018
Deep Boosted Regression for MR to CT Synthesis Kerstin Kläser P. Markiewicz M. Ranzini Wenqi Li Marc Modat B. Hutton David Atkinson K. Thielemans M. Jorge Cardoso Sebastien Ourselin OOD MedIm 14 20 0 22 Aug 2018
Simultaneous synthesis of FLAIR and segmentation of white matter hypointensities from T1 MRIs Mauricio Orbes-Arteaga M. Jorge Cardoso Lauge Sørensen Marc Modat Sébastien Ourselin Mads Nielsen A. Pai 24 15 0 20 Aug 2018
Deeper Image Quality Transfer: Training Low-Memory Neural Networks for 3D Images Stefano B. Blumberg Ryutaro Tanno Iasonas Kokkinos Daniel C. Alexander MedIm 21 56 0 16 Aug 2018
Holographic Visualisation of Radiology Data and Automated Machine Learning-based Medical Image Segmentation Lucian Trestioreanu 38 2 0 15 Aug 2018
DeepNeuro: an open-source deep learning toolbox for neuroimaging Andrew Beers James M. Brown Ken Chang K. Hoebel Elizabeth R Gerstner Bruce Rosen Jayashree Kalpathy-Cramer MedIm 14 38 0 14 Aug 2018
Automatic Plaque Detection in IVOCT Pullbacks Using Convolutional Neural Networks N. Gessert Matthias Lutz Markus Heyder S. Latus D. Leistner Youssef S. Abdelwahed Alexander Schlaefer 29 89 0 13 Aug 2018
Deeply Self-Supervised Contour Embedded Neural Network Applied to Liver Segmentation Minyoung Chung Jingyu Lee Minkyung Lee Jeongjin Lee Y. Shin MedIm 24 27 0 02 Aug 2018
Tumor Delineation For Brain Radiosurgery by a ConvNet and Non-Uniform Patch Generation Egor Krivov V. Kostjuchenko A. Dalechina B. Shirokikh Gleb Makarchuk A. Denisenko A. Golanov Mikhail Belyaev MedIm 22 5 0 01 Aug 2018
Synthesizing CT from Ultrashort Echo-Time MR Images via Convolutional Neural Networks Snehashis Roy J. Butman D. L. Pham MedIm 9 27 0 27 Jul 2018
TBI Contusion Segmentation from MRI using Convolutional Neural Networks Snehashis Roy J. Butman L. Chan D. L. Pham MedIm 16 22 0 27 Jul 2018
Towards a Deep Unified Framework for Nuclear Reactor Perturbation Analysis Fabio De Sousa Ribeiro Francesco Calivá D. Chionis A. Dokhane A. Mylonakis C. Demazière Georgios Leontidis Stefanos D. Kollias 32 23 0 26 Jul 2018
Multi-Scale Gradual Integration CNN for False Positive Reduction in Pulmonary Nodule Detection Bum-Chae Kim Jun-Sik Choi Heung-Il Suk 4 73 0 24 Jul 2018
3D Convolutional Neural Networks for Tumor Segmentation using Long-range 2D Context Pawel Mlynarski H. Delingette A. Criminisi N. Ayache MedIm 3DV 13 105 0 23 Jul 2018
Brain Tumor Segmentation and Tractographic Feature Extraction from Structural MR Images for Overall Survival Prediction Po-Yu Kao Thuyen Ngo Angela Zhang Jefferson W. Chen B. S. Manjunath 20 84 0 20 Jul 2018
Aleatoric uncertainty estimation with test-time augmentation for medical image segmentation with convolutional neural networks Guotai Wang Wenqi Li Michael Aertsen Jan Deprest Sebastien Ourselin Tom Kamiel Magda Vercauteren UQCV MedIm OOD 52 581 0 19 Jul 2018
A Modality-Adaptive Method for Segmenting Brain Tumors and Organs-at-Risk in Radiation Therapy Planning Mikael Agn P. Rosenschöld Oula Puonti M. Lundemann L. Mancini A. Papadaki Steffi Thust John Ashburner I. Law Koen van Leemput 7 37 0 18 Jul 2018
Method for motion artifact reduction using a convolutional neural network for dynamic contrast enhanced MRI of the liver D. Tamada M. Kromrey H. Onishi U. Motosugi MedIm 12 93 0 18 Jul 2018
A Generic Approach to Lung Field Segmentation from Chest Radiographs using Deep Space and Shape Learning Awais Mansoor Juan J. Cerrolaza Geovanny F. Perez E. Biggs K. Okada G. Nino M. Linguraru 14 26 0 11 Jul 2018
A Weakly Supervised Adaptive DenseNet for Classifying Thoracic Diseases and Identifying Abnormalities Bo Zhou Yuemeng Li Jiangcong Wang MedIm 34 26 0 03 Jul 2018
3D RoI-aware U-Net for Accurate and Efficient Colorectal Tumor Segmentation Yijie Huang Qi Dou Zixian Wang Li-Zhi Liu Ying Jin Chaozhuo Li Lisheng Wang Hao Chen R. Xu 14 57 0 27 Jun 2018
MedGAN: Medical Image Translation using GANs Karim Armanious Chenming Yang Marc Fischer Thomas Kustner K. Nikolaou S. Gatidis Bin Yang GAN MedIm 14 537 0 17 Jun 2018
Deep Generative Models in the Real-World: An Open Challenge from Medical Imaging Xiaoran Chen Nick Pawlowski Martin Rajchl Ben Glocker E. Konukoglu OOD MedIm 22 49 0 14 Jun 2018
Boosted Training of Convolutional Neural Networks for Multi-Class Segmentation L. Berger E. Hyde Matthew D. Gibb N. Pavithran Garin Kelly F. Mumtaz Sébastien Ourselin SSeg 14 2 0 13 Jun 2018
Unsupervised Detection of Lesions in Brain MRI using constrained adversarial auto-encoders Xiaoran Chen E. Konukoglu MedIm 35 264 0 13 Jun 2018
Fully Convolutional Network for Melanoma Diagnostics Adon Phillips I. Teo J. Lang MedIm 16 2 0 12 Jun 2018
NeuroNet: Fast and Robust Reproduction of Multiple Brain Image Segmentation Pipelines Martin Rajchl Nick Pawlowski Daniel Rueckert Paul M. Matthews Ben Glocker SSeg 11 35 0 11 Jun 2018
Quantitative Phase Imaging and Artificial Intelligence: A Review YoungJu Jo Hyungjoon Cho Sang Yun Lee Gunho Choi Geon Kim Hyun-Seok Min Yongkeun Park 32 154 0 06 Jun 2018
Domain Adaptation for MRI Organ Segmentation using Reverse Classification Accuracy V. Valindria I. Lavdas Wenjia Bai Konstantinos Kamnitsas E. Aboagye A. Rockall Daniel Rueckert Ben Glocker OOD 18 21 0 01 Jun 2018
Learning Data Augmentation for Brain Tumor Segmentation with Coarse-to-Fine Generative Adversarial Networks Tony C. W. Mok Albert C. S. Chung GAN MedIm 24 89 0 29 May 2018
RetainVis: Visual Analytics with Interpretable and Interactive Recurrent Neural Networks on Electronic Medical Records Bum Chul Kwon Min-Je Choi J. Kim Edward Choi Young Bin Kim Soonwook Kwon Jimeng Sun Jaegul Choo 30 251 0 28 May 2018
Multi-region segmentation of bladder cancer structures in MRI with progressive dilated convolutional networks Jose Dolz Xiaopan Xu Jérôme Rony Jing Yuan Yang Liu Eric Granger Christian Desrosiers Xi Zhang Ismail Ben Ayed Hongbing Lu MedIm 20 80 0 28 May 2018
Autofocus Layer for Semantic Segmentation Yao Qin Konstantinos Kamnitsas Siddharth Ancha Jay Nanavati G. Cottrell A. Criminisi A. Nori SSeg MedIm 24 111 0 22 May 2018
Automatic segmentation of the spinal cord and intramedullary multiple sclerosis lesions with convolutional neural networks C. Gros B. Leener A. Badji J. Maranzano Dominique Eden ... J. Doyon T. Shepherd Erik Charlson S. Narayanan Julien Cohen-Adad 33 215 0 16 May 2018
Attaining human-level performance with atlas location autocontext for anatomical landmark detection in 3D CT data Alison Q. OÑeil Antanas Kascenas Josep Henry D. Wyeth M. Shepherd ... L. Clunie Carrie Sansom Evelina Seduikyte K. Muir Ian Poole 16 40 0 14 May 2018
Abdominal multi-organ segmentation with organ-attention networks and statistical fusion Yan Wang Yuyin Zhou Wei Shen Seyoun Park Elliot K. Fishman Alan Yuille 14 215 0 23 Apr 2018
Convolutional Neural Networks for Skull-stripping in Brain MR Imaging using Consensus-based Silver standard Masks Oeslle Lucena R. Souza Letícia Rittner Richard Frayne R. Lotufo 11 3 0 13 Apr 2018
Iterative fully convolutional neural networks for automatic vertebra segmentation and identification Nikolas Lessmann Bram van Ginneken P. A. Jong Ivana Išgum 14 212 0 12 Apr 2018
Generative Adversarial Training for MRA Image Synthesis Using Multi-Contrast MRI Sahin Olut Y. Sahin Ugur Demir Gözde B. Ünal MedIm GAN 23 66 0 12 Apr 2018
Attention U-Net: Learning Where to Look for the Pancreas Ozan Oktay Jo Schlemper Loic Le Folgoc M. J. Lee M. Heinrich ... Jingyu Sun Nils Y. Hammerla Bernhard Kainz Ben Glocker Daniel Rueckert SSeg 39 4,942 0 11 Apr 2018
HyperDense-Net: A hyper-densely connected CNN for multi-modal image segmentation Jose Dolz Karthik Gopinath Jing Yuan H. Lombaert Christian Desrosiers Ismail ben Ayed 3DH 14 431 0 09 Apr 2018