MIMIC-Extract: A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III

19 July 2019

Shirly Wang

Matthew B. A. McDermott

Papers citing "MIMIC-Extract: A Data Extraction, Preprocessing, and Representation Pipeline for MIMIC-III"

36 / 86 papers shown

Title
Learning from a Biased Sample Roshni Sahoo Lihua Lei Stefan Wager 24 17 0 05 Sep 2022
Imputation Strategies Under Clinical Presence: Impact on Algorithmic Fairness Vincent Jeanselme Maria De-Arteaga Zhe Zhang Jessica Barrett Brian D. M. Tom FaML 35 11 0 13 Aug 2022
MULTIPAR: Supervised Irregular Tensor Factorization with Multi-task Learning Yifei Ren Jian Lou Li Xiong Joyce C. Ho Xiaoqian Jiang Sivasubramanium Bhavan OOD 24 3 0 01 Aug 2022
Density-Aware Personalized Training for Risk Prediction in Imbalanced Medical Data Zepeng Huo Xiaoning Qian Shuai Huang Zhangyang Wang Bobak J. Mortazavi OOD 20 3 0 23 Jul 2022
Unsupervised pre-training of graph transformers on patient population graphs Chantal Pellegrini Nassir Navab Anees Kazi MedIm AI4CE 44 11 0 21 Jul 2022
GenHPF: General Healthcare Predictive Framework with Multi-task Multi-source Learning Kyunghoon Hur Jungwoo Oh Junu Kim Jiyoun Kim Min Jae Lee Eunbyeol Choi Seong-Eun Moon Young-Hak Kim Louis Atallah Edward Choi AI4TS 14 22 0 20 Jul 2022
Boosting the interpretability of clinical risk scores with intervention predictions Eric Loreaux Ke Yu Jonas Kemp Martin G. Seneviratne Christina W. Chen ... Ivan V. Protsyuk Natalie Harris Alexander DÁmour Steve Yadlowsky Ming-Jun Chen 11 1 0 06 Jul 2022
Classification of datasets with imputed missing values: does imputation quality matter? Tolou Shadbahr M. Roberts Jan Stanczuk J. Gilbey P. Teare ... T. Mirtti A. Rannikko J. Aston Jing Tang Carola-Bibiane Schönlieb 30 52 0 16 Jun 2022
DeepJoint: Robust Survival Modelling Under Clinical Presence Shift Vincent Jeanselme G. Martin Niels Peek M. Sperrin Brian D. M. Tom Jessica Barrett OOD 34 4 0 26 May 2022
Clinical Prompt Learning with Frozen Language Models Niall Taylor Yi Zhang Dan W Joyce A. Nevado-Holgado Andrey Kormilitzin VLM LM&MA 16 31 0 11 May 2022
An Extensive Data Processing Pipeline for MIMIC-IV Mehak Gupta Brennan M Gallamoza Nicolas Cutrona Pranjal Dhakal Raphael Poulain Rahmatollah Beheshti AI4TS 29 41 0 29 Apr 2022
Causal Transformer for Estimating Counterfactual Outcomes Valentyn Melnychuk Dennis Frauen Stefan Feuerriegel CML 35 91 0 14 Apr 2022
Learning Optimal Dynamic Treatment Regimes Using Causal Tree Methods in Medicine Theresa Blümlein Joel Persson Stefan Feuerriegel CML 35 11 0 14 Apr 2022
EHRKit: A Python Natural Language Processing Toolkit for Electronic Health Record Texts Irene Z Li Keen You Yujie Qiao Lucas Huang Chia-Chun Hsieh Benjamin Rosand Xiangru Tang Dragomir R. Radev 42 4 0 13 Apr 2022
Unsupervised Pre-Training on Patient Population Graphs for Patient-Level Predictions Chantal Pellegrini Anees Kazi Nassir Navab 19 2 0 23 Mar 2022
Estimating average causal effects from patient trajectories Dennis Frauen Tobias Hatt Valentyn Melnychuk Stefan Feuerriegel OOD CML 19 25 0 02 Mar 2022
Diagnosing failures of fairness transfer across distribution shift in real-world medical settings Jessica Schrouff Natalie Harris Oluwasanmi Koyejo Ibrahim M. Alabdulmohsin Eva Schnider ... Vivek Natarajan Alan Karthikesalingam Katherine A. Heller Silvia Chiappa Alexander DÁmour OOD 55 53 0 02 Feb 2022
Conditional Generation of Medical Time Series for Extrapolation to Underrepresented Populations Simon Bing Andrea Dittadi Stefan Bauer Patrick Schwab SyDa 20 17 0 20 Jan 2022
Generating Synthetic Mixed-type Longitudinal Electronic Health Records for Artificial Intelligent Applications Jin Li B. Cairns Jingsong Li T. Zhu SyDa 38 69 0 22 Dec 2021
Deconfounding Temporal Autoencoder: Estimating Treatment Effects over Time Using Noisy Proxies Milan Kuzmanovic Tobias Hatt Stefan Feuerriegel CML 50 21 0 06 Dec 2021
How to Leverage Multimodal EHR Data for Better Medical Predictions? Bo Yang Lijun Wu 15 41 0 29 Oct 2021
Real-time Mortality Prediction Using MIMIC-IV ICU Data Via Boosted Nonparametric Hazards Z. Nowroozilarki Arash Pakbin J. Royalty Donald K. K. Lee B. Mortazavi 13 8 0 17 Oct 2021
Using Clinical Drug Representations for Improving Mortality and Length of Stay Predictions Batuhan Bardak Mehmet Tan 24 2 0 17 Oct 2021
Temporal Dependencies in Feature Importance for Time Series Predictions Kin Kwan Leung Clayton Rooke Jonathan Smith S. Zuberi M. Volkovs OOD AI4TS 31 24 0 29 Jul 2021
BEDS-Bench: Behavior of EHR-models under Distributional Shift--A Benchmark Anand Avati Martin G. Seneviratne Emily Xue Zhen Xu Balaji Lakshminarayanan Andrew M. Dai OOD CML 20 8 0 17 Jul 2021
MultiBench: Multiscale Benchmarks for Multimodal Representation Learning Paul Pu Liang Yiwei Lyu Xiang Fan Zetian Wu Yun Cheng ... Peter Wu Michelle A. Lee Yuke Zhu Ruslan Salakhutdinov Louis-Philippe Morency VLM 32 159 0 15 Jul 2021
Neural Natural Language Processing for Unstructured Data in Electronic Health Records: a Review Irene Z Li Jessica Pan Jeremy Goldwasser Neha Verma Wai Pan Wong ... Matthew Zhang David Chang R. Taylor H. Krumholz Dragomir R. Radev BDL 19 154 0 07 Jul 2021
MIMIC-IF: Interpretability and Fairness Evaluation of Deep Learning Models on MIMIC-IV Dataset Chuizheng Meng Loc Trinh Nan Xu Yan Liu 24 30 0 12 Feb 2021
Improving Clinical Outcome Predictions Using Convolution over Medical Entities with Multimodal Learning Batuhan Bardak Mehmet Tan 23 35 0 24 Nov 2020
Chasing Your Long Tails: Differentially Private Prediction in Health Care Settings Vinith Suriyakumar Nicolas Papernot Anna Goldenberg Marzyeh Ghassemi OOD 20 64 0 13 Oct 2020
Cardea: An Open Automated Machine Learning Framework for Electronic Health Records Sarah Alnegheimish Najat Alrashed Faisal Aleissa Shahad Althobaiti Dongyu Liu Mansour Alsaleh K. Veeramachaneni OOD 6 9 0 01 Oct 2020
An Empirical Characterization of Fair Machine Learning For Clinical Risk Prediction Stephen R. Pfohl Agata Foryciarz N. Shah FaML 28 108 0 20 Jul 2020
A Comprehensive Evaluation of Multi-task Learning and Multi-task Pre-training on EHR Time-series Data Matthew B. A. McDermott Bret A. Nestor Evan Kim Wancong Zhang Anna Goldenberg Peter Szolovits Marzyeh Ghassemi Csail AI4TS 16 15 0 20 Jul 2020
Discovering Invariances in Healthcare Neural Networks M. T. Bahadori Layne Price OOD 21 0 0 08 Nov 2019
Feature Robustness in Non-stationary Health Records: Caveats to Deployable Model Performance in Common Clinical Machine Learning Tasks Bret A. Nestor Matthew B. A. McDermott Willie Boag G. Berner Tristan Naumann Michael C. Hughes Anna Goldenberg Marzyeh Ghassemi OOD 21 109 0 02 Aug 2019
Recurrent Neural Networks for Multivariate Time Series with Missing Values Zhengping Che S. Purushotham Kyunghyun Cho David Sontag Yan Liu AI4TS 219 1,897 0 06 Jun 2016