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GatorTron: A Large Clinical Language Model to Unlock Patient Information
  from Unstructured Electronic Health Records

GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records

2 February 2022
Xi Yang
Aokun Chen
Nima M. Pournejatian
Hoo-Chang Shin
Kaleb E. Smith
Christopher Parisien
Colin B. Compas
Cheryl Martin
Mona G. Flores
Ying Zhang
Tanja Magoc
C. Harle
Gloria P. Lipori
Duane A. Mitchell
W. Hogan
E. Shenkman
Jiang Bian
Yonghui Wu
    AI4MH
    LM&MA
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Papers citing "GatorTron: A Large Clinical Language Model to Unlock Patient Information from Unstructured Electronic Health Records"

50 / 156 papers shown
Title
Benefits and Harms of Large Language Models in Digital Mental Health
Benefits and Harms of Large Language Models in Digital Mental Health
Munmun De Choudhury
Sachin R. Pendse
Neha Kumar
LM&MA
AI4MH
22
41
0
07 Nov 2023
An Interdisciplinary Outlook on Large Language Models for Scientific
  Research
An Interdisciplinary Outlook on Large Language Models for Scientific Research
James Boyko
Joseph Cohen
Nathan Fox
Maria Han Veiga
Jennifer I-Hsiu Li
...
Andreas H. Rauch
Kenneth N. Reid
Soumi Tribedi
Anastasia Visheratina
Xin Xie
36
17
0
03 Nov 2023
Large Language Models Illuminate a Progressive Pathway to Artificial
  Healthcare Assistant: A Review
Large Language Models Illuminate a Progressive Pathway to Artificial Healthcare Assistant: A Review
Mingze Yuan
Peng Bao
Jiajia Yuan
Yunhao Shen
Zi Chen
...
Jie Zhao
Yang Chen
Li Zhang
Lin Shen
Bin Dong
ELM
LM&MA
41
13
0
03 Nov 2023
Generating Medical Prescriptions with Conditional Transformer
Generating Medical Prescriptions with Conditional Transformer
Samuel Belkadi
Nicolo Micheletti
Lifeng Han
Warren Del-Pinto
Goran Nenadic
MedIm
27
5
0
30 Oct 2023
The Impact of Performance Expectancy, Workload, Risk, and Satisfaction
  on Trust in ChatGPT: Cross-sectional Survey Analysis
The Impact of Performance Expectancy, Workload, Risk, and Satisfaction on Trust in ChatGPT: Cross-sectional Survey Analysis
Hamid Shamszare
Avishek Choudhury
49
12
0
20 Oct 2023
Safe RLHF: Safe Reinforcement Learning from Human Feedback
Safe RLHF: Safe Reinforcement Learning from Human Feedback
Josef Dai
Xuehai Pan
Ruiyang Sun
Jiaming Ji
Xinbo Xu
Mickel Liu
Yizhou Wang
Yaodong Yang
22
284
0
19 Oct 2023
Large Models for Time Series and Spatio-Temporal Data: A Survey and
  Outlook
Large Models for Time Series and Spatio-Temporal Data: A Survey and Outlook
Ming Jin
Qingsong Wen
Yuxuan Liang
Chaoli Zhang
Siqiao Xue
...
Shirui Pan
Vincent S. Tseng
Yu Zheng
Lei Chen
Hui Xiong
AI4TS
SyDa
31
116
0
16 Oct 2023
Question Answering for Electronic Health Records: A Scoping Review of
  datasets and models
Question Answering for Electronic Health Records: A Scoping Review of datasets and models
Jayetri Bardhan
Kirk Roberts
Daisy Zhe Wang
21
0
0
12 Oct 2023
On the Impact of Cross-Domain Data on German Language Models
On the Impact of Cross-Domain Data on German Language Models
Amin Dada
Aokun Chen
C.A.I. Peng
Kaleb E. Smith
Ahmad Idrissi-Yaghir
...
Daniel Truhn
Jan Egger
Jiang Bian
Jens Kleesiek
Yonghui Wu
17
4
0
11 Oct 2023
An Analysis on Large Language Models in Healthcare: A Case Study of
  BioBERT
An Analysis on Large Language Models in Healthcare: A Case Study of BioBERT
Shyni Sharaf
V. Anoop
LM&MA
9
2
0
11 Oct 2023
Computational Pathology at Health System Scale -- Self-Supervised
  Foundation Models from Three Billion Images
Computational Pathology at Health System Scale -- Self-Supervised Foundation Models from Three Billion Images
Gabriele Campanella
Ricky Kwan
Eugene Fluder
Jennifer Zeng
A. Stock
...
Adam J. Schoenfeld
Chad M. Vanderbilt
P. Kovatch
Carlos Cordon-Cardo
Thomas J. Fuchs
MedIm
58
24
0
10 Oct 2023
Model Tuning or Prompt Tuning? A Study of Large Language Models for
  Clinical Concept and Relation Extraction
Model Tuning or Prompt Tuning? A Study of Large Language Models for Clinical Concept and Relation Extraction
C.A.I. Peng
Xi Yang
Kaleb E. Smith
Zehao Yu
Aokun Chen
Jiang Bian
Yonghui Wu
VLM
LRM
23
28
0
10 Oct 2023
Redefining Digital Health Interfaces with Large Language Models
Redefining Digital Health Interfaces with Large Language Models
F. Imrie
Paulius Rauba
M. Schaar
AI4MH
LM&MA
19
3
0
05 Oct 2023
Identifying and Mitigating Privacy Risks Stemming from Language Models:
  A Survey
Identifying and Mitigating Privacy Risks Stemming from Language Models: A Survey
Victoria Smith
Ali Shahin Shamsabadi
Carolyn Ashurst
Adrian Weller
PILM
27
24
0
27 Sep 2023
CPLLM: Clinical Prediction with Large Language Models
CPLLM: Clinical Prediction with Large Language Models
Ofir Ben Shoham
Nadav Rappoport
LM&MA
19
24
0
20 Sep 2023
Retrieving Evidence from EHRs with LLMs: Possibilities and Challenges
Retrieving Evidence from EHRs with LLMs: Possibilities and Challenges
Hiba Ahsan
Denis Jered McInerney
Jisoo Kim
Christopher Potter
Geoffrey S. Young
Silvio Amir
Byron C. Wallace
19
12
0
08 Sep 2023
Publicly Shareable Clinical Large Language Model Built on Synthetic
  Clinical Notes
Publicly Shareable Clinical Large Language Model Built on Synthetic Clinical Notes
Sunjun Kweon
Junu Kim
Jiyoun Kim
Sujeong Im
Eunbyeol Cho
...
Seungjin Baek
Chang Hoon Han
Yoon Bin Jung
Yohan Jo
E. Choi
LM&MA
ELM
15
36
0
01 Sep 2023
Large language models in medicine: the potentials and pitfalls
Large language models in medicine: the potentials and pitfalls
J. Omiye
Haiwen Gui
Shawheen J. Rezaei
James Zou
Roxana Daneshjou
LM&MA
16
64
0
31 Aug 2023
Enhancing Psychological Counseling with Large Language Model: A
  Multifaceted Decision-Support System for Non-Professionals
Enhancing Psychological Counseling with Large Language Model: A Multifaceted Decision-Support System for Non-Professionals
Guanghui Fu
Qing Zhao
Jianqiang Li
Dan Luo
Changwei Song
...
Fan Wang
Yan Wang
Lijuan Cheng
Juan Zhang
B. Yang
OffRL
24
33
0
29 Aug 2023
Considerations for health care institutions training large language
  models on electronic health records
Considerations for health care institutions training large language models on electronic health records
Weipeng Zhou
Danielle Bitterman
Majid Afshar
Timothy A. Miller
LM&MA
15
0
0
24 Aug 2023
Utilizing Semantic Textual Similarity for Clinical Survey Data Feature
  Selection
Utilizing Semantic Textual Similarity for Clinical Survey Data Feature Selection
Benjamin C. Warner
Ziqi Xu
S. Haroutounian
Thomas Kannampallil
Chenyang Lu
22
2
0
19 Aug 2023
Large Language Models for Granularized Barrett's Esophagus Diagnosis
  Classification
Large Language Models for Granularized Barrett's Esophagus Diagnosis Classification
Jenna Kefeli
Ali Soroush
Courtney J. Diamond
H. Zylberberg
Benjamin May
J. Abrams
C. Weng
Nicholas Tatonetti
13
1
0
16 Aug 2023
Large Language Models and Knowledge Graphs: Opportunities and Challenges
Large Language Models and Knowledge Graphs: Opportunities and Challenges
Jeff Z. Pan
Simon Razniewski
Jan-Christoph Kalo
Sneha Singhania
Jiaoyan Chen
...
Gerard de Melo
A. Bonifati
Edlira Vakaj
M. Dragoni
D. Graux
KELM
28
72
0
11 Aug 2023
Enhancing Phenotype Recognition in Clinical Notes Using Large Language
  Models: PhenoBCBERT and PhenoGPT
Enhancing Phenotype Recognition in Clinical Notes Using Large Language Models: PhenoBCBERT and PhenoGPT
Jing Yang
Cong Liu
Wendy Deng
Dangwei Wu
C. Weng
Yunyun Zhou
Kai Wang
14
20
0
11 Aug 2023
From Military to Healthcare: Adopting and Expanding Ethical Principles
  for Generative Artificial Intelligence
From Military to Healthcare: Adopting and Expanding Ethical Principles for Generative Artificial Intelligence
David Oniani
Jordan Hilsman
Yifan Peng
COL
C. R. K. Poropatich
C. J. C. Pamplin
L. G. L. Legault
Yanshan Wang
AI4TS
22
11
0
04 Aug 2023
Multimodal LLMs for health grounded in individual-specific data
Multimodal LLMs for health grounded in individual-specific data
Anastasiya Belyaeva
J. Cosentino
F. Hormozdiari
Krish Eswaran
S. Shetty
Greg C. Corrado
Andrew Carroll
Cory Y. McLean
N. Furlotte
LM&MA
33
49
0
18 Jul 2023
Certified Robustness for Large Language Models with Self-Denoising
Certified Robustness for Large Language Models with Self-Denoising
Zhen Zhang
Guanhua Zhang
Bairu Hou
Wenqi Fan
Qing Li
Sijia Liu
Yang Zhang
Shiyu Chang
11
22
0
14 Jul 2023
Interpreting deep embeddings for disease progression clustering
Interpreting deep embeddings for disease progression clustering
Anna Munoz-Farre
Antonios Poulakakis-Daktylidis
Dilini M. Kothalawala
A. Rodriguez-Martinez
20
0
0
12 Jul 2023
BeaverTails: Towards Improved Safety Alignment of LLM via a
  Human-Preference Dataset
BeaverTails: Towards Improved Safety Alignment of LLM via a Human-Preference Dataset
Jiaming Ji
Mickel Liu
Juntao Dai
Xuehai Pan
Chi Zhang
Ce Bian
Chi Zhang
Ruiyang Sun
Yizhou Wang
Yaodong Yang
ALM
14
396
0
10 Jul 2023
Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain
Parameter-Efficient Fine-Tuning of LLaMA for the Clinical Domain
Aryo Pradipta Gema
Pasquale Minervini
Luke Daines
Tom Hope
Beatrice Alex
LM&MA
ALM
27
40
0
06 Jul 2023
Several categories of Large Language Models (LLMs): A Short Survey
Several categories of Large Language Models (LLMs): A Short Survey
Saurabh Pahune
Manoj Chandrasekharan
AILaw
17
14
0
05 Jul 2023
How far is Language Model from 100% Few-shot Named Entity Recognition in
  Medical Domain
How far is Language Model from 100% Few-shot Named Entity Recognition in Medical Domain
Mingchen Li
Rui Zhang
35
23
0
01 Jul 2023
SMILE: Evaluation and Domain Adaptation for Social Media Language
  Understanding
SMILE: Evaluation and Domain Adaptation for Social Media Language Understanding
Vasilisa Bashlovkina
Riley Matthews
Zhaobin Kuang
Simon Baumgartner
Michael Bendersky
25
4
0
30 Jun 2023
Transformers in Healthcare: A Survey
Transformers in Healthcare: A Survey
Subhash Nerella
S. Bandyopadhyay
Jiaqing Zhang
Miguel Contreras
Scott Siegel
...
Jessica Sena
B. Shickel
A. Bihorac
Kia Khezeli
Parisa Rashidi
MedIm
AI4CE
19
25
0
30 Jun 2023
Revealing the impact of social circumstances on the selection of cancer
  therapy through natural language processing of social work notes
Revealing the impact of social circumstances on the selection of cancer therapy through natural language processing of social work notes
Shenghuan Sun
T. Zack
C. Y. Williams
A. Butte
Madhumita Sushil
11
1
0
16 Jun 2023
ECGBERT: Understanding Hidden Language of ECGs with Self-Supervised
  Representation Learning
ECGBERT: Understanding Hidden Language of ECGs with Self-Supervised Representation Learning
Seokmin Choi
Sajad Mousavi
Phillip Si
Haben Yhdego
Fatemeh Khadem
Fatemeh Afghah
SSL
20
3
0
10 Jun 2023
A Review on Knowledge Graphs for Healthcare: Resources, Applications, and Promises
A Review on Knowledge Graphs for Healthcare: Resources, Applications, and Promises
Hejie Cui
Jiaying Lu
Shiyu Wang
Shiyu Wang
Wenjing Ma
...
Fei Wang
Carl Yang
Mengdi Huai
Fei Wang
Carl Yang
36
12
0
07 Jun 2023
Utilizing ChatGPT to Enhance Clinical Trial Enrollment
Utilizing ChatGPT to Enhance Clinical Trial Enrollment
Georgios Peikos
S. Symeonidis
Pranav Kasela
G. Pasi
LM&MA
14
12
0
03 Jun 2023
Domain Specialization as the Key to Make Large Language Models
  Disruptive: A Comprehensive Survey
Domain Specialization as the Key to Make Large Language Models Disruptive: A Comprehensive Survey
Chen Ling
Xujiang Zhao
Jiaying Lu
Chengyuan Deng
Can Zheng
...
Chris White
Quanquan Gu
Jian Pei
Carl Yang
Liang Zhao
ALM
16
126
0
30 May 2023
W-procer: Weighted Prototypical Contrastive Learning for Medical
  Few-Shot Named Entity Recognition
W-procer: Weighted Prototypical Contrastive Learning for Medical Few-Shot Named Entity Recognition
Mingchen Li
Yang Ye
Jeremy Yeung
Huixue Zhou
Huaiyuan Chu
Rui Zhang
34
2
0
29 May 2023
Training Data Extraction From Pre-trained Language Models: A Survey
Training Data Extraction From Pre-trained Language Models: A Survey
Shotaro Ishihara
24
46
0
25 May 2023
A Study of Generative Large Language Model for Medical Research and
  Healthcare
A Study of Generative Large Language Model for Medical Research and Healthcare
C.A.I. Peng
Xi Yang
Aokun Chen
Kaleb E. Smith
Nima M. Pournejatian
...
W. Hogan
E. Shenkman
Yi Guo
Jiang Bian
Yonghui Wu
LM&MA
ELM
AI4MH
140
240
0
22 May 2023
DrBERT: A Robust Pre-trained Model in French for Biomedical and Clinical
  domains
DrBERT: A Robust Pre-trained Model in French for Biomedical and Clinical domains
Yanis Labrak
Adrien Bazoge
Richard Dufour
Mickael Rouvier
Emmanuel Morin
B. Daille
P. Gourraud
LM&MA
13
53
0
03 Apr 2023
Extracting Thyroid Nodules Characteristics from Ultrasound Reports Using
  Transformer-based Natural Language Processing Methods
Extracting Thyroid Nodules Characteristics from Ultrasound Reports Using Transformer-based Natural Language Processing Methods
Aman Pathak
Zehao Yu
Daniel Paredes
Elio Monsour
Andrea Ortiz Rocha
J. Brito
N. Ospina
Yonghui Wu
MedIm
14
6
0
31 Mar 2023
Identifying Symptoms of Delirium from Clinical Narratives Using Natural
  Language Processing
Identifying Symptoms of Delirium from Clinical Narratives Using Natural Language Processing
Aokun Chen
Daniel Paredes
Zehao Yu
Xiwei Lou
Roberta Brunson
...
Sara Ser
M. Prosperi
Jiang Bian
Ragnhildur I. Bjarnadottir
Yonghui Wu
9
0
0
31 Mar 2023
GPT-4 can pass the Korean National Licensing Examination for Korean
  Medicine Doctors
GPT-4 can pass the Korean National Licensing Examination for Korean Medicine Doctors
Dongyeop Jang
Tae-Rim Yun
Choong-Yeol Lee
Young-Kyu Kwon
Chang-Eop Kim
ELM
LM&MA
19
26
0
31 Mar 2023
Large AI Models in Health Informatics: Applications, Challenges, and the
  Future
Large AI Models in Health Informatics: Applications, Challenges, and the Future
Jianing Qiu
Lin Li
Jiankai Sun
Jiachuan Peng
Peilun Shi
...
Bo Xiao
Wu Yuan
Ningli Wang
Dong Xu
Benny P. L. Lo
AI4MH
LM&MA
38
125
0
21 Mar 2023
Clinical Concept and Relation Extraction Using Prompt-based Machine
  Reading Comprehension
Clinical Concept and Relation Extraction Using Prompt-based Machine Reading Comprehension
C.A.I. Peng
Xi Yang
Zehao Yu
Jiang Bian
W. Hogan
Yonghui Wu
114
23
0
14 Mar 2023
Contextualized Medication Information Extraction Using Transformer-based
  Deep Learning Architectures
Contextualized Medication Information Extraction Using Transformer-based Deep Learning Architectures
Aokun Chen
Zehao Yu
Xi Yang
Yi Guo
Jiang Bian
Yonghui Wu
16
21
0
14 Mar 2023
Do We Still Need Clinical Language Models?
Do We Still Need Clinical Language Models?
Eric P. Lehman
Evan Hernandez
Diwakar Mahajan
Jonas Wulff
Micah J. Smith
Zachary M. Ziegler
Daniel Nadler
Peter Szolovits
Alistair E. W. Johnson
Emily Alsentzer
LM&MA
AI4MH
14
132
0
16 Feb 2023
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