Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation

18 March 2016

Konstantinos Kamnitsas

Papers citing "Efficient Multi-Scale 3D CNN with Fully Connected CRF for Accurate Brain Lesion Segmentation"

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Title
TricycleGAN: Unsupervised Image Synthesis and Segmentation Based on Shape Priors Umaseh Sivanesan Luis H. Braga R. Sonnadara Kiret Dhindsa GAN MedIm 21 2 0 04 Feb 2021
Few-shot Learning for CT Scan based COVID-19 Diagnosis Yifan Jiang Han Chen D. Han Hanseok Ko OOD 26 16 0 01 Feb 2021
Automatic Segmentation of Gross Target Volume of Nasopharynx Cancer using Ensemble of Multiscale Deep Neural Networks with Spatial Attention Haochen Mei Wenhui Lei Ran Gu Shan Ye Zhengwentai Sun Shichuan Zhang Guotai Wang 31 23 0 27 Jan 2021
Vessel-CAPTCHA: an efficient learning framework for vessel annotation and segmentation Vien Ngoc Dang Francesco Galati Rosa Cortese G. Giacomo Viola Marconeto Pratek Mathur Karim Lekadir Marco Lorenzi F. Prados Maria A. Zuluaga MedIm 25 35 0 22 Jan 2021
A survey on shape-constraint deep learning for medical image segmentation Simon Bohlender Ilkay Oksuz Anirban Mukhopadhyay 3DV 36 34 0 19 Jan 2021
Meningioma segmentation in T1-weighted MRI leveraging global context and attention mechanisms D. Bouget André Pedersen Sayied Abdol Mohieb Hosainey O. Solheim Ingerid Reinertsen 50 24 0 19 Jan 2021
Bladder segmentation based on deep learning approaches: current limitations and lessons M. Bandyk D. Gopireddy C. Lall K. Balaji Jose Dolz 16 0 0 16 Jan 2021
MRI Images, Brain Lesions and Deep Learning D. Castillo Vasudevan Lakshminarayanan M. Rodríguez-Álvarez OOD 30 3 0 13 Jan 2021
Brain Tumor Segmentation and Survival Prediction using Automatic Hard mining in 3D CNN Architecture V. K. Anand Sanjeev Grampurohit P. Aurangabadkar Avinash Kori Mahendra Khened R. S. Bhat Ganapathy Krishnamurthi 19 29 0 05 Jan 2021
Combining unsupervised and supervised learning for predicting the final stroke lesion Adriano Pinto Sérgio Pereira Raphael Meier Roland Wiest Victor Alves M. Reyes Carlos Alberto Silva 11 26 0 02 Jan 2021
H2NF-Net for Brain Tumor Segmentation using Multimodal MR Imaging: 2nd Place Solution to BraTS Challenge 2020 Segmentation Task Haozhe Jia Weidong (Tom) Cai Heng-Chiao Huang Yong-quan Xia 27 45 0 30 Dec 2020
MRI brain tumor segmentation and uncertainty estimation using 3D-UNet architectures Laura Mora Ballestar Verónica Vilaplana 24 36 0 30 Dec 2020
Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast Juan Eugenio Iglesias Benjamin Billot Yael Balbastre A. Tabari J. Conklin Daniel C. Alexander Polina Golland B. Edlow Bruce Fischl 42 101 0 24 Dec 2020
A Multi-View Dynamic Fusion Framework: How to Improve the Multimodal Brain Tumor Segmentation from Multi-Views? Yi Ding Wei Zheng Guozheng Wu Ji Geng Mingsheng Cao Zhiguang Qin 19 1 0 21 Dec 2020
Atlas-ISTN: Joint Segmentation, Registration and Atlas Construction with Image-and-Spatial Transformer Networks Matthew Sinclair A. Schuh K. Hahn K. Petersen Ying Bai James Batten M. Schaap Ben Glocker 25 30 0 18 Dec 2020
DeepLesionBrain: Towards a broader deep-learning generalization for multiple sclerosis lesion segmentation R. A. Kamraoui Vinh-Thong Ta T. Tourdias Boris Mansencal J. V. Manjón Pierrick Coupé OOD 31 50 0 14 Dec 2020
Learning Hybrid Representations for Automatic 3D Vessel Centerline Extraction Jiafa He Changzai Pan Can Yang Ming Zhang Yang Wang Xiaowei Zhou Yizhou Yu 3DPC 17 25 0 14 Dec 2020
Multiple Sclerosis Lesion Segmentation -- A Survey of Supervised CNN-Based Methods H. Zhang I. Oguz 30 14 0 12 Dec 2020
HI-Net: Hyperdense Inception 3D UNet for Brain Tumor Segmentation Saqib Qamar Parvez Ahmad Linlin Shen 25 26 0 12 Dec 2020
Uncertainty-driven refinement of tumor-core segmentation using 3D-to-2D networks with label uncertainty Richard McKinley M. Rebsamen Katrin Daetwyler Raphael Meier Piotr Radojewski Roland Wiest 3DV 21 26 0 11 Dec 2020
Learning Tubule-Sensitive CNNs for Pulmonary Airway and Artery-Vein Segmentation in CT Yulei Qin Hao Zheng Yun Gu Xiaolin Huang Jie Yang Lihui Wang Feng Yao Y. Zhu Guang-Zhong Yang 11 74 0 10 Dec 2020
Statistical inference of the inter-sample Dice distribution for discriminative CNN brain lesion segmentation models Kevin Raina 14 1 0 04 Dec 2020
A Multi-task Contextual Atrous Residual Network for Brain Tumor Detection & Segmentation Ngan Le Kashu Yamazaki Dat T. Truong Kha Gia Quach Marios Savvides MedIm 28 18 0 03 Dec 2020
Reducing Textural Bias Improves Robustness of Deep Segmentation Models Seoin Chai Daniel Rueckert Ahmed E. Fetit OOD 12 2 0 30 Nov 2020
Modelling brain lesion volume in patches with CNN-based Poisson Regression Kevin Raina MedIm 6 0 0 26 Nov 2020
Explainable-by-design Semi-Supervised Representation Learning for COVID-19 Diagnosis from CT Imaging Abel Díaz Berenguer Hichem Sahli Boris Joukovsky Maryna Kvasnytsia Ine Dirks ... P. Meunier S. Gryspeerdt K. Smet B. Jansen Jef Vandemeulebroucke 23 8 0 23 Nov 2020
Automatic Brain Tumor Segmentation with Scale Attention Network Yading Yuan 33 32 0 06 Nov 2020
Deep Learning in Computer-Aided Diagnosis and Treatment of Tumors: A Survey Dan Zhao Guizhi Xu Xu Zhenghua Thomas Lukasiewicz Minmin Xue Zhigang Fu OOD 11 2 0 02 Nov 2020
Brain Tumor Segmentation Network Using Attention-based Fusion and Spatial Relationship Constraint Chenyu Liu Wangbin Ding Lei Li Zhen Zhang Chenhao Pei Liqin Huang Xiahai Zhuang 25 26 0 29 Oct 2020
Optimization for Medical Image Segmentation: Theory and Practice when evaluating with Dice Score or Jaccard Index Tom Eelbode J. Bertels Maxim Berman Dirk Vandermeulen F. Maes R. Bisschops Matthew B. Blaschko 30 255 0 26 Oct 2020
Context Aware 3D UNet for Brain Tumor Segmentation Parvez Ahmad Saqib Qamar Linlin Shen Adnan Saeed SSeg 21 35 0 25 Oct 2020
Tissue characterization based on the analysis on i3DUS data for diagnosis support in neurosurgery Moucheng Xu 13 0 0 24 Oct 2020
Weakly-supervised Learning For Catheter Segmentation in 3D Frustum Ultrasound Hongxu Yang Caifeng Shan Alexander F. Kolen Peter H. N. de With 16 13 0 19 Oct 2020
3D Segmentation Networks for Excessive Numbers of Classes: Distinct Bone Segmentation in Upper Bodies Eva Schnider Antal Huck-Horváth G. Rauter A. Zam M. Müller-Gerbl Philippe C. Cattin 19 10 0 14 Oct 2020
Fast meningioma segmentation in T1-weighted MRI volumes using a lightweight 3D deep learning architecture D. Bouget André Pedersen Sayied Abdol Mohieb Hosainey J. Vanel O. Solheim Ingerid Reinertsen 27 15 0 14 Oct 2020
Medical Image Harmonization Using Deep Learning Based Canonical Mapping: Toward Robust and Generalizable Learning in Imaging V. Bashyam J. Doshi G. Erus D. Srinivasan Ahmed Abdulkadir ... R. Nick David A. Wolk H. Shou I. Nasrallah Christos Davatzikos MedIm 19 17 0 11 Oct 2020
Physical invariance in neural networks for subgrid-scale scalar flux modeling Hugo Frezat G. Balarac Julien Le Sommer Ronan Fablet Redouane Lguensat AI4CE 37 44 0 09 Oct 2020
Explaining Clinical Decision Support Systems in Medical Imaging using Cycle-Consistent Activation Maximization Alexander Katzmann O. Taubmann Stephen Ahmad Alexander Muhlberg M. Sühling H. Groß MedIm 13 19 0 09 Oct 2020
Memory-efficient GAN-based Domain Translation of High Resolution 3D Medical Images H. Uzunova J. Ehrhardt Heinz Handels MedIm 16 45 0 06 Oct 2020
AIFNet: Automatic Vascular Function Estimation for Perfusion Analysis Using Deep Learning Ezequiel de la Rosa Diana Sima Bjoern H. Menze Jan S. Kirschke D. Robben 30 13 0 04 Oct 2020
Towards Cross-modality Medical Image Segmentation with Online Mutual Knowledge Distillation Kang Li Lequan Yu Shujun Wang Pheng-Ann Heng 36 103 0 04 Oct 2020
Multi-Resolution 3D Convolutional Neural Networks for Automatic Coronary Centerline Extraction in Cardiac CT Angiography Scans Zohaib Salahuddin Matthias Lenga H. Nickisch 3DPC 6 14 0 02 Oct 2020
Realistic Image Normalization for Multi-Domain Segmentation Pierre-Luc Delisle Benoit Anctil-Robitaille Christian Desrosiers H. Lombaert 36 17 0 29 Sep 2020
Enhancing MRI Brain Tumor Segmentation with an Additional Classification Network Hieu T. Nguyen T. Le T. Nguyen N. T. Nguyen 15 20 0 25 Sep 2020
Brain Tumor Segmentation using 3D-CNNs with Uncertainty Estimation Laura Mora Ballestar Verónica Vilaplana 26 8 0 24 Sep 2020
CA-Net: Comprehensive Attention Convolutional Neural Networks for Explainable Medical Image Segmentation Ran Gu Guotai Wang Tao Song Rui Huang Michael Aertsen Jan Deprest Sébastien Ourselin Tom Kamiel Magda Vercauteren Shaoting Zhang SSeg 36 457 0 22 Sep 2020
Radiologist-level Performance by Using Deep Learning for Segmentation of Breast Cancers on MRI Scans Lukas Hirsch Yu Huang Shaojun Luo Carolina Rossi Saccarelli Roberto Lo Gullo ... Pierre Elnajjar Elizabeth A. Morris H. Makse Lucas C. Parra Elizabeth J. Sutton MedIm 17 32 0 21 Sep 2020
Robust Aggregation for Adaptive Privacy Preserving Federated Learning in Healthcare Matei Grama M. Mușat Luis Muñoz-González Jonathan Passerat-Palmbach Daniel Rueckert A. Alansary OOD FedML 14 45 0 17 Sep 2020
Multi-structure bone segmentation in pediatric MR images with combined regularization from shape priors and adversarial network Arnaud Boutillon Bhushan S Borotikar Valérie Burdin Pierre-Henri Conze MedIm 23 18 0 15 Sep 2020
EfficientSeg: An Efficient Semantic Segmentation Network V. B. Yesilkaynak Y. Sahin Gözde B. Ünal SSeg 25 7 0 14 Sep 2020