Generalised Dice overlap as a deep learning loss function for highly unbalanced segmentations

11 July 2017

Carole H Sudre

Wenqi Li

Tom Kamiel Magda Vercauteren

Sébastien Ourselin

M. Jorge Cardoso

SSeg

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Papers citing "Generalised Dice overlap as a deep learning loss function for highly unbalanced segmentations"

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SuperMask: Generating High-resolution object masks from multi-view, unaligned low-resolution MRIs Han Gu Hongyu Hè R. Colglazier Jordan Axelrod Robert French Maciej A. Mazurowski 18 0 0 13 Mar 2023
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ISBNet: a 3D Point Cloud Instance Segmentation Network with Instance-aware Sampling and Box-aware Dynamic Convolution T.D. Ngo Binh-Son Hua Khoi Duc Minh Nguyen 3DPC ISeg 15 44 0 01 Mar 2023
Towards more precise automatic analysis: a comprehensive survey of deep learning-based multi-organ segmentation Xiaoyu Liu Linhao Qu Ziyue Xie Jiayue Zhao Yonghong Shi Zhijian Song 42 7 0 01 Mar 2023
Joint Learning of Blind Super-Resolution and Crack Segmentation for Realistic Degraded Images Yuki Kondo Norimichi Ukita SupR 24 8 0 24 Feb 2023
Jaccard Metric Losses: Optimizing the Jaccard Index with Soft Labels Zifu Wang Xuefei Ning Matthew B. Blaschko VLM 35 12 0 11 Feb 2023
Tackling Bias in the Dice Similarity Coefficient: Introducing nDSC for White Matter Lesion Segmentation Vatsal Raina Nataliia Molchanova Mara Graziani A. Malinin Henning Muller Meritxell Bach Cuadra Mark Gales 32 10 0 10 Feb 2023
An Efficient Instance Segmentation Approach for Extracting Fission Gas Bubbles on U-10Zr Annular Fuel Shoukun Sun Fei Xu Lu Cai D. Salvato Fidelma Dilemma L. Capriotti Min Xian Tiankai Yao 23 0 0 08 Feb 2023
A Generalized Surface Loss for Reducing the Hausdorff Distance in Medical Imaging Segmentation A. Celaya B. Rivière David T. Fuentes MedIm 33 8 0 08 Feb 2023
Multi-organ segmentation: a progressive exploration of learning paradigms under scarce annotation Shiman Li Haoran Wang Yucong Meng Chenxi Zhang Zhijian Song 45 6 0 07 Feb 2023
Detecting Building Changes with Off-Nadir Aerial Images Chao Pang Jiang Wu Jian Ding Can Song Guisong Xia 27 30 0 26 Jan 2023
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Vision Transformers Are Good Mask Auto-Labelers Shiyi Lan Xitong Yang Zhiding Yu Zuxuan Wu J. Álvarez Anima Anandkumar ISeg ViT MedIm 24 19 0 10 Jan 2023
RLAS-BIABC: A Reinforcement Learning-Based Answer Selection Using the BERT Model Boosted by an Improved ABC Algorithm Hamid Gharagozlou J. Mohammadzadeh A. Bastanfard S. S. Ghidary 16 34 0 07 Jan 2023
MSCDA: Multi-level Semantic-guided Contrast Improves Unsupervised Domain Adaptation for Breast MRI Segmentation in Small Datasets Sheng Kuang Henry C. Woodruff R. Granzier T. Nijnatten M. Lobbes M. Smidt Philippe Lambin S. Mehrkanoon 30 16 0 04 Jan 2023
Industrial Scene Change Detection using Deep Convolutional Neural Networks Ali Atghaei Ehsan Rahnama Kiavash Azimi Hassan Shahbazi 29 1 0 29 Dec 2022
Learning a Fast 3D Spectral Approach to Object Segmentation and Tracking over Space and Time Elena Burceanu Marius Leordeanu VOS 34 0 0 15 Dec 2022
RainUNet for Super-Resolution Rain Movie Prediction under Spatio-temporal Shifts Jinyoung Park Minseok Son Seungju Cho Inyoung Lee Changick Kim 13 3 0 07 Dec 2022
Domain Adaptive Scene Text Detection via Subcategorization Zichen Tian Chuhui Xue Jingyi Zhang Shijian Lu 28 4 0 01 Dec 2022
Mind the Gap: Scanner-induced domain shifts pose challenges for representation learning in histopathology Frauke Wilm Marco Fragoso C. Bertram N. Stathonikos Mathias Öttl Jingna Qiu R. Klopfleisch Andreas Maier Marc Aubreville Katharina Breininger OOD MedIm 26 4 0 29 Nov 2022
Performance evaluation of deep segmentation models for Contrails detection Akshat Bhandari Sriya Rallabandi Sanchit Singhal Aditya Kasliwal Pratinav Seth 38 0 0 27 Nov 2022
Medical Image Segmentation Review: The success of U-Net Reza Azad Ehsan Khodapanah Aghdam Amelie Rauland Yiwei Jia Atlas Haddadi Avval Afshin Bozorgpour Sanaz Karimijafarbigloo Joseph Paul Cohen Ehsan Adeli Dorit Merhof SSeg 28 268 0 27 Nov 2022
DoubleU-NetPlus: A Novel Attention and Context Guided Dual U-Net with Multi-Scale Residual Feature Fusion Network for Semantic Segmentation of Medical Images Md. Rayhan Ahmed Adnan Ferdous Ashrafi R. Ahmed Swakkhar Shatabda A. Muzahidul Islam Salekul Islam SSeg 35 20 0 25 Nov 2022
Synthetic Data for Semantic Image Segmentation of Imagery of Unmanned Spacecraft William S. Armstrong Spencer Drakontaidis Nicholas Lui 22 3 0 22 Nov 2022
Improved HER2 Tumor Segmentation with Subtype Balancing using Deep Generative Networks Mathias Öttl Jana Mönius M. Rübner C. Geppert Jingna Qiu ... Matthias W. Beckmann Peter Fasching Andreas Maier R. Erber Katharina Breininger DiffM MedIm 29 3 0 11 Nov 2022
Harmonizing output imbalance for defect segmentation on extremely-imbalanced photovoltaic module cells images Jianye Yi Xiaopin Zhong Weixiang Liu Zongze Wu Yuanlong Deng Zhengguang Wu 34 0 0 10 Nov 2022
Theoretical analysis and experimental validation of volume bias of soft Dice optimized segmentation maps in the context of inherent uncertainty J. Bertels D. Robben Dirk Vandermeulen P. Suetens 30 19 0 08 Nov 2022
MyoPS-Net: Myocardial Pathology Segmentation with Flexible Combination of Multi-Sequence CMR Images Junyi Qiu Lei Li Sihan Wang Kecheng Zhang Yinyin Chen Shan Yang Xiahai Zhuang 23 28 0 06 Nov 2022
MONAI: An open-source framework for deep learning in healthcare M. Jorge Cardoso Wenqi Li Richard Brown Nic Ma E. Kerfoot ... Klaus H. Maier-Hein S. Aylward Prerna Dogra Sebastien Ourselin Andrew Feng 60 483 0 04 Nov 2022
ImageCAS: A Large-Scale Dataset and Benchmark for Coronary Artery Segmentation based on Computed Tomography Angiography Images An Zeng Chunbiao Wu Meiping Huang Jian Zhuang Shanshan Bi ... Tianchen Wang Yiyu Shi Xuelong Li Guisen Lin Xiaowei Xu 28 58 0 03 Nov 2022
IB-U-Nets: Improving medical image segmentation tasks with 3D Inductive Biased kernels Shrajan Bhandary Z. Babaiee D. Kostyszyn T. Fechter C. Zamboglou Anca-Ligia Grosu Radu Grosu 40 1 0 28 Oct 2022
How precise are performance estimates for typical medical image segmentation tasks? Rosana El Jurdi O. Colliot UQCV 27 6 0 26 Oct 2022
Bag All You Need: Learning a Generalizable Bagging Strategy for Heterogeneous Objects Arpit Bahety Shreeya Jain Huy Ha Nathalie Hager Benjamin Burchfiel Eric A. Cousineau S. Feng Shuran Song 30 16 0 18 Oct 2022
Cutting-Splicing data augmentation: A novel technology for medical image segmentation Lianting Hu Huiying Liang Jiajie Tang Xin Li Li Huang Long Lu 21 1 0 17 Oct 2022
Analysis of the performance of U-Net neural networks for the segmentation of living cells André O. Franccani SSeg 16 2 0 04 Oct 2022
Contour-Aware Equipotential Learning for Semantic Segmentation Xu-Cheng Yin Dongbo Min Yuchi Huo Sung-eui Yoon 50 9 0 01 Oct 2022
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Did You Get What You Paid For? Rethinking Annotation Cost of Deep Learning Based Computer Aided Detection in Chest Radiographs Tae Soo Kim Geonwoon Jang Sanghyup Lee Thijs Kooi 29 7 0 30 Sep 2022
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Partial annotations for the segmentation of large structures with low annotation cost Bella Specktor-Fadida Daphna Link-Sourani Liat Ben Sira Elka Miller D. Ben Bashat Leo Joskowicz 30 2 0 25 Sep 2022
Self-adversarial Multi-scale Contrastive Learning for Semantic Segmentation of Thermal Facial Images Jitesh Joshi N. Bianchi-Berthouze Youngjun Cho 19 7 0 21 Sep 2022
On the Optimal Combination of Cross-Entropy and Soft Dice Losses for Lesion Segmentation with Out-of-Distribution Robustness Adrian Galdran G. Carneiro M. A. G. Ballester OOD 26 17 0 13 Sep 2022
Prototypical few-shot segmentation for cross-institution male pelvic structures with spatial registration Yiwen Li Yunguan Fu Iani J. M. B. Gayo Qianye Yang Zhe Min ... Matthew J. Clarkson Henkjan J. Huisman D. Barratt V. Prisacariu Yipeng Hu 19 19 0 12 Sep 2022
Inversion of Time-Lapse Surface Gravity Data for Detection of 3D CO $_2$ Plumes via Deep Learning A. Celaya B. Denel Yen Sun Mauricio Araya-Polo A. Price 3DPC 34 10 0 06 Sep 2022
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