BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

50 / 455 papers shown

Title
KDH-MLTC: Knowledge Distillation for Healthcare Multi-Label Text Classification Hajar Sakai Sarah Lam VLM 38 0 0 12 May 2025
HAMLET: Healthcare-focused Adaptive Multilingual Learning Embedding-based Topic Modeling Hajar Sakai Sarah Lam 34 0 0 12 May 2025
CheXLearner: Text-Guided Fine-Grained Representation Learning for Progression Detection Y. Wang Junwen Duan Xinyu Li Jianxin Wang MedIm 29 0 0 11 May 2025
CellVerse: Do Large Language Models Really Understand Cell Biology? Fan Zhang Tianyu Liu Zhihong Zhu Hao Wu H. Wang Donghao Zhou Yefeng Zheng Kun Wang X. Wu Pheng-Ann Heng ELM 36 0 0 09 May 2025
CDE-Mapper: Using Retrieval-Augmented Language Models for Linking Clinical Data Elements to Controlled Vocabularies Komal Gilani Marlo Verket Christof Peters Michel Dumontier Hans-Peter Brunner-La Rocca V. Urovi 35 0 0 07 May 2025
Knowledge Augmented Complex Problem Solving with Large Language Models: A Survey Da Zheng Lun Du Junwei Su Yuchen Tian Yuqi Zhu Jintian Zhang Lanning Wei Ningyu Zhang H. Chen LRM 61 0 0 06 May 2025
An Automated LLM-based Pipeline for Asset-Level Database Creation to Assess Deforestation Impact Avanija Menon Ovidiu Serban 29 0 0 05 May 2025
Retrieval-augmented in-context learning for multimodal large language models in disease classification Zaifu Zhan Shuang Zhou Xiaoshan Zhou Yongkang Xiao J. Wang Jiawen Deng He Zhu Yu Hou Rui Zhang 44 0 0 04 May 2025
Knowledge-augmented Pre-trained Language Models for Biomedical Relation Extraction Mario Sanger Ulf Leser 45 0 0 01 May 2025
AdCare-VLM: Leveraging Large Vision Language Model (LVLM) to Monitor Long-Term Medication Adherence and Care Md Asaduzzaman Jabin Hanqi Jiang Y. Li Patrick Kaggwa Eugene Douglass Juliet N. Sekandi Tianming Liu LM&MA 76 0 0 01 May 2025
Revisiting the MIMIC-IV Benchmark: Experiments Using Language Models for Electronic Health Records Jesus Lovon Thouria Ben-Haddi Jules Di Scala José G. Moreno L. Tamine 60 2 0 29 Apr 2025
Llama-3.1-FoundationAI-SecurityLLM-Base-8B Technical Report Paul Kassianik Baturay Saglam Alexander Chen Blaine Nelson Anu Vellore ... Hyrum Anderson Kojin Oshiba Omar Santos Yaron Singer Amin Karbasi PILM 61 0 0 28 Apr 2025
Hallucinations and Key Information Extraction in Medical Texts: A Comprehensive Assessment of Open-Source Large Language Models Anindya Bijoy Das Shibbir Ahmed Shahnewaz Karim Sakib HILM LM&MA 57 0 0 27 Apr 2025
Advancing Scientific Text Classification: Fine-Tuned Models with Dataset Expansion and Hard-Voting Z. R. K. Rostam Gábor Kertész 24 0 0 26 Apr 2025
PatientDx: Merging Large Language Models for Protecting Data-Privacy in Healthcare José G. Moreno Jesus Lovon M'Rick Robin-Charlet Christine Damase-Michel L. Tamine MoMe LM&MA 53 0 0 24 Apr 2025
RAGO: Systematic Performance Optimization for Retrieval-Augmented Generation Serving Wenqi Jiang Suvinay Subramanian Cat Graves Gustavo Alonso Amir Yazdanbakhsh Vidushi Dadu 47 6 0 18 Mar 2025
Striving for Simplicity: Simple Yet Effective Prior-Aware Pseudo-Labeling for Semi-Supervised Ultrasound Image Segmentation Yaxiong Chen Yujie Wang Zixuan Zheng Jingliang Hu Yilei Shi Shengwu Xiong Xiao Xiang Zhu Lichao Mou 52 1 0 18 Mar 2025
Multi-Modal Foundation Models for Computational Pathology: A Survey Dong Li Guihong Wan Xintao Wu Xinyu Wu Xiaohui Chen Yi He Christine G. Lian Peter K. Sorger Yevgeniy R. Semenov Chen Zhao MedIm 46 0 0 12 Mar 2025
Enhanced Multi-Tuple Extraction for Alloys: Integrating Pointer Networks and Augmented Attention Mengzhe Hei Zhouran Zhang Qingbao Liu Yan Pan Xiang Zhao Yongqian Peng Yicong Ye Xin Zhang Shuxin Bai 43 0 0 10 Mar 2025
ExKG-LLM: Leveraging Large Language Models for Automated Expansion of Cognitive Neuroscience Knowledge Graphs Ali Sarabadani Kheirolah Rahsepar Fard Hamid Dalvand 60 0 0 09 Mar 2025
An Empirical Study of Causal Relation Extraction Transfer: Design and Data Sydney Anuyah Jack Vanschaik Palak Jain Sawyer Lehman Sunandan Chakraborty 44 0 0 08 Mar 2025
Leveraging Semantic Type Dependencies for Clinical Named Entity Recognition Linh Le Guido Zuccon Gianluca Demartini Genghong Zhao Xia Zhang 50 1 0 07 Mar 2025
Distilled Prompt Learning for Incomplete Multimodal Survival Prediction Yingxue Xu Fengtao Zhou Chenyu Zhao Yihui Wang Can Yang Hao Chen VLM OffRL 52 0 0 03 Mar 2025
Citrus: Leveraging Expert Cognitive Pathways in a Medical Language Model for Advanced Medical Decision Support G. Wang Minyu Gao Shuai Yang Ya Zhang Lizhi He ... Yexuan Zhang Wanyue Li Lu Chen Jintao Fei Xin Li 107 1 0 25 Feb 2025
Tabular Embeddings for Tables with Bi-Dimensional Hierarchical Metadata and Nesting Gyanendra Shrestha Chutain Jiang Sai Akula Vivek Yannam Anna Pyayt Michael Gubanov LMTD 89 0 0 20 Feb 2025
Assessing the Impact of the Quality of Textual Data on Feature Representation and Machine Learning Models Tabinda Sarwar Antonio Jose Jimeno Yepes Lawrence Cavedon 65 0 0 12 Feb 2025
KARMA: Leveraging Multi-Agent LLMs for Automated Knowledge Graph Enrichment Yuxing Lu Jinzhuo Wang 38 1 0 10 Feb 2025
Privacy-Preserving Dataset Combination Keren Fuentes Mimee Xu Irene Chen 36 0 0 09 Feb 2025
Enhancing Health Information Retrieval with RAG by Prioritizing Topical Relevance and Factual Accuracy Rishabh Uapadhyay Marco Viviani 67 0 0 07 Feb 2025
TMI-CLNet: Triple-Modal Interaction Network for Chronic Liver Disease Prognosis From Imaging, Clinical, and Radiomic Data Fusion Linglong Wu Xuhao Shan Ruiquan Ge Ruoyu Liang Chi Zhang Yonghong Li Ahmed Elazab Huoling Luo Yunbi Liu Changmiao Wang 54 0 0 02 Feb 2025
MEL: Legal Spanish Language Model David Betancur Sánchez Nuria Aldama García Á. Jiménez Marta Guerrero Nieto Patricia Marsà Morales Nicolás Serrano Salas Carlos García Hernán Pablo Haya Coll Elena Montiel Ponsoda Pablo Calleja Ibáñez 39 0 0 28 Jan 2025
Scaling Large Vision-Language Models for Enhanced Multimodal Comprehension In Biomedical Image Analysis Robinson Umeike N. Getty Fangfang Xia Rick L. Stevens 29 2 0 28 Jan 2025
A Survey of Large Language Models for Healthcare: from Data, Technology, and Applications to Accountability and Ethics Kai He Rui Mao Qika Lin Yucheng Ruan Xiang Lan Mengling Feng Erik Cambria LM&MA AILaw 93 153 0 28 Jan 2025
News Without Borders: Domain Adaptation of Multilingual Sentence Embeddings for Cross-lingual News Recommendation Andreea Iana Fabian David Schmidt Goran Glavas Heiko Paulheim 65 3 0 20 Jan 2025
Neuradicon: operational representation learning of neuroimaging reports Henry Watkins Robert J. Gray Adam Julius Y. Mah W. H. Pinaya ... Jorge M. Cardoso Sebastien Ourselin Geraint Rees Rolf Jaeger P. Nachev MedIm 129 1 0 20 Jan 2025
A Comprehensive Survey of Foundation Models in Medicine Wasif Khan Seowung Leem Kyle B. See Joshua K. Wong Shaoting Zhang R. Fang AI4CE LM&MA VLM 105 18 0 17 Jan 2025
Natural Language-Assisted Multi-modal Medication Recommendation Jie Tan Yu Rong Kangfei Zhao Tian Bian Tingyang Xu Junzhou Huang Hong Cheng H. Meng 51 1 0 13 Jan 2025
STAYKATE: Hybrid In-Context Example Selection Combining Representativeness Sampling and Retrieval-based Approach -- A Case Study on Science Domains Chencheng Zhu Kazutaka Shimada Tomoki Taniguchi Tomoko Ohkuma 33 0 0 31 Dec 2024
Controlling for Unobserved Confounding with Large Language Model Classification of Patient Smoking Status Samuel Lee Zach Wood-Doughty CML 45 0 0 05 Nov 2024
TriG-NER: Triplet-Grid Framework for Discontinuous Named Entity Recognition R. Cabral Soyeon Caren Han Areej Alhassan R. Batista-Navarro Goran Nenadic Josiah Poon 31 0 0 04 Nov 2024
Generative AI-Powered Plugin for Robust Federated Learning in Heterogeneous IoT Networks Youngjoon Lee J. Gong Joonhyuk Kang 47 0 0 31 Oct 2024
Efficient Bilinear Attention-based Fusion for Medical Visual Question Answering Zhilin Zhang Jie Wang Zhanghao Qin Ruiqi Zhu Xiaoliang Gong MedIm 39 0 0 28 Oct 2024
Medical-GAT: Cancer Document Classification Leveraging Graph-Based Residual Network for Scenarios with Limited Data Elias Hossain Tasfia Nuzhat Shamsul Masum Shahram Rahimi Sudip Mittal 20 0 0 19 Oct 2024
Enabling Scalable Evaluation of Bias Patterns in Medical LLMs Hamed Fayyaz Raphael Poulain Rahmatollah Beheshti 34 1 0 18 Oct 2024
MedINST: Meta Dataset of Biomedical Instructions Wenhan Han Meng Fang Zihan Zhang Yu Yin Zirui Song Ling-Hao Chen Mykola Pechenizkiy Qingyu Chen LM&MA 33 1 0 17 Oct 2024
Retrieval-Reasoning Large Language Model-based Synthetic Clinical Trial Generation Z. Xu Fang Wu Tianfan Fu Yue Zhao SyDa LRM 45 0 0 16 Oct 2024
Disease Entity Recognition and Normalization is Improved with Large Language Model Derived Synthetic Normalized Mentions Kuleen Sasse Shinjitha Vadlakonda Richard Kennedy J. D. Osborne AI4CE 29 0 0 10 Oct 2024
Contextual Breach: Assessing the Robustness of Transformer-based QA Models Asir Saadat Nahian Ibn Asad Md Farhan Ishmam AAML 38 0 0 17 Sep 2024
Generating Synthetic Free-text Medical Records with Low Re-identification Risk using Masked Language Modeling Samuel Belkadi Libo Ren Nicolo Micheletti Lifeng Han Goran Nenadic SyDa MedIm 32 0 0 15 Sep 2024
AlpaPICO: Extraction of PICO Frames from Clinical Trial Documents Using LLMs Madhusudan Ghosh Shrimon Mukherjee Asmit Ganguly Partha Basuchowdhuri S. Naskar Debasis Ganguly 31 7 0 15 Sep 2024