Papers citing 'BioBERT: a pre-trained biomedical language representation model for biomedical text mining'

Title
Transferability of Natural Language Inference to Biomedical Question Answering Minbyul Jeong Mujeen Sung Gangwoo Kim Donghyeon Kim Wonjin Yoon J. Yoo Jaewoo Kang 378 45 0 01 Jul 2020
SE3M: A Model for Software Effort Estimation Using Pre-trained Embedding Models E. M. D. B. Fávero Dalcimar Casanova Andrey R. Pimentel 92 17 0 30 Jun 2020
Classification of cancer pathology reports: a large-scale comparative study S. Martina L. Ventura P. Frasconi 157 12 0 29 Jun 2020
Answering Questions on COVID-19 in Real-Time Jinhyuk Lee Sean S. Yi Minbyul Jeong Mujeen Sung Wonjin Yoon Yonghwa Choi Miyoung Ko Jaewoo Kang 219 43 0 29 Jun 2020
Automating Text Naturalness Evaluation of NLG Systems Erion cCano Ondrej Bojar 86 0 0 23 Jun 2020
A Deep Learning Pipeline for Patient Diagnosis Prediction Using Electronic Health Records Leopold Franz Yash Raj Shrestha B. Paudel OOD 132 26 0 23 Jun 2020
NLPContributions: An Annotation Scheme for Machine Reading of Scholarly Contributions in Natural Language Processing Literature Jennifer D'Souza Sören Auer 191 19 0 23 Jun 2020
Clinical Predictive Keyboard using Statistical and Neural Language Modeling John Pavlopoulos P. Papapetrou 97 1 0 22 Jun 2020
Students Need More Attention: BERT-based AttentionModel for Small Data with Application to AutomaticPatient Message Triage Shijing Si Rui Wang Jedrek Wosik Hao Zhang D. Dov Guoyin Wang Ricardo Henao Lawrence Carin 136 29 0 22 Jun 2020
A Qualitative Evaluation of Language Models on Automatic Question-Answering for COVID-19 David Oniani Yanshan Wang 165 32 0 19 Jun 2020
Infinite attention: NNGP and NTK for deep attention networks Jiri Hron Yasaman Bahri Jascha Narain Sohl-Dickstein Roman Novak 135 131 0 18 Jun 2020
Towards User Friendly Medication Mapping Using Entity-Boosted Two-Tower Neural Network Shaoqing Yuan Parminder Bhatia B. Celikkaya Haiyang Liu Kyunghwan Choi 145 3 0 17 Jun 2020
Results of the seventh edition of the BioASQ Challenge A. Nentidis K. Bougiatiotis Anastasia Krithara George Giannakopoulos 278 62 0 16 Jun 2020
PERL: Pivot-based Domain Adaptation for Pre-trained Deep Contextualized Embedding Models Eyal Ben-David Carmel Rabinovitz Roi Reichart SSL 202 64 0 16 Jun 2020
Document Classification for COVID-19 Literature Bernal Jiménez Gutiérrez Juncheng Zeng Dongdong Zhang Ping Zhang Yu-Chuan Su OOD 129 32 0 15 Jun 2020
FinBERT: A Pretrained Language Model for Financial Communications Yi Yang Mark Christopher Siy Uy Allen H Huang AIFin AI4CE 220 301 0 15 Jun 2020
Information Extraction of Clinical Trial Eligibility Criteria Yitong Tseo M. Salkola A. Mohamed Anuj Kumar F. Abnousi FaML 215 27 0 12 Jun 2020
Extensive Error Analysis and a Learning-Based Evaluation of Medical Entity Recognition Systems to Approximate User Experience I. Nejadgholi Kathleen C. Fraser Berry de Bruijn 104 16 0 09 Jun 2020
Auxiliary Signal-Guided Knowledge Encoder-Decoder for Medical Report Generation Mingjie Li Fuyu Wang Xiaojun Chang Xiaodan Liang MedIm 197 127 0 06 Jun 2020
DeepVar: An End-to-End Deep Learning Approach for Genomic Variant Recognition in Biomedical Literature Chaoran Cheng Fei Tan Zhi Wei 169 8 0 05 Jun 2020
Neural Unsupervised Domain Adaptation in NLP---A SurveyInternational Conference on Computational Linguistics (COLING), 2020 Alan Ramponi Barbara Plank OOD 319 273 0 31 May 2020
CausaLM: Causal Model Explanation Through Counterfactual Language ModelsInternational Conference on Computational Logic (ICCL), 2020 Amir Feder Nadav Oved Uri Shalit Roi Reichart CML LRM 452 178 0 27 May 2020
BERT-XML: Large Scale Automated ICD Coding Using BERT PretrainingClinical Natural Language Processing Workshop (ClinicalNLP), 2020 Zachariah Zhang Jingshu Liu N. Razavian 125 81 0 26 May 2020
A Data-driven Approach for Noise Reduction in Distantly Supervised Biomedical Relation ExtractionWorkshop on Biomedical Natural Language Processing (BioNLP), 2020 Saadullah Amin K. Dunfield Anna Vechkaeva G. Neumann NoLa MedIm 106 14 0 26 May 2020
Med-BERT: pre-trained contextualized embeddings on large-scale structured electronic health records for disease prediction L. Rasmy Yang Xiang Z. Xie Cui Tao Degui Zhi AI4MH LM&MA 254 835 0 22 May 2020
Extracting Daily Dosage from Medication Instructions in EHRs: An Automated Approach and Lessons Learned Diwakar Mahajan Jennifer J. Liang Ching-Huei Tsou 95 9 0 21 May 2020
Trialstreamer: Mapping and Browsing Medical Evidence in Real-Time Benjamin E. Nye A. Nenkova Iain J. Marshall Byron C. Wallace 91 28 0 21 May 2020
BERTweet: A pre-trained language model for English Tweets Dat Quoc Nguyen Thanh Tien Vu A. Nguyen VLM 265 1,006 0 20 May 2020
COVID-Twitter-BERT: A Natural Language Processing Model to Analyse COVID-19 Content on Twitter Martin Müller M. Salathé P. Kummervold VLM MedIm AI4MH 182 393 0 15 May 2020
Pre-training technique to localize medical BERT and enhance biomedical BERT Shoya Wada Toshihiro Takeda S. Manabe Shozo Konishi Jun Kamohara Y. Matsumura LM&MA 202 18 0 14 May 2020
Entity-Enriched Neural Models for Clinical Question Answering Bhanu Pratap Singh Rawat W. Weng So Yeon Min Preethi Raghavan Peter Szolovits 220 18 0 13 May 2020
Detecting Adverse Drug Reactions from Twitter through Domain-Specific Preprocessing and BERT Ensembling Amy Breden L. Moore 85 15 0 11 May 2020
Comparative Analysis of Text Classification Approaches in Electronic Health Records Aurelie Mascio Z. Kraljevic D. Bean Richard J. B. Dobson Robert Stewart R. Bendayan A. Roberts 143 53 0 08 May 2020
An Empirical Study of Multi-Task Learning on BERT for Biomedical Text MiningWorkshop on Biomedical Natural Language Processing (BioNLP), 2020 Yifan Peng Qingyu Chen Zhiyong Lu 169 124 0 06 May 2020
CAiRE-COVID: A Question Answering and Query-focused Multi-Document Summarization System for COVID-19 Scholarly Information Management Jane Polak Scowcroft Yan Xu Tiezheng Yu Farhad Bin Siddique Elham J. Barezi Pascale Fung RALM 125 31 0 04 May 2020
WikiUMLS: Aligning UMLS to Wikipedia via Cross-lingual Neural RankingInternational Conference on Computational Linguistics (COLING), 2020 Afshin Rahimi Timothy Baldwin Karin Verspoor 186 9 0 04 May 2020
Clinical Reading Comprehension: A Thorough Analysis of the emrQA DatasetAnnual Meeting of the Association for Computational Linguistics (ACL), 2020 Xiang Yue Bernal Jimenez Gutierrez Huan Sun 219 50 0 01 May 2020
Improving Broad-Coverage Medical Entity Linking with Semantic Type Prediction and Large-Scale DatasetsJournal of Biomedical Informatics (JBI), 2020 Shikhar Vashishth Denis R. Newman-Griffis Rishabh Joshi Ritam Dutt Carolyn Rose 229 29 0 01 May 2020
Biomedical Entity Representations with Synonym MarginalizationAnnual Meeting of the Association for Computational Linguistics (ACL), 2020 Mujeen Sung Hwisang Jeon Jinhyuk Lee Jaewoo Kang 221 147 0 01 May 2020
Data and Representation for Turkish Natural Language Inference Emrah Budur Rıza Özçelik Tunga Güngör Christopher Potts 73 1 0 30 Apr 2020
Zero-shot Neural Passage Retrieval via Domain-targeted Synthetic Question Generation Ji Ma I. Korotkov Yinfei Yang Keith B. Hall Ryan T. McDonald RALM 242 32 0 29 Apr 2020
"The Boating Store Had Its Best Sail Ever": Pronunciation-attentive Contextualized Pun RecognitionAnnual Meeting of the Association for Computational Linguistics (ACL), 2020 Yichao Zhou Jyun-Yu Jiang Jieyu Zhao Kai-Wei Chang Wei Wang 127 15 0 29 Apr 2020
Rapidly Bootstrapping a Question Answering Dataset for COVID-19 Raphael Tang Rodrigo Nogueira Edwin Zhang Nikhil Gupta P. Cẩm Dong Wang Jimmy J. Lin 150 73 0 23 Apr 2020
Privacy at Scale: Introducing the PrivaSeer Corpus of Web Privacy Policies Mukund Srinath Shomir Wilson C. Lee Giles PILM 184 59 0 23 Apr 2020
QURIOUS: Question Generation Pretraining for Text Generation Shashi Narayan Gonçalo Simães Ji Ma Hannah Craighead Ryan T. McDonald 148 16 0 23 Apr 2020
Don't Stop Pretraining: Adapt Language Models to Domains and Tasks Suchin Gururangan Ana Marasović Swabha Swayamdipta Kyle Lo Iz Beltagy Doug Downey Noah A. Smith VLM AI4CE CLL 496 2,718 0 23 Apr 2020
CORD-19: The COVID-19 Open Research Dataset Lucy Lu Wang Kyle Lo Yoganand Chandrasekhar Russell Reas Jiangjiang Yang ... Boya Xie Douglas A. Raymond Daniel S. Weld Oren Etzioni Sebastian Kohlmeier 307 846 0 22 Apr 2020
Train No Evil: Selective Masking for Task-Guided Pre-TrainingConference on Empirical Methods in Natural Language Processing (EMNLP), 2020 Yuxian Gu Zhengyan Zhang Xiaozhi Wang Zhiyuan Liu Maosong Sun 242 62 0 21 Apr 2020
CheXbert: Combining Automatic Labelers and Expert Annotations for Accurate Radiology Report Labeling Using BERTConference on Empirical Methods in Natural Language Processing (EMNLP), 2020 Akshay Smit Saahil Jain Pranav Rajpurkar Anuj Pareek A. Ng M. Lungren MedIm 294 419 0 20 Apr 2020
Enhancing Pharmacovigilance with Drug Reviews and Social Media Brent Biseda K. Mo 73 12 0 18 Apr 2020