ResearchTrend.AI
  • Communities
  • Connect sessions
  • AI calendar
  • Organizations
  • Join Slack
  • Contact Sales
Papers
Communities
Social Events
Terms and Conditions
Pricing
Contact Sales
Parameter LabParameter LabTwitterGitHubLinkedInBlueskyYoutube

© 2026 ResearchTrend.AI, All rights reserved.

  1. Home
  2. Papers
  3. 1901.08746
  4. Cited By
BioBERT: a pre-trained biomedical language representation model for
  biomedical text mining
v1v2v3v4 (latest)

BioBERT: a pre-trained biomedical language representation model for biomedical text mining

25 January 2019
Jinhyuk Lee
Wonjin Yoon
Sungdong Kim
Donghyeon Kim
Sunkyu Kim
Chan Ho So
Jaewoo Kang
    OOD
ArXiv (abs)PDFHTMLGithub (689★)

Papers citing "BioBERT: a pre-trained biomedical language representation model for biomedical text mining"

50 / 1,900 papers shown
Enhancing Pharmacovigilance with Drug Reviews and Social Media
Enhancing Pharmacovigilance with Drug Reviews and Social Media
Brent Biseda
K. Mo
89
12
0
18 Apr 2020
Augmented Curation of Unstructured Clinical Notes from a Massive EHR
  System Reveals Specific Phenotypic Signature of Impending COVID-19 Diagnosis
Augmented Curation of Unstructured Clinical Notes from a Massive EHR System Reveals Specific Phenotypic Signature of Impending COVID-19 DiagnosismedRxiv (medRxiv), 2020
F. Shweta
K. Murugadoss
S. Awasthi
A. Venkatakrishnan
Arjun Puranik
...
G. Gores
A. Williams
J. Halamka
V. Soundararajan
A. Badley
99
26
0
17 Apr 2020
Cascade Neural Ensemble for Identifying Scientifically Sound Articles
Cascade Neural Ensemble for Identifying Scientifically Sound Articles
Ashwin Karthik Ambalavanan
M. Devarakonda
92
1
0
13 Apr 2020
Robustly Pre-trained Neural Model for Direct Temporal Relation
  Extraction
Robustly Pre-trained Neural Model for Direct Temporal Relation ExtractionIEEE International Conference on Healthcare Informatics (ICHI), 2020
Hong Guan
Jianfu Li
Hua Xu
M. Devarakonda
112
13
0
13 Apr 2020
Annotating Social Determinants of Health Using Active Learning, and
  Characterizing Determinants Using Neural Event Extraction
Annotating Social Determinants of Health Using Active Learning, and Characterizing Determinants Using Neural Event ExtractionJournal of Biomedical Informatics (JBI), 2020
K. Lybarger
Mari Ostendorf
Meliha Yetisgen
164
78
0
11 Apr 2020
Rapidly Deploying a Neural Search Engine for the COVID-19 Open Research
  Dataset: Preliminary Thoughts and Lessons Learned
Rapidly Deploying a Neural Search Engine for the COVID-19 Open Research Dataset: Preliminary Thoughts and Lessons Learned
Edwin Zhang
Nikhil Gupta
Rodrigo Nogueira
Dong Wang
Jimmy J. Lin
113
59
0
10 Apr 2020
Calibrating Structured Output Predictors for Natural Language Processing
Calibrating Structured Output Predictors for Natural Language ProcessingAnnual Meeting of the Association for Computational Linguistics (ACL), 2020
Abhyuday N. Jagannatha
Hong-ye Yu
345
31
0
09 Apr 2020
CALM: Continuous Adaptive Learning for Language Modeling
CALM: Continuous Adaptive Learning for Language Modeling
Kristjan Arumae
Parminder Bhatia
CLLKELM
67
7
0
08 Apr 2020
The Russian Drug Reaction Corpus and Neural Models for Drug Reactions
  and Effectiveness Detection in User Reviews
The Russian Drug Reaction Corpus and Neural Models for Drug Reactions and Effectiveness Detection in User Reviews
E. Tutubalina
I. Alimova
Z. Miftahutdinov
Andrey Sakhovskiy
Valentin Malykh
Sergey I. Nikolenko
118
46
0
07 Apr 2020
Inexpensive Domain Adaptation of Pretrained Language Models: Case
  Studies on Biomedical NER and Covid-19 QA
Inexpensive Domain Adaptation of Pretrained Language Models: Case Studies on Biomedical NER and Covid-19 QAFindings (Findings), 2020
Nina Poerner
Ulli Waltinger
Hinrich Schütze
OOD
302
53
0
07 Apr 2020
DARE: Data Augmented Relation Extraction with GPT-2
DARE: Data Augmented Relation Extraction with GPT-2
Yannis Papanikolaou
Andrea Pierleoni
146
81
0
06 Apr 2020
Continual Domain-Tuning for Pretrained Language Models
Continual Domain-Tuning for Pretrained Language Models
Subendhu Rongali
Abhyuday N. Jagannatha
Bhanu Pratap Singh Rawat
Hong-ye Yu
CLLKELM
157
7
0
05 Apr 2020
Identifying Radiological Findings Related to COVID-19 from Medical
  Literature
Identifying Radiological Findings Related to COVID-19 from Medical Literature
Yuxiao Liang
P. Xie
77
11
0
04 Apr 2020
Deep Entity Matching with Pre-Trained Language Models
Deep Entity Matching with Pre-Trained Language ModelsProceedings of the VLDB Endowment (PVLDB), 2020
Yuliang Li
Jinfeng Li
Yoshihiko Suhara
A. Doan
W. Tan
VLM
338
445
0
01 Apr 2020
NukeBERT: A Pre-trained language model for Low Resource Nuclear Domain
NukeBERT: A Pre-trained language model for Low Resource Nuclear Domain
Ayush Jain
Meenachi Ganesamoorty
Dr. B. Venkatraman
162
14
0
30 Mar 2020
Named Entities in Medical Case Reports: Corpus and Experiments
Named Entities in Medical Case Reports: Corpus and ExperimentsInternational Conference on Language Resources and Evaluation (LREC), 2020
Sarah Schulz
Jurica vSeva
Samuel Rodriguez
Malte Ostendorff
Georg Rehm
145
8
0
29 Mar 2020
A Survey of Deep Learning for Scientific Discovery
A Survey of Deep Learning for Scientific Discovery
M. Raghu
Erica Schmidt
OODAI4CE
347
141
0
26 Mar 2020
Pre-trained Models for Natural Language Processing: A Survey
Pre-trained Models for Natural Language Processing: A SurveyScience China Technological Sciences (Sci China Technol Sci), 2020
Xipeng Qiu
Tianxiang Sun
Yige Xu
Yunfan Shao
Ning Dai
Xuanjing Huang
LM&MAVLM
1.1K
1,623
0
18 Mar 2020
Parallel sequence tagging for concept recognition
Parallel sequence tagging for concept recognitionBMC Bioinformatics (BB), 2020
Lenz Furrer
Joseph Cornelius
Fabio Rinaldi
111
10
0
16 Mar 2020
Hurtful Words: Quantifying Biases in Clinical Contextual Word Embeddings
Hurtful Words: Quantifying Biases in Clinical Contextual Word EmbeddingsACM Conference on Health, Inference, and Learning (CHIL), 2020
H. Zhang
Amy X. Lu
Mohamed Abdalla
Matthew B. A. McDermott
Marzyeh Ghassemi
259
195
0
11 Mar 2020
Investigating Entity Knowledge in BERT with Simple Neural End-To-End
  Entity Linking
Investigating Entity Knowledge in BERT with Simple Neural End-To-End Entity LinkingConference on Computational Natural Language Learning (CoNLL), 2019
Samuel Broscheit
OCL
276
134
0
11 Mar 2020
Med7: a transferable clinical natural language processing model for
  electronic health records
Med7: a transferable clinical natural language processing model for electronic health records
Andrey Kormilitzin
N. Vaci
Qiang Liu
A. Nevado-Holgado
263
131
0
03 Mar 2020
Parsing Early Modern English for Linguistic Search
Parsing Early Modern English for Linguistic Search
S. Kulick
Neville Ryant
88
2
0
24 Feb 2020
Federated pretraining and fine tuning of BERT using clinical notes from
  multiple silos
Federated pretraining and fine tuning of BERT using clinical notes from multiple silos
Dianbo Liu
Timothy A. Miller
AI4MH
144
38
0
20 Feb 2020
The Microsoft Toolkit of Multi-Task Deep Neural Networks for Natural
  Language Understanding
The Microsoft Toolkit of Multi-Task Deep Neural Networks for Natural Language UnderstandingAnnual Meeting of the Association for Computational Linguistics (ACL), 2020
Xiaodong Liu
Yu Wang
Jianshu Ji
Hao Cheng
Xueyun Zhu
...
Pengcheng He
Weizhu Chen
Hoifung Poon
Guihong Cao
Jianfeng Gao
AI4CE
182
62
0
19 Feb 2020
The Utility of General Domain Transfer Learning for Medical Language
  Tasks
The Utility of General Domain Transfer Learning for Medical Language Tasks
D. Ranti
Katie Hanss
Shan Zhao
Varun Arvind
J. Titano
A. Costa
Eric Oermann
LM&MAMedIm
130
8
0
16 Feb 2020
Automated Labelling using an Attention model for Radiology reports of
  MRI scans (ALARM)
Automated Labelling using an Attention model for Radiology reports of MRI scans (ALARM)International Conference on Medical Imaging with Deep Learning (MIDL), 2020
D. Wood
J. Lynch
S. Kafiabadi
Emily Guilhem
A. A. Busaidi
...
Keena Patel
Gareth J. Barker
S. Ourselin
James H. Cole
Thomas C Booth
MedIm
160
43
0
16 Feb 2020
CBAG: Conditional Biomedical Abstract Generation
CBAG: Conditional Biomedical Abstract GenerationPLoS ONE (PLOS ONE), 2020
Justin Sybrandt
Ilya Safro
MedImAI4CE
146
10
0
13 Feb 2020
Snippext: Semi-supervised Opinion Mining with Augmented Data
Snippext: Semi-supervised Opinion Mining with Augmented DataThe Web Conference (WWW), 2020
Zhengjie Miao
Yuliang Li
Xiaolan Wang
W. Tan
RALMVLM
142
93
0
07 Feb 2020
UNCC Biomedical Semantic Question Answering Systems. BioASQ: Task-7B,
  Phase-B
UNCC Biomedical Semantic Question Answering Systems. BioASQ: Task-7B, Phase-B
Sai Krishna Telukuntla
Aditya Kapri
Wlodek Zadrozny
100
9
0
05 Feb 2020
Learning Contextualized Document Representations for Healthcare Answer
  Retrieval
Learning Contextualized Document Representations for Healthcare Answer RetrievalThe Web Conference (WWW), 2020
Sebastian Arnold
Betty van Aken
Paul Grundmann
Felix Alexander Gers
Alexander Loser
124
15
0
03 Feb 2020
Explaining Relationships Between Scientific Documents
Explaining Relationships Between Scientific DocumentsAnnual Meeting of the Association for Computational Linguistics (ACL), 2020
Kelvin Luu
Xinyi Wu
Rik Koncel-Kedziorski
Kyle Lo
Isabel Cachola
Noah A. Smith
366
55
0
02 Feb 2020
PoWER-BERT: Accelerating BERT Inference via Progressive Word-vector
  Elimination
PoWER-BERT: Accelerating BERT Inference via Progressive Word-vector Elimination
Saurabh Goyal
Anamitra R. Choudhury
Saurabh ManishRaje
Venkatesan T. Chakaravarthy
Yogish Sabharwal
Ashish Verma
345
19
0
24 Jan 2020
MT-BioNER: Multi-task Learning for Biomedical Named Entity Recognition
  using Deep Bidirectional Transformers
MT-BioNER: Multi-task Learning for Biomedical Named Entity Recognition using Deep Bidirectional Transformers
Muhammad Raza Khan
Morteza Ziyadi
M. Abdelhady
MedIm
108
48
0
24 Jan 2020
AutoDiscern: Rating the Quality of Online Health Information with
  Hierarchical Encoder Attention-based Neural Networks
AutoDiscern: Rating the Quality of Online Health Information with Hierarchical Encoder Attention-based Neural NetworksBMC Medical Informatics and Decision Making (BMC Med Inform Decis Mak), 2019
Laura Kinkead
Ahmed Allam
Michael Krauthammer
226
25
0
30 Dec 2019
End-to-end Named Entity Recognition and Relation Extraction using
  Pre-trained Language Models
End-to-end Named Entity Recognition and Relation Extraction using Pre-trained Language Models
John Giorgi
Xindi Wang
Nicola Sahar
W. Shin
Gary D. Bader
Bo Wang
167
40
0
20 Dec 2019
Multilingual is not enough: BERT for Finnish
Multilingual is not enough: BERT for Finnish
Antti Virtanen
Jenna Kanerva
Rami Ilo
Jouni Luoma
Juhani Luotolahti
T. Salakoski
Filip Ginter
S. Pyysalo
250
300
0
15 Dec 2019
Extracting clinical concepts from user queries
Extracting clinical concepts from user queries
Yue Zhao
J. Handley
121
1
0
12 Dec 2019
Self-Supervised Contextual Language Representation of Radiology Reports
  to Improve the Identification of Communication Urgency
Self-Supervised Contextual Language Representation of Radiology Reports to Improve the Identification of Communication Urgency
Xing Meng
C. Ganoe
R. Sieberg
Yvonne Y. Cheung
Saeid Hassanpour
MedIm
127
13
0
05 Dec 2019
EduBERT: Pretrained Deep Language Models for Learning Analytics
EduBERT: Pretrained Deep Language Models for Learning Analytics
Benjamin Clavié
K. Gal
95
19
0
02 Dec 2019
Integrating Graph Contextualized Knowledge into Pre-trained Language
  Models
Integrating Graph Contextualized Knowledge into Pre-trained Language ModelsFindings (Findings), 2019
Bin He
Di Zhou
Jinghui Xiao
Xin jiang
Qun Liu
Nicholas Jing Yuan
Tong Xu
AI4CE
303
90
0
30 Nov 2019
Chemical-protein Interaction Extraction via Gaussian Probability
  Distribution and External Biomedical Knowledge
Chemical-protein Interaction Extraction via Gaussian Probability Distribution and External Biomedical Knowledge
Cong Sun
Zhihao Yang
Leilei Su
Lei Wang
Yin Zhang
Hongfei Lin
Jian Wang
115
28
0
21 Nov 2019
Evaluating robustness of language models for chief complaint extraction
  from patient-generated text
Evaluating robustness of language models for chief complaint extraction from patient-generated text
Ilya Valmianski
Caleb Goodwin
Ian M. Finn
Naqi Khan
D. Zisook
89
8
0
15 Nov 2019
Leveraging Dependency Forest for Neural Medical Relation Extraction
Leveraging Dependency Forest for Neural Medical Relation ExtractionConference on Empirical Methods in Natural Language Processing (EMNLP), 2019
Linfeng Song
Yue Zhang
D. Gildea
Mo Yu
Zhiguo Wang Jinsong Su
Jinsong Su
MedIm
212
35
0
11 Nov 2019
Knowledge Guided Named Entity Recognition for BioMedical Text
Knowledge Guided Named Entity Recognition for BioMedical Text
Pratyay Banerjee
Kuntal Kumar Pal
M. Devarakonda
Chitta Baral
227
0
0
10 Nov 2019
Discovering Invariances in Healthcare Neural Networks
Discovering Invariances in Healthcare Neural Networks
M. T. Bahadori
Layne Price
OOD
214
0
0
08 Nov 2019
Towards Domain Adaptation from Limited Data for Question Answering Using
  Deep Neural Networks
Towards Domain Adaptation from Limited Data for Question Answering Using Deep Neural Networks
Timothy J. Hazen
Shehzaad Dhuliawala
Daniel Boies
OOD
173
19
0
06 Nov 2019
Unsupervised Domain Adaptation of Contextual Embeddings for Low-Resource
  Duplicate Question Detection
Unsupervised Domain Adaptation of Contextual Embeddings for Low-Resource Duplicate Question Detection
Alexandre Rochette
Yadollah Yaghoobzadeh
Timothy J. Hazen
157
10
0
06 Nov 2019
How to Pre-Train Your Model? Comparison of Different Pre-Training Models
  for Biomedical Question Answering
How to Pre-Train Your Model? Comparison of Different Pre-Training Models for Biomedical Question Answering
S. Kamath
Brigitte Grau
Yue Ma
AI4MH
103
7
0
02 Nov 2019
BERT Goes to Law School: Quantifying the Competitive Advantage of Access
  to Large Legal Corpora in Contract Understanding
BERT Goes to Law School: Quantifying the Competitive Advantage of Access to Large Legal Corpora in Contract Understanding
Emad Elwany
David A. Moore
Gaurav Oberoi
AILawELM
182
36
0
01 Nov 2019
Previous
123...363738
Next